RESUMO
Polyunsaturated fatty acids (PUFAs) are essential lipids for cell function, normal growth, and development, serving as key structural components of biological membranes and modulating critical signal transduction events. Omega-3 (n-3) long chain PUFAs (LC-PUFAs) such as eicosapentaenoic acid (EPA) and docosahexaenoic acid (DHA) have been shown to protect against inflammatory diseases and enhance brain development and function. This had led to a marked increase in demand for fish and fish oils in human diets, supplements, and aquaculture and created a need for new, sustainable n-3 LC-PUFA sources. We have studied for the first time homogenous preparations of the membrane-type ω6 and ω3 fatty acid desaturases from the fungus Mortierella alpina, as a model system to produce PUFAs. These desaturases possess a di-iron metal center and are selective for 18:1 n-9 and 18:2 n-6 acyl-CoA substrates, respectively. Sequence alignments and membrane topology predictions support that these enzymes have unique cap regions that may include the rearrangement and repositioning of the active site, especially when compared to the mammalian stearoyl-coenzyme A desaturase-1 (SCD1) and the related sphingolipid α-hydroxylase (Scs7p) that act upon different substrates.
Assuntos
Ácidos Graxos Dessaturases/química , Ácidos Graxos Dessaturases/metabolismo , Ácidos Graxos Insaturados/biossíntese , Mortierella/enzimologia , Sequência de Aminoácidos , Citocromo-B(5) Redutase/genética , Citocromo-B(5) Redutase/isolamento & purificação , Citocromo-B(5) Redutase/metabolismo , Citocromos b/genética , Citocromos b/isolamento & purificação , Citocromos b/metabolismo , Ácidos Graxos Dessaturases/genética , Ácidos Graxos Dessaturases/isolamento & purificação , Ácidos Graxos Ômega-3/metabolismo , Ácidos Graxos Ômega-6/metabolismo , Humanos , Ferro/química , Cinética , Membranas/química , Membranas/enzimologia , Mortierella/classificação , Mortierella/genética , Filogenia , Especificidade por SubstratoRESUMO
Prokaryotic cells, including cyanobacteria, respond to a decrease in ambient temperature by activation of numerous cold shock genes. Low temperatures cause a decrease in membrane fluidity, which is maintained at some optimal level mainly by fatty acid (FA) desaturases. Here, temperature-dependent expression of the desB gene for the omega3-desaturase in Synechocystis, which synthesized polyunsaturated FAs, and in its mutant, desA-/desD-, which is defective in genes for delta12- and delta6-desaturases and is capable of synthesizing only monounsaturated FAs was studied. Low temperatures caused the increase in the amount of the desB mRNA in the wild-type cells with the maximum observed at 24 degrees C. In the double mutant desA-/desD- cells, the maximum amount of this mRNA was accumulated at 28-30 degrees C. Thus, our studies of the desB gene for the omega3-desaturase demonstrated that temperature-dependent expression of genes, which are responsible for the maintenance of the optimal membrane fluidity, depends on physical state of these membranes and is regulated by a feedback mode.
Assuntos
Cianobactérias/genética , Cianobactérias/metabolismo , Ácidos Graxos Dessaturases/genética , Ácidos Graxos Dessaturases/metabolismo , Cianobactérias/fisiologia , Ácidos Graxos Dessaturases/isolamento & purificação , Ácidos Graxos Ômega-3/biossíntese , Ácidos Graxos Ômega-3/genética , Retroalimentação Fisiológica , Regulação da Expressão Gênica/fisiologia , Fluidez de Membrana/genética , Fluidez de Membrana/fisiologia , Mutação , TemperaturaRESUMO
The gene encoding human ß-carotene-9',10'-oxygenase, which cleaves the 9',10' double bond in ß-carotene into ß-apo-10'-carotenal, was cloned and expressed in Escherichia coli. Under aqueous conditions, the optimum organic solvent for the formation of detergent micelles was toluene. The optimum pH, temperature, detergent type, and the optimum concentrations of detergent, substrate, and enzyme for ß-apo-10'-carotenal production were 8.0, 37°C, Tween 40, 2.4%, 300 mg ß-carotene/l, and 0.25 U/ml, respectively. Under the optimum conditions, 43 mg ß-apo-10'-carotenal/l was produced after 21 h with a conversion of 14%. This is the first report to describe the enzymatic production of ß-apo-10'carotenal.
