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1.
Neuroimage ; 217: 116886, 2020 08 15.
Artigo em Inglês | MEDLINE | ID: mdl-32389728

RESUMO

INTRODUCTION: Geometric distortions along the phase encoding direction caused by off-resonant spins are a major issue in EPI based functional and diffusion imaging. The widely used blip up/down approach estimates the underlying distortion field from a pair of images with inverted phase encoding direction. Typically, iterative methods are used to find a solution to the ill-posed problem of finding the displacement field that maps up/down acquisitions onto each other. Here, we explore the use of a deep convolutional network to estimate the displacement map from a pair of input images. METHODS: We trained a deep convolutional U-net architecture that was previously used to estimate optic flow between moving images to learn to predict the distortion map from an input pair of distorted EPI acquisitions. During the training step, the network minimizes a loss function (similarity metric) that is calculated from corrected input image pairs. This approach does not require the explicit knowledge of the ground truth distortion map, which is difficult to get for real life data. RESULTS: We used data from a total of Ntrain â€‹= â€‹22 healthy subjects to train our network. A separate dataset of Ntest â€‹= â€‹12 patients including some with abnormal findings and unseen acquisition modes, e.g. LR-encoding, coronal orientation) was reserved for testing and evaluation purposes. We compared our results to FSL's topup function with default parameters that served as the gold standard. We found that our approach results in a correction accuracy that is virtually identical to the optimum found by an iterative search, but with reduced computational time. CONCLUSION: By using a deep convolutional network, we can reduce the processing time to a few seconds per volume, which is significantly faster than iterative approaches like FSL's topup which takes around 10min on the same machine (but using only 1 CPU). This facilitates the use of a blip up/down scheme for all diffusion-weighted acquisitions and potential real-time EPI distortion correction without sacrificing accuracy.


Assuntos
Imagem de Difusão por Ressonância Magnética/métodos , Imagem Ecoplanar/métodos , Processamento de Imagem Assistida por Computador/métodos , Adulto , Algoritmos , Artefatos , Mapeamento Encefálico , Simulação por Computador , Bases de Dados Factuais , Imagem de Difusão por Ressonância Magnética/estatística & dados numéricos , Imagem Ecoplanar/estatística & dados numéricos , Humanos , Aprendizado de Máquina , Redes Neurais de Computação
2.
MAGMA ; 30(6): 591-607, 2017 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-28695398

RESUMO

OBJECTIVE: A new technique for 2D gradient-recalled echo echo-planar imaging (GE-EPI) termed 'variable slice thickness' (VAST) is proposed, which reduces signal losses caused by through-slice susceptibility artifacts, while keeping the volume repetition time (TR) manageable. The slice thickness is varied across the brain, with thinner slices being used in the inferior brain regions where signal voids are most severe. MATERIALS AND METHODS: Various axial slice thickness schemes with identical whole-brain coverage were compared to regular EPI, which may either suffer from unfeasibly long TR if appropriately thin slices are used throughout, or signal loss if no counter-measures are taken. Evaluation is based on time-course signal-to-noise (tSNR) maps from resting state data and a statistical group-level region of interest (ROI) analysis on breath-hold fMRI measurements. RESULTS: The inferior brain region signal voids with static B0 inhomogeneities could be markedly reduced with VAST GE-EPI in contrast to regular GE-EPI. ROI-averaged event-related signal changes showed 48% increase in VAST compared to GE-EPI with regular "thick" slices. tSNR measurements proved the comparable signal robustness of VAST in comparison to regular GE-EPI with thin slices. CONCLUSION: A novel acquisition strategy for functional 2D GE-EPI at ultrahigh magnetic field is presented to reduce susceptibility-induced signal voids and keep TR sufficiently short for whole-brain coverage.


Assuntos
Encéfalo/diagnóstico por imagem , Imagