Multidimensional stoichiometric mismatch explains differences in detritivore biomass across three forest types.

The ecological stoichiometry theory provides a framework to understand organism fitness and population dynamics based on stoichiometric mismatch between organisms and their resources. Recent studies have revealed that different soil animals occupy distinct multidimensional stoichiometric niches (MSNs), which likely determine their specific stoichiometric mismatches and population responses facing resource changes. The goals of the present study are to examine how long-term forest plantations affect multidimensional elemental contents of litter and detritivores and the population size of detritivores that occupy distinct MSNs. We evaluated the contents of 10 elements of two detritivore taxa (lumbricid earthworms and julid millipedes) and their litter resources, quantified their MSNs and the multidimensional stoichiometric mismatches, and examined how such mismatch patterns influence the density and total biomass of detritivores across three forest types spanning from natural forests (oak forest) to plantations (pine and larch forests). Sixty-year pine plantations changed the multidimensional elemental contents of litter, but did not influence the elemental contents of the two detritivore taxa. Earthworms and millipedes exhibited distinct patterns of MSNs and stoichiometric mismatches, but they both experienced severer stoichiometric mismatches in pine plantations than in oak forests and larch plantations. Such stoichiometric mismatches led to lower density and biomass of both earthworms and millipedes in pine plantations. In other words, under conditions of low litter quality and severe stoichiometric mismatches in pine plantations, detritivores maintained their body elemental contents but decreased their population biomass. Our study illustrates the success in using the multidimensional stoichiometric framework to understand the impact of forest plantations on animal population dynamics, which may serve as a useful tool in addressing ecosystem responses to global environmental changes.

Insights into the Role of the Fungal Community in Variations of the Antibiotic Resistome in the Soil Collembolan Gut Microbiome.

Fertilization is known to affect antibiotic-resistance gene (ARG) patterns in the soil, even in the gut of soil fauna. Here, we conducted a microcosm experiment to investigate differences of effects of different fertilizers on collembolan gut ARG profiles and to further explore the microecological mechanisms that cause the differences. Although fertilization increased the abundance of ARGs, compared with the conventional manure, the application of antibiotic-reduced manure and vermicompost all curbed the enrichment of ARGs in the gut of collembolans. The results of the structural equation model revealed that changes in the microbial community caused by fertilizations have an important contribution to variations in the ARGs. We further found that the fungal community, like bacterial community, is also an important driver of ARG patterns in the collembolan gut. The fungi belonging to Dokmaia and Talaromyces were significantly correlated with the ARGs in the gut of collembolans. In addition, the application of vermicompost significantly increased the abundance of agricultural beneficial microbes in the soil environment. Together, our results provide an insight into the role of the fungal community on ARG patterns in the soil collembolan gut microbiome and highlight environmental friendliness of vermicomposting.

Population asynchrony alone does not explain stability in species-rich soil animal assemblages: The stabilizing role of forest age on oribatid mite communities.

The importance of microbial and plant communities in the control of the diversity and structure of soil animal communities has been clarified over the last decade. Previous research focused on abiotic factors, niche separation and spatial patterns. Significant gaps still exist in our knowledge of the factors that control the stability of these communities over time. We analysed a 9-year dataset from the national Long-term Ecological Research Network of Latvia. We focused on 117 oribatid species from three Scots pine forests of different age (<40, 65 and >150 years) and structure. For each forest type, 100 samples were collected each year, providing very high replication and long time series for a soil community. We assessed different aspects of stability: we used a dynamic null model, parameterized on observed growth rates, to test the hypothesis that asynchrony in species populations stabilizes total community size; we also analysed alpha and beta diversity over time to test the hypothesis that temporal variation in species composition and relative abundances is controlled by forest attributes. Real communities can be more stable than their stochastic counterparts if species are asynchronous, confirming for the first time the role of asynchrony in stabilizing soil communities. Yet, while some real communities were more stable and had higher abundance and growth rates than others, they were not necessarily more asynchronous than the less stable communities. Species composition and relative abundances were also less variable in the more stable communities. Species asynchrony generally stabilizes species-rich communities but is not sufficient to explain the different levels of stability between forests. Forest age is a key factor explaining the different levels of overyielding and so stability. Data suggest that both asynchrony and high diversity of microhabitat structure of Scots pine forests promote the stability of soil animal communities.