Assuntos
Carotenoides/biossíntese , Ácidos Graxos Dessaturases/genética , Ácidos Graxos Dessaturases/metabolismo , beta Caroteno/metabolismo , Biotecnologia , Clonagem Molecular , Detergentes , Dioxigenases , Escherichia coli/genética , Escherichia coli/metabolismo , Ácidos Graxos Dessaturases/isolamento & purificação , Humanos , Concentração de Íons de Hidrogênio , Técnicas In Vitro , Cinética , Micelas , Proteínas Recombinantes/genética , Proteínas Recombinantes/metabolismo , Solventes , TemperaturaRESUMO
Here we describe a protocol for a one-step purification of a soluble form of human FAD synthase (isoform 2; hFADS2), overexpressed as a 6-His-tagged fusion protein in Escherichia coli, with a yield of about 15 mg from 1 L of transformed bacterial culture.Following a desalting procedure, the protein is obtained in its FAD-bound form (about 0.8 molecules of FAD per 1 protein monomer). A simple method is also proposed here, for the rapid estimation of the [FAD ]/[protein monomer] ratio, starting from the typical flavoprotein spectrum of the purified protein fraction.The procedure described gives the protein at a quite high grade of purity (about 95%) and in its bifunctional (2.7.7.2/3.6.1.18) enzymatically active form, useful for further kinetical and molecular characterization.
Assuntos
Escherichia coli/crescimento & desenvolvimento , Ácidos Graxos Dessaturases/genética , Proteínas Recombinantes/isolamento & purificação , Cromatografia de Afinidade , Clonagem Molecular , Dessaturase de Ácido Graxo Delta-5 , Escherichia coli/genética , Escherichia coli/metabolismo , Ácidos Graxos Dessaturases/isolamento & purificação , Ácidos Graxos Dessaturases/metabolismo , Humanos , Multimerização Proteica , Proteínas Recombinantes/metabolismoRESUMO
Riboflavin, or vitamin B2, is the precursor of flavin mononucleotide (FMN) and flavin adenine dinucleotide (FAD), essential redox (and sometimes non-redox) cofactors of a large number of flavoenzymes involved in energetic metabolism, protein folding, apoptosis, chromatin remodeling, and a number of other cell regulatory processes.The cellular and subcellular steady-state concentrations of flavin cofactors, which are available for flavoprotein biogenesis and assembly, depend on carrier-mediated transport processes and on coordinated synthesizing/destroying enzymatic activities, catalyzed by enzymes whose catalytic and structural properties are still matter of investigation.Alteration of flavin homeostasis has been recently correlated to human pathological conditions, such as neuromuscular disorders and cancer, and therefore we propose here protocols useful to detect metabolic processes involved in FAD forming and destroying.Our protocols exploit the chemical-structural differences between riboflavin, FMN , and FAD , which are responsible for differences in the spectroscopic properties (mainly fluorescence) of the two cofactors (FMN and FAD); therefore, in our opinion, when applicable measurements of fluorescence changes in continuo represent the elective techniques to follow FAD synthesis and degradation. Thus, after procedures able to calibrate flavin concentrations (Subheading 3.1), we describe simple continuous and rapid procedures, based on the peculiar optical properties of free flavins, useful to determine the rate of cofactor metabolism catalyzed by either recombinant enzymes or natural enzymes present in cellular lysates/subfractions (Subheading 3.2).Fluorescence properties of free flavins can also be useful in analytical determinations of the three molecular flavin forms, based on HPLC separation, with a quite high sensitivity. Assaying at different incubation times the molecular composition of the reaction mixture is a discontinuous experimental approach to measure the rate of FAD synthesis/degradation catalyzed by cell lysates or recombinant FAD synthase (Subheading 3.3). Continuous and discontinuous approaches can, when necessary, be performed in parallel.
Assuntos
Ácidos Graxos Dessaturases/metabolismo , Riboflavina/análise , Riboflavina/química , Animais , Cromatografia Líquida de Alta Pressão , Clonagem Molecular , Ácidos Graxos Dessaturases/genética , Ácidos Graxos Dessaturases/isolamento & purificação , Mononucleotídeo de Flavina/análise , Mononucleotídeo de Flavina/química , Flavina-Adenina Dinucleotídeo/análise , Flavina-Adenina Dinucleotídeo/química , Fluorescência , Homeostase , Humanos , Proteínas Recombinantes/metabolismoRESUMO
Fatty acid desaturase catalyzes the desaturation reactions by insertion of double bonds into the fatty acyl chain, producing unsaturated fatty acids. Though soluble fatty acid desaturases have been studied widely in advanced organisms, there are very limited studies of membrane fatty acid desaturases due to the difficulty of generating recombinant desaturase. Brassica napus is a rapeseed, which possesses a range of different membrane-bound desaturases capable of producing fatty acids including Δ3, Δ4, Δ8, Δ9, Δ12, and Δ15 fatty acids. The 1155 bp open reading frame of Δ12 fatty acid desaturase (FAD12) from Brassica napus codes for 383 amino acid residues with a molecular weight of 44 kDa. It was expressed in Escherichia coli at 37 °C in soluble and insoluble forms when induced with 0.5 mM IPTG. Soluble FAD12 has been purified using Ni2+-Sepharose affinity chromatography with a total protein yield of 0.728 mg/mL. Gas chromatography-mass spectrometry (GC-MS) analysis revealed that desaturase activity of FAD12 could produce linoleic acid from oleic acid at a retention time of 17.6 with a conversion rate of 47%. Characterization of purified FAD12 revealed the optimal temperature of FAD12 was 50 °C with 2 mM preferred substrate concentration of oleic acid. Analysis of circular dichroism (CD) showed FAD12 was made up of 47.3% and 0.9% of alpha-helix and ß-sheet secondary structures. The predicted Tm value was 50.2 °C.
Assuntos
Brassica napus/enzimologia , Proteínas de Escherichia coli/química , Escherichia coli/enzimologia , Ácidos Graxos Dessaturases/química , Proteínas de Membrana/química , Proteínas de Plantas/química , Sequência de Aminoácidos , Brassica napus/genética , Cromatografia de Afinidade , Dicroísmo Circular , Escherichia coli/genética , Proteínas de Escherichia coli/genética , Proteínas de Escherichia coli/isolamento & purificação , Proteínas de Escherichia coli/metabolismo , Ácidos Graxos Dessaturases/genética , Ácidos Graxos Dessaturases/isolamento & purificação , Ácidos Graxos Dessaturases/metabolismo , Cromatografia Gasosa-Espectrometria de Massas , Genes Bacterianos , Genes de Plantas , Temperatura Alta , Ácido Linoleico/metabolismo , Proteínas de Membrana/genética , Proteínas de Membrana/isolamento & purificação , Proteínas de Membrana/metabolismo , Peso Molecular , Ácido Oleico/metabolismo , Fases de Leitura Aberta , Proteínas de Plantas/genética , Proteínas de Plantas/isolamento & purificação , Proteínas de Plantas/metabolismo , Estrutura Secundária de Proteína , SolubilidadeRESUMO
Fatty acid desaturases are enzymes that introduce double bonds into fatty acyl chains, among which stearoyl-acyl carrier protein desaturase (S-ACP-DES) was widely distributed in the plant kingdom. We cloned the cDNA coding for fab2/ssi2, an S-ACP-DES from Arabidopsis thaliana, into the vector pET30a and heterologously expressed this fatty acid desaturase in Escherichia coli BL21 (DE3). After being induced with IPTG, the fusion protein was efficiently expressed in a soluble form. The SSI2 desaturase was purified by nickel ion affinity chromatography and the product obtained showed a single band by SDS-PAGE analysis. The expression of ssi2 modified the fatty acid composition of the recombinant strain. The ratio of palmitic acid (16:0) decreased from 45.2% (the control strain) to 35.2% while palmitoleate (16:1Delta9) and cis-vaccenate (18:1Delta11) levels were enhanced to some extent. The desaturase enzymatic activity was measured in vivo when the enzyme substrate stearic acid was provided in the culture medium. A new fatty acid, oleic acid (18:1Delta9) was found in the recombinant strain which did not exist in wild-type E. coli. These results demonstrated that the cofactors of the host system can complement the requirement of the SSI2 desaturase.
Assuntos
Proteínas de Arabidopsis/metabolismo , Escherichia coli/metabolismo , Ácidos Graxos Dessaturases/metabolismo , Arabidopsis/enzimologia , Proteínas de Arabidopsis/genética , Proteínas de Arabidopsis/isolamento & purificação , Escherichia coli/genética , Ácidos Graxos Dessaturases/genética , Ácidos Graxos Dessaturases/isolamento & purificação , Ácidos Graxos/química , Ácidos Graxos/metabolismo , Proteínas Recombinantes de Fusão/genética , Proteínas Recombinantes de Fusão/isolamento & purificação , Proteínas Recombinantes de Fusão/metabolismoRESUMO
Arbuscular mycorrhizal (AM) fungi are oleaginous organisms, and the most abundant fatty acyl moiety usually found in their lipids is palmitvaccenic acid (16:1Δ11cis ). However, it is not known how this uncommon fatty acid species is made. Here, we have cloned two homologues of lepidopteran fatty acyl-coenzyme A Δ11 desaturases from the AM fungus Rhizophagus irregularis. Both enzymes, DES1 and DES2, are expressed in intraradical mycelium and can complement the unsaturated fatty acid-requiring auxotrophic growth phenotype of the Saccharomyces cerevisiae ole1Δ mutant. DES1 expression leads almost exclusively to oleic acid (18:1Δ9cis ) production, whereas DES2 expression results in the production of 16:1Δ11cis and vaccenic acid (18:1Δ11cis ). DES2 therefore encodes a Δ11 desaturase that is likely to be responsible for the synthesis of 16:1Δ11cis in R. irregularis.