Fatty acid metabolism in an oribatid mite: de novo biosynthesis and the effect of starvation.

The fatty acid (FA) composition of lipids in animals is influenced by factors such as species, life stage, availability and type of food, as well as the ability to synthesize certain FAs de novo. We investigated the effect of starvation on the neutral lipid (NLFA) and phospholipid (PLFA) fatty acid patterns of the oribatid mite Archegozetes longisetosus Aoki. Furthermore, we performed stable-isotope labeled precursors feeding experiments under axenic conditions to delineate de novo FA synthesis by profiling 13C and deuterium incorporation via single-ion monitoring. Starvation of mites resulted in a decline in the total amount of NLFAs and significantly changed the fatty acid patterns, indicating that NLFAs were metabolized selectively. Biochemical tracer experiments confirmed that oribatid mites, like other animals, can produce stearic (18:0) and oleic acid (18:1ω9) de novo. Mass spectrometric data also revealed that they appear to synthesize linoleic acid [18:2ω6,9 = (9Z,12Z)-octadeca-9,12-dienoic acid]-an ability restricted only to a few arthropod taxa, including astigmatid mites. The physiological and biosynthesis processes revealed here are crucial to understand the potential biomarker function of fatty acids-especially 18:2ω6,9-in oribatid mites and their applicability in soil animal food web studies.

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Functional traits are indicators of the responses and adaptation of organisms to environmental changes and cascade to a series of ecosystem functions. The functional traits of soil animals are sensitive to environmental factors and may characterize and predict the changes of ecosystem functions. Multiple dimensions of biodiversity that combing species, phylogenetic, and functional diversity improves the understanding of distribution patterns, community assembly mechanisms and ecosystem functions of soil animals. In this review, we listed the categories of soil animal functional traits and their ecological significance, and summarized current researches on the responses of soil animal communities to environmental changes and the community assembly processes based on trait-based approaches. We proposed to strengthen the study on the impacts of eco-evolution processes of biotic interactions to soil animal functional traits, establish the database of soil animal functional traits, and apply trait-based approaches in the ecological restoration in the future, which would benefit soil biodiversity conservation and sustainability of soil ecosystems.

Cyanobacterial and moss biocrusts shape soil nematode community in dryland mountain ecosystems with increasing aridity.

Soil nematodes are the most abundant animals on Earth and play critical roles in regulating numerous ecosystem processes, from enhancing primary productivity to mineralizing multiple nutrients. In dryland soils, a rich community of microphyte organisms (biocrusts) provide critical habitats for soil nematodes, but their presence is being threatened by increasing aridity induced by global climate change. Despite its importance, how types of biocrusts and aridity index influence soil nematode community in dryland mountain ecosystems remains largely unknown. To fill these knowledge gaps, we conducted a field survey with contrasting aridity indexes (0.2, 0.4, and 0.6) and three types of biocrusts (cyanobacterial, cyanobacterial-moss mixed, and moss crusts) in the topsoil (0-5 cm) from the northern Chinese Loess Plateau. We found that the abundance (number of individuals per gram of soil), richness (number of Operational Taxonomic Units; OTUs), and diversity (number of different species) of soil nematodes were remarkably higher under biocrusts than in bare soils, regardless of aridity index and types of biocrusts. Our results also showed that the same variables had the highest values in moss crusts compared to cyanobacterial and cyanobacterial-moss mixed crusts. Structural equation modelling further revealed that biocrust types and traits (i.e., biocrust thickness, chlorophyll content, shear force, and penetration resistance) are the most important factors associated with both nematode abundance and richness. Together, our findings indicate that biocrusts, especially moss cover, and less stressful aridity conditions favor soil nematodes community in dryland mountain regions. Such knowledge is critical for anticipating the distribution of these animals under climate change scenarios and, ultimately, the numerous ecosystem services supported by soil nematodes.

[Responses of taxonomic and functional diversity of soil mites to altitudinal changes in forest ecosystems of Lyuliang Mountains, Shanxi, China]. / å•æ¢å±±æ£®æž—ç”Ÿæ€ç³»ç»ŸåœŸå£¤èž¨ç±»ç‰©ç§å¤šæ ·æ€§å’ŒåŠŸèƒ½å¤šæ ·æ€§å¯¹æµ·æ‹”æ¢¯åº¦çš„å“åº”.