Assuntos
Ácidos Graxos Dessaturases/metabolismo , Fungos/enzimologia , Fungos/metabolismo , Micorrizas/enzimologia , Micorrizas/metabolismo , Ácidos Graxos Dessaturases/química , Ácidos Graxos Dessaturases/genética , Ácidos Graxos Dessaturases/isolamento & purificação , Regulação Fúngica da Expressão Gênica , Saccharomyces cerevisiae/enzimologia , Saccharomyces cerevisiae/genética , Saccharomyces cerevisiae/crescimento & desenvolvimento , Saccharomyces cerevisiae/metabolismoRESUMO
The psychrotrophic Antarctic alga, Chlorella vulgaris NJ-7, grows under an extreme environment of low temperature and high salinity. In an effort to better understand the correlation between fatty acid metabolism and acclimation to Antarctic environment, we analyzed its fatty acid compositions. An extremely high amount of Delta(12) unsaturated fatty acids was identified which prompted us to speculate about the involvement of Delta(12) fatty acid desaturase in the process of acclimation. A full-length cDNA sequence, designated CvFAD2, was isolated from C. vulgaris NJ-7 via reverse transcription polymerase chain reaction (RT-PCR) and RACE methods. Sequence alignment and phylogenetic analysis showed that the gene was homologous to known microsomal Delta(12)-FADs with the conserved histidine motifs. Heterologous expression in yeast was used to confirm the regioselectivity and the function of CvFAD2. Linoleic acid (18:2), normally not present in wild-type yeast cells, was detected in transformants of CvFAD2. The induction of CvFAD2 at an mRNA level under cold stress and high salinity is detected by real-time PCR. The results showed that both temperature and salinity motivated the upregulation of CvFAD2 expression. The accumulation of CvFAD2 increased 2.2-fold at 15 degrees C and 3.9-fold at 4 degrees C compared to the alga at 25 degrees C. Meanwhile a 1.7- and 8.5-fold increase at 3 and 6% NaCl was detected. These data suggest that CvFAD2 is the enzyme responsible for the Delta(12) fatty acids desaturation involved in the adaption to cold and high salinity for Antarctic C. vugaris NJ-7.
Assuntos
Adaptação Fisiológica/genética , Proteínas de Algas/genética , Chlorella vulgaris/genética , Ácidos Graxos Dessaturases/genética , Proteínas de Algas/isolamento & purificação , Sequência de Aminoácidos , Regiões Antárticas , Chlorella vulgaris/enzimologia , Clonagem Molecular , Temperatura Baixa , Sequência Conservada , DNA Complementar/genética , Ácidos Graxos Dessaturases/isolamento & purificação , Dados de Sequência Molecular , Filogenia , RNA Mensageiro/biossíntese , RNA Mensageiro/genética , Proteínas Recombinantes de Fusão/biossíntese , Saccharomyces cerevisiae , Salinidade , Alinhamento de Sequência , Homologia de Sequência de Aminoácidos , Estresse Fisiológico/genéticaRESUMO
Changes in gene expression play a critical role in enhancing the ability of cyanobacteria to survive under cold conditions. In the present study, Spirulina platensis cultures were grown at the optimal growth temperature, in the light, before being transferred to dark conditions at 22 degrees C. Two dimensional-differential gel electrophoresis was then performed to separate differentially expressed proteins that were subsequently identified by MS. Among all differentiated proteins identified, a protein involved in fatty acid biosynthesis, (3R)-hydroxymyristoyl-[acyl-carrier-protein]-dehydratase encoded by fabZ, was the most up-regulated protein. However, the fatty-acid desaturation proteins were not significantly differentiated. This raised the question of how the unsaturated fatty acid, especially gamma-linolenic acid, content in the cells in the cold-dark shift remained stable compared with that of the cold shift. Thus, a study at the transcriptional level of these desaturase genes, desC, desA and desD, and also of the fabZ gene was conducted. The results indicated that in the dark, where energy is limited, mRNA stability was enhanced by exposure to low temperatures. The data demonstrate that when the cells encounter cold stress with energy limitation, they can maintain their homeoviscous adaptation ability via mRNA stability.
Assuntos
Ácidos Graxos Dessaturases/genética , Ácidos Graxos/metabolismo , Regulação Bacteriana da Expressão Gênica , Proteômica , Spirulina/enzimologia , Spirulina/fisiologia , Proteínas de Bactérias/química , Proteínas de Bactérias/genética , Proteínas de Bactérias/isolamento & purificação , Proteínas de Bactérias/metabolismo , Temperatura Baixa , Eletroforese em Gel Bidimensional , Ácidos Graxos Dessaturases/química , Ácidos Graxos Dessaturases/isolamento & purificação , Ácidos Graxos Dessaturases/metabolismo , Hidroliases/genética , Hidroliases/metabolismo , Luz , Estabilidade de RNA , RNA Bacteriano/genética , RNA Bacteriano/metabolismo , RNA Mensageiro/genética , RNA Mensageiro/metabolismo , Espectrometria de Massas por Ionização e Dessorção a Laser Assistida por Matriz , Spirulina/genética , Transcrição GênicaRESUMO
In plants, the endoplasmic reticulum (ER)-associated oleate desaturase (FAD2) is the key enzyme responsible for the production of linoleic acid in non-photosynthetic tissues. In this study, we report the characterization of a seed-specific isoform of microsomal omega-6 fatty acid desaturase gene (FAD2-1B) sharing high sequence similarity with FAD2-1 from soybean. Several potential promoter elements including seed-specific motifs are found in the 5'-flanking region of FAD2-1B gene. The ORF of FAD2-1B is 1161 bp long and encodes a protein of 387 amino acids. This deduced protein holds three histidine boxes and four putative membrane-spanning helices, and possesses a signal for endoplasmic reticulum retention at C-terminal. Yeast cells transformed with the plasmid construct containing soybean FAD2-1B accumulate an appreciable amount of linoleic acid (18:2), normally not present in wild-type yeast cells, indicating that the cloned gene encodes a functional FAD2 enzyme. Both semi-quantitative RT-PCR and in silico analysis show that FAD2-1B gene is specifically expressed in developing seeds of soybean.
Assuntos
Ácidos Graxos Dessaturases/genética , Ácidos Graxos Ômega-6/metabolismo , Glycine max/genética , Microssomos/enzimologia , Sementes/genética , Sequência de Aminoácidos , Sequência de Bases , Ácidos Graxos Dessaturases/química , Ácidos Graxos Dessaturases/isolamento & purificação , Isoenzimas/química , Isoenzimas/genética , Isoenzimas/isolamento & purificação , Dados de Sequência Molecular , Sementes/enzimologia , Análise de Sequência de DNA , Análise de Sequência de Proteína , Glycine max/enzimologiaRESUMO
Mitochondrial very-long-chain acyl-coenzyme A dehydrogenase (VLCAD) was purified from human liver. The molecular masses of the native enzyme and the subunit were estimated to be 154 and 70 kD, respectively. The enzyme was found to catalyze the major part of mitochondrial palmitoylcoenzyme A dehydrogenation in liver, heart, skeletal muscle, and skin fibroblasts (89-97, 86-99, 96-99, and 78-87%, respectively). Skin fibroblasts from 26 patients suspected of having a disorder of mitochondrial beta-oxidation were analyzed for VLCAD protein using immunoblotting, and 7 of them contained undetectable or trace levels of the enzyme. The seven deficient fibroblast lines were characterized by measuring acyl-coenzyme A dehydrogenation activities, overall palmitic acid oxidation, and VLCAD protein synthesis using pulse-chase, further confirming the diagnosis of VLCAD deficiency. These results suggested the heterogenous nature of the mutations causing the deficiency in the seven patients. Clinically, all patients with VLCAD deficiency exhibited cardiac disease. At least four of them presented with hypertrophic cardiomyopathy. This frequency (> 57%) was much higher than that observed in patients with other disorders of mitochondrial long-chain fatty acid oxidation that may be accompanied by cardiac disease in infants.