The altitudinal gradient pattern of mountain biodiversity and its formation mechanism are hot topics in ecological research. The altitudinal variations of belowground invertebrates are less understood than aboveground plants and animals. With soil mites as the model soil animals, we investigated their distribution patterns from 1318 m to 2500 m above sea level in three mountains of Lyuliang Mountains based on species diversity and functional diversity. We used soil pH, total N, total P, total K, and organic matter content to identify potential drivers of soil mite communities and diversity along the altitudinal gradient. A total of 715 soil mites were collected, belonging to 3 orders, 27 families, 28 genera, and 29 species. Phthiracarus clemens, Geolaelaps praesternalis and Diapterobates humeralis were dominant mites. Non-metric multidimensional scaling showed that soil mites community composition varied significantly among different altitudes due to Epilohmannia ovata predominated in high altitude and P. clemens predominated in middle altitude. There were significant differences in individual density of soil mites among different altitudes. The Margalef, Shannon, and Simpson indices followed a unimodal distribution pattern along the altitudinal gradient. Functional richness and functional evenness showed a unimodal distribution pattern along the altitudinal gradient, while other functional diversity indices changed little with altitude. The RDA results indicated that total K and soil pH were the major drivers for the variations in soil mite communities. The Pielou index of soil mites was significantly positively correlated with soil pH, while functional evenness was negatively correlated with altitude. Individual density, species number, Margalef, Simpson and Shannon indices were significantly positively correlated with functional richness index. Species diversity and functional diversity of soil mites varied differently with altitude. In the future, we should strengthen long-term monitoring and dynamic functional properties of soil mites and the community assembly to deeply understand the relationship between biodiversity and ecosystem functions.

Drivers of Collembola assemblages along an altitudinal gradient in northeast China.

Altitudinal changes in the diversity of plants and animals have been well documented; however, soil animals received little attention in this context and it is unclear whether their diversity follows general altitudinal distribution patterns. Changbai Mountain is one of few well-conserved mountain regions comprising natural ecosystems on the Eurasian continent. Here, we present a comprehensive analysis of the diversity and community composition of Collembola along ten altitudinal sites representing five vegetation types from forest to alpine tundra. Among 7834 Collembola individuals, 84 morphospecies were identified. Species richness varied marginally significant with altitude and generally followed a unimodal relationship with altitude. By contrast, the density of Collembola did not change in a consistent way with altitude. Collembola communities changed gradually with altitude, with local habitat-related factors (soil and litter carbon-to-nitrogen ratio, litter carbon content, and soil pH) and climatic variables (precipitation seasonality) identified as major drivers of changes in Collembola community composition. Notably, local habitat-related factors explained more variation in Collembola assemblages than climatic variables. The results suggest that local habitat-related factors including precipitation and temperature are the main drivers of changes in Collembola communities with altitude. Specifically, soil and litter carbon-to-nitrogen ratio correlated positively with Collembola communities at high altitudes, whereas soil pH correlated positively at low altitudes. This documents that altitudinal gradients provide unique opportunities for identifying factors driving the community composition of not only above- but also belowground invertebrates.

Carbendazim shapes microbiome and enhances resistome in the earthworm gut.

BACKGROUND: It is worrisome that several pollutants can enhance the abundance of antibiotic resistance genes (ARGs) in the environment, including agricultural fungicides. As an important bioindicator for environmental risk assessment, earthworm is still a neglected focus that the effects of the fungicide carbendazim (CBD) residues on the gut microbiome and resistome are largely unknown. In this study, Eisenia fetida was selected to investigate the effects of CBD in the soil-earthworm systems using shotgun metagenomics and qPCR methods. RESULTS: CBD could significantly perturb bacterial community and enrich specific bacteria mainly belonging to the phylum Actinobacteria. More importantly, CBD could serve as a co-selective agent to elevate the abundance and diversity of ARGs, particularly for some specific types (e.g., multidrug, glycopeptide, tetracycline, and rifamycin resistance genes) in the earthworm gut. Additionally, host tracking analysis suggested that ARGs were mainly carried in some genera of the phyla Actinobacteria and Proteobacteria. Meanwhile, the level of ARGs was positively relevant to the abundance of mobile genetic elements (MGEs) and some representative co-occurrence patterns of ARGs and MGEs (e.g., cmx-transposase and sul1-integrase) were further found on the metagenome-assembled contigs in the CBD treatments. CONCLUSIONS: It can be concluded that the enhancement effect of CBD on the resistome in the earthworm gut may be attributed to its stress on the gut microbiome and facilitation on the ARGs dissemination mediated by MGEs, which may provide a novel insight into the neglected ecotoxicological risk of the widely used agrochemicals on the gut resistome of earthworm dwelling in soil. Video abstract.