Assuntos
Ácidos Graxos Dessaturases/isolamento & purificação , Erros Inatos do Metabolismo Lipídico/enzimologia , Mitocôndrias Hepáticas/enzimologia , Acil Coenzima A/metabolismo , Acil-CoA Desidrogenase de Cadeia Longa , Western Blotting , Ácidos Graxos Dessaturases/metabolismo , Feminino , Fibroblastos , Humanos , Masculino , Mitocôndrias Cardíacas/enzimologia , Peso Molecular , Palmitatos/metabolismoRESUMO
BACKGROUND: Fatty acid desaturases are enzymes that introduce double bonds into fatty acyl chains. Extensive studies of fatty acid desaturases have been done in many plants. However, less is known about the diversity of this gene family in peanut (Arachis hypogaea L.), an important oilseed crop that is cultivated worldwide. RESULTS: In this study, twelve novel AhFADs genes were identified and isolated from peanut. Quantitative real-time PCR analysis indicated that the transcript abundances of AhFAB2-2 and AhFAD3-1 were higher in seeds than in other tissues examined, whereas the AhADS and AhFAD7-1 transcripts were more abundant in leaves. AhFAB2-3, AhFAD3-2, AhFAD4, AhSLD-4, and AhDES genes were highly expressed in flowers, whereas AhFAD7-2, AhSLD-2, and AhSLD-3 were expressed most strongly in stems. During seed development, the expressions of AhFAB2-2, AhFAD3-1, AhFAD7-1, and AhSLD-3 gradually increased in abundance, reached a maximum expression level, and then decreased. The AhFAB2-3, AhFAD3-2, AhFAD4, AhADS, and AhDES transcript levels remained relatively high at the initial stage of seed development, but decreased thereafter. The AhSLD-4 transcript level remained relatively low at the initial stage of seed development, but showed a dramatic increase in abundance at the final stage. The AhFAD7-2 and AhSLD-2 transcript levels remained relatively high at the initial stage of seed development, but then decreased, and finally increased again. The AhFAD transcripts were differentially expressed following exposure to abiotic stresses or abscisic acid. Moreover, the functions of one AhFAD6 and four AhSLD genes were confirmed by heterologous expression in Synechococcus elongates or Saccharomyces cerevisiae. CONCLUSIONS: The present study provides valuable information that improves understanding of the biological roles of FAD genes in fatty acid synthesis, and will help peanut breeders improve the quality of peanut oil via molecular design breeding.
Assuntos
Arachis/enzimologia , Ácidos Graxos Dessaturases/genética , Ácidos Graxos Dessaturases/isolamento & purificação , Clonagem Molecular , Ácidos Graxos Dessaturases/química , Flores/enzimologia , Regulação da Expressão Gênica de Plantas/genética , Família Multigênica/genética , Filogenia , Folhas de Planta/enzimologia , Sementes/enzimologia , Homologia de Sequência de AminoácidosRESUMO
The biosynthesis of arachidonic acid (20:4(Delta5Z,8Z,11Z,14Z)) from linoleic acid in plants by transgenic means requires the sequential and specific action of two desaturation reactions and one elongation reaction. Here, we describe the isolation of a specific acyl-lipid-desaturase catalyzing the formation of the double bond at position 5 from a cDNA library from Phytophthora megasperma. The isolated full-length cDNA harbors a sequence of 1740 bp encoding a protein of 477 amino acids with a calculated molecular weight of 53.5 kDa. The desaturase sequence contained a predicted N-terminal cytochrome b(5)-like domain, as well as three histidine-rich domains. For functional identification, the cDNA was expressed in Saccharomyces cerevisiae, and the formation of newly formed fatty acids was analyzed. The expression of the heterologous enzyme resulted in the formation of arachidonic acid after di-homo-gamma-linolenic acid supplementation and in the formation of eicosapentaenoic acid synthesis from omega3-arachidonic acid. Results presented here on the substrate specificity identify this expressed protein as a classical Delta5-acyl-lipid-desaturase, capable of specifically introducing a double bond at the Delta5 position solely in 20-carbon-atom chain length fatty acids containing a double bond at position Delta8. Detailed analysis of the different lipid species showed a preferential occurrence of the desaturation reaction for fatty acids esterified to phosphatidylcholine.
Assuntos
Ácido Araquidônico/biossíntese , Ácido Eicosapentaenoico/biossíntese , Ácidos Graxos Dessaturases/genética , Ácidos Graxos Dessaturases/metabolismo , Phytophthora/enzimologia , Ácido Araquidônico/análise , Clonagem Molecular , DNA Complementar/genética , Dessaturase de Ácido Graxo Delta-5 , Ácido Eicosapentaenoico/análise , Ácidos Graxos Dessaturases/isolamento & purificação , Ácidos Graxos Insaturados/análise , Ácidos Graxos Insaturados/biossíntese , Phytophthora/genética , Phytophthora/metabolismo , Saccharomyces cerevisiae/enzimologia , Saccharomyces cerevisiae/fisiologia , Especificidade por SubstratoRESUMO
A survey of the three kinetoplastid genome projects revealed the presence of three putative front-end desaturase genes in Leishmania major, one in Trypanosoma brucei and two highly identical ones (98%) in T. cruzi. The encoded gene products were tentatively annotated as Delta8, Delta5 and Delta6 desaturases for L. major, and Delta6 desaturase for both trypanosomes. After phylogenetic and structural analysis of the deduced proteins, we predicted that the putative Delta6 desaturases could have Delta4 desaturase activity, based mainly on the conserved HX(3)HH motif for the second histidine box, when compared with Delta4 desaturases from Thraustochytrium, Euglena gracilis and the microalga, Pavlova lutheri, which are more than 30% identical to the trypanosomatid enzymes. After cloning and expression in Saccharomyces cerevisiae, it was possible to functionally characterize each of the front-end desaturases present in L. major and T. brucei. Our prediction about the presence of Delta4 desaturase activity in the three kinetoplastids was corroborated. In the same way, Delta5 desaturase activity was confirmed to be present in L. major. Interestingly, the putative Delta8 desaturase turned out to be a functional Delta6 desaturase, being 35% and 31% identical to Rhizopus oryzae and Pythium irregulareDelta6 desaturases, respectively. Our results indicate that no conclusive predictions can be made about the function of this class of enzymes merely on the basis of sequence homology. Moreover, they indicate that a complete pathway for very-long-chain polyunsaturated fatty acid biosynthesis is functional in L. major using Delta6, Delta5 and Delta4 desaturases. In trypanosomes, only Delta4 desaturases are present. The putative algal origin of the pathway in kinetoplastids is discussed.
Assuntos
Ácidos Graxos Insaturados/biossíntese , Trypanosoma/enzimologia , Sequência de Aminoácidos , Animais , Sequência de Bases , Cromatografia Gasosa , Cromatografia em Gel , Primers do DNA , Evolução Molecular , Ácidos Graxos Dessaturases/química , Ácidos Graxos Dessaturases/genética , Ácidos Graxos Dessaturases/isolamento & purificação , Ácidos Graxos Dessaturases/metabolismo , Ácidos Graxos Insaturados/análise , Genes de Protozoários , Dados de Sequência Molecular , Homologia de Sequência de Aminoácidos , Trypanosoma/genéticaRESUMO
Rainbow trout, Oncorhynchus mykiss, are intensively cultured globally. Understanding their requirement for long-chain polyunsaturated fatty acids (LC-PUFA) and the biochemistry of the enzymes and biosynthetic pathways required for fatty acid synthesis is important and highly relevant in current aquaculture. Most gnathostome vertebrates have two fatty acid desaturase (fads) genes with known functions in LC-PUFA biosynthesis and termed fads1 and fads2. However, teleost fish have exclusively fads2 genes. In rainbow trout, a fads2 cDNA had been previously cloned and found to encode an enzyme with Δ6 desaturase activity. In the present study, a second fads2 cDNA was cloned from the liver of rainbow trout and termed fads2b. The full-length mRNA contained 1578 nucleotides with an open reading frame of 1365 nucleotides that encoded a 454 amino acid protein with a predicted molecular weight of 52.48 kDa. The predicted Fads2b protein had the characteristic traits of the microsomal Fads family, including an N-terminal cytochrome b5 domain containing the heme-binding motif (HPPG), histidine boxes (HDXGH, HFQHH and QIEHH) and three transmembrane regions. The fads2b was expressed predominantly in the brain, liver, intestine and pyloric caeca. Expression of the fasd2b in yeast generated a protein that was found to specifically convert eicosatetraenoic acid (20:4n-3) to eicosapentaenoic acid (20:5n-3), and therefore functioned as a Δ5 desaturase. Therefore, rainbow trout have two fads2 genes that encode proteins with Δ5 and Δ6 desaturase activities, respectively, which enable this species to perform all the desaturation steps required for the biosynthesis of LC-PUFA from C18 precursors.
Assuntos
Ácidos Graxos Dessaturases/genética , Ácidos Graxos Dessaturases/isolamento & purificação , Oncorhynchus mykiss/metabolismo , Sequência de Aminoácidos , Animais , Sequência de Bases , Clonagem Molecular , DNA Complementar/genética , Ácidos Graxos Dessaturases/química , Ácidos Graxos Dessaturases/metabolismo , Perfilação da Expressão Gênica , Dados de Sequência Molecular , Filogenia , Reação em Cadeia da Polimerase em Tempo Real , Saccharomyces cerevisiae/metabolismo , Alinhamento de Sequência , Análise de Sequência de RNARESUMO
Oil palm (Elaeis guineensis Jacq.) is one of the highest oil-yield crops in the world. A Δ12-desaturases associated with the primary steps of long-chain polyunsaturated fatty acid (LC-PUFA) biosynthesis were successfully cloned from oil palm and their functions identified. The open reading frames (ORFs) of egFAD2 (GenBank accession: KT023602) consisted of 1176bp and code for 391 amino acids. Their deduced polypeptides showed 75-93% identity to microsomal Δ12-desaturases from other higher plants, and each contained the three histidine clusters typical of the catalytic domains of such enzymes. RT-PCR experiment indicated that the egFAD2 gene exhibited the highest accumulation in the mesocarp of fruits at 120-140 DAP (i.e. the fourth period of fruit development) and, despite having different expression levels, the other four stages were at significantly lower levels compared with the fourth stage. Plasmid pYES2-egFAD2 was transformed into Saccharomyces cerevisiae strain INVSc1 using lithium acetate method for expression under the induction of galactose. Yeast cells transformed with plasmid constructs containing egFAD12 produced an appreciable amount of linoleic acids (18:2(Δ9,)(12)), not normally present in wild-type yeast cells, indicating that the genes encoded functional Δ12-desaturase enzymes.