The ecological clusters of soil organisms drive the ecosystem multifunctionality under long-term fertilization.

Long-term fertilization is known to impact the biodiversity and community structures of soil organisms, which are responsible for multiple soil ecosystem functions (multifunctionality). However the relationship between the alterations of soil organisms and ecosystem multifunctionality remains unclear, especially in the case of long-term fertilization. To explore the contribution of soil organismal biodiversity and community structures to ecosystem multifunctionality, we took soil samples from a nearly 25-year field fertilization experiment. Organic matter significantly improved the soil ecosystem multifunctionality. Ecosystem multifunctionality was found to be closely linked to the biodiversity and communities of soil organisms within the major ecological clustering of soil organisms (Module 1) according to the trophic co-occurrence network, rather than the entire community of soil organisms. This indicated that ecological clusters of soil organisms within the network were critical in maintaining soil ecosystem multifunctionality. The application of organic fertilization could enrich specialized soil organisms and increase interactions of soil organisms in the ecological cluster. As a result, our findings emphasize the role of ecological clusters in the soil organismal co-occurrence network in controlling soil multifunctionality after long-term fertilization, presenting a novel perspective on the link between soil biodiversity and ecosystem multifunctionality.

[Characteristics of soil animal community with different garden plants and various planting periods in Wenjiang District, Chengdu, China]. / æˆéƒ½å¸‚æ¸©æ±ŸåŒºä¸åŒæ ½æ¤å¹´é™å›­æž—æ¤ç‰©åœŸå£¤åŠ¨ç‰©ç¾¤è½ç‰¹å¾.

In order to provide scientific guidance for soil quality evaluation and optimum management of flower and seedling industry, we investigated the characteristics of soil animal community with different garden plants and various planting periods in Wenjiang District, Chengdu. A total of 10258 soil animals belonging to 26 orders and 78 families were captured in four sampling times. There were significant differences in the taxonomic richness in the plots with different garden plants, generally highest in plots with Loropetalum chinense var. rubrum or Ginkgo biloba and lowest in plot with Zoysia japonica. The taxonomic richness was lower in the plots with different garden plants than the control. Taxonomic richness and abundance of soil fauna in Osmanthus fragrans plot did not change across sampling seasons. The abundance but not taxonomic richness of soil fauna in other plots had obvious seasonal variations. Different garden plants and various planting periods significantly influenced soil faunal diversity indices. Density-group index (DG) and Margalef richness index (D) in G. biloba plot, as well as Shannon diversity index (H) and D index in Z. japonica plot decreased significantly with the increases of planting period. The DG and D indices of soil animals in O. fragrans plot increased significantly with increasing planting period. The indices of soil animal diversity in L. chinense var. rubrum plot did not change regularly with planting period. The DG, D, and H indices were lowest in O. fragrans plot with different planting periods. Results of hierarchical clustering and canonical correlation analyse (CCA) indicated that garden plant species had stronger effects on the habitat than planting period. Responses of soil fauna to various habitats were different, with available P and soil pH having stronger effects on soil fauna. Our results indicated that soil animal community shifted with the changes of garden plant and planting period as well as management and cultivation methods. Excessive human interference and monoculture had negative effects on soil animal community and caused soil degradation.

Soil drainage facilitates earthworm invasion and subsequent carbon loss from peatland soil.

1. Human activities have been a significant driver of environmental changes with tremendous consequences for carbon dynamics. Peatlands are critical ecosystems because they store ~30% of the global soil organic carbon pool and are particularly vulnerable to anthropogenic changes. The Zoige peatland on the eastern Tibet Plateau, as the largest alpine peatland in the world, accounts for 1‰ of global peat soil organic carbon storage. However, this peatland has experienced dramatic climate change including increased temperature and reduced precipitation in the past decades, which likely is responsible for a decline of the water table and facilitated earthworm invasion, two major factors reducing soil organic carbon (SOC) storage of peatlands. 2. Because earthworms are often more active in low- than in high- moisture peatlands, we hypothesized that the simultaneous occurrence of water table decline and earthworm invasion would synergistically accelerate the release of SOC from peatland soil. We conducted a field experiment with a paired split-plot design, i.e. presence vs. absence of the invasive earthworms (Pheretima aspergillum) nested in drained vs. undrained plots, respectively, for three years within the homogenous Zoige peatland. 3. Water table decline significantly decreased soil water content and bulk density, resulting in a marked reduction of SOC storage. Moreover, consistent with our hypothesis, earthworm presence dramatically reduced SOC in the drained but not in the undrained peatland through the formation of deep burrows and decreasing bulk density of the lower soil layer over three years. The variation in SOC likely was due to changes in aboveground plant biomass, root growth, and earthworm behavior induced by the experimental treatments. 4. Synthesis and applications. We suggest that incentive measures should be taken to prevent further water table decline and earthworm invasion for maintaining the soil C pool in Zoige peatland. Artificial filling of drainage canals should be implemented to increase the water table level, facilitating the recovery of drained peatlands. Moreover, the dispersal of earthworms and their cocoons attached to the roots of crop plants and tree saplings from low-lying areas to the Zoige region should be controlled and restricted.

[Effects of grazing on the composition of soil animals and their decomposition function to Stipa grandis litter in Inner Mongolia typical steppe, China.] / æ”¾ç‰§å¯¹å† è’™å¤å ¸åž‹è‰åŽŸå¤§é’ˆèŒ å‡‹è½ç‰©ä¸­åœŸå£¤åŠ¨ç‰©ç»„æˆåŠå ¶åˆ†è§£åŠŸèƒ½çš„å½±å“.

Grazing has been considered to be an important factor determining the composition of soil animals and decomposition of leaf litter in grassland ecosystem. Sampling plots were selected in ungrazed grassland, grazed grassland and sandy land. Litter bags were used to compare the changes of physicochemical properties of Stipa grandis litter and the composition of soil fauna in the process of the litter decomposition in Baiyinxile, Inner Mongolia, since 2010 to 2012. A total number of 67056 soil animals were captured, belonging to five phyla and eight classes, including 23 families of mites and 19 families of insects. After 780 days' decomposition, the loss of the organic matter of S. grandis litter was from 92.5% to 40.0% in the ungrazed grassland, and to 41.3% in the grazed grassland, with no significant difference observed. However, there was a significant difference (P<0.05) between the ratio of litter residues of the ungrazed grassland (50.0%) and that of the grazed grassland (23.0%). The abundance of soil animals in the residual litters was significantly decreased in the grazed grassland compared to the ungrazed grassland. When the litter was moved into the sandy land, the decomposition rate of organic matter in the residual litter was not significant changed but the ratio of litter residue declined significantly, and the composition of mite community in the resi-dual litter changed significantly. Our results illustrated that grazing activity could affect the composition and abundance of soil fauna in temperate grassland, but slightly influenced the decomposition of organic matter. Therefore, soil animals had relatively weak direct effects on the decomposition of litter in this semi-arid region.

Latitudinal variation in nematode diversity and ecological roles along the Chinese coast.

AIM: To test changes in the phylogenetic relatedness, niche breadth, and life-history strategies of nematodes along a latitudinal gradient. LOCATION: Sixteen wetland locations along the Pacific coast of China, from 20°N to 40°N. METHODS: Linear regression was used to relate nematode phylogenetic relatedness (average taxonomic distinctness (AvTD) and average phylogenetic diversity [AvPD]), life-history group (based on "c-p" colonizer-persister group classification), and dietary specificity (based on guild classification of feeding selectivity) to latitude. RESULTS: Wetland nematode taxonomic diversity (richness and Shannon diversity indices) decreased with increasing latitude along the Chinese coast. Phylogenetic diversity indices (AvTD and AvPD) significantly increased with increasing latitude. This indicates that at lower latitudes, species within the nematode community were more closely related. With increasing latitude, the nematode relative richness and abundance decreased for selective deposit feeders but increased for nonselective deposit feeders. The proportion of general opportunists decreased with increasing latitude, but persisters showed the opposite trend. The annual temperature range and the pH of sediments were more important than vegetation type in structuring nematode communities. MAIN CONCLUSION: Nematode niche breadth was narrower at lower latitudes with respect to dietary specificity. Higher latitudes with a more variable climate favor r over K life-history strategists. Nematode communities at lower latitudes contained more closely related species.