Assuntos
Arecaceae/enzimologia , Ácidos Graxos Dessaturases/metabolismo , Ácido Linoleico/biossíntese , Óleos de Plantas/química , Saccharomyces cerevisiae/metabolismo , Sequência de Aminoácidos , Arecaceae/genética , Arecaceae/crescimento & desenvolvimento , Biologia Computacional , Ácidos Graxos Dessaturases/isolamento & purificação , Frutas/enzimologia , Frutas/genética , Frutas/crescimento & desenvolvimento , Regulação da Expressão Gênica no Desenvolvimento , Regulação da Expressão Gênica de Plantas , Microssomos/metabolismo , Óleo de Palmeira , Filogenia , Reação em Cadeia da Polimerase em Tempo Real , Alinhamento de Sequência , Transformação GenéticaRESUMO
The commercially available gel, 2-pyridyl disulphide hydroxypropyl ether-Sepharose (thiopropyl-Sepharose 6B), can be used to remove bound ligand completely from butyryl-CoA dehydrogenase (EC 1.399.2) in two simple operations. The resultant enzyme forms normal complexes with acetoacetyl-CoA and CoA persulphide, contains no bound CoA as determined by the enzymatic assay for CoA, and retains full catalytic activity.
Assuntos
Coenzima A/isolamento & purificação , Ácidos Graxos Dessaturases/isolamento & purificação , Animais , Butiril-CoA Desidrogenase , Bactérias Anaeróbias Gram-Negativas/enzimologia , Ligantes , Ligação Proteica , Sefarose/análogos & derivadosRESUMO
A particulate fraction obtained from Alcaligenes faecalis could desaturate palmitic acid to palmitoleic acid. NADPH, ATP, CoA, Fe2+ and Mg2+ were essential cofactors for the reaction. The desaturation showed an absolute requirement for O2. Metal ions like Mn2+, Mo6+ and Cu2+ did not affect the desaturation, while Zn2+ was inhibitory. Sulfhydryl agents such as cysteine, glutathione and beta-mercaptoethanol had no effect, but SH-blocking agents like HgCl2 and p-hydroxymercuribenzoate inhibited the reaction. Azide and cyanide strongly inhibited the reaction while CO had no effect. The presence of a b-type cytochrome in the enzyme preparation was confirmed by the spectral studies on the reaction of enzyme with NADPH. Involvement of b-type cytochrome in the desaturation reaction was demonstrated by the reoxidation of b-type cytochrome initially reduced with NADPH, by the addition of palmitic acid and other cofactors. The pH optimum for the enzyme activity was 7.4. The optimum temperature for enzyme activity was 25 degrees C and maximum activity was obtained at the end of 45 min.
Assuntos
Alcaligenes/enzimologia , Ácidos Graxos Dessaturases/isolamento & purificação , Ácidos Palmíticos/metabolismo , Trifosfato de Adenosina/metabolismo , Cromatografia em Camada Fina , Coenzima A/metabolismo , Citocromos/metabolismo , Concentração de Íons de Hidrogênio , Ferro/metabolismo , Magnésio/metabolismo , NADP/metabolismoRESUMO
A procedure using high hydrostatic pressure without detergent has been applied in this study to subfractionate the components of the delta 6-desaturase system from the rat liver endoplasmic reticulum. Microsomes were suspended in a buffer containing liposomes made of phosphatidylcholine. The mixture was placed in a sealed pressure bomb and subjected to hydrostatic pressure of up to 1500 bars. Under these conditions the total desaturase activity was found in the liposomal fraction thus indicating that the three components of the desaturase system, namely NADH-cytochrome b5 reductase, cytochrome b5 and the delta 6-desaturase co-extracted. Size chromatography and FPLC of the released proteins followed by SDS-PAGE confirmed the independent release of the three components corresponding to the delta 6-desaturase, system. delta 6-Desaturase activity could be fully regenerated by mixing the aqueous dispersions of the three components without further purification. Our results indicate that these components are physically facing a similar lipid environment in the microsomal membrane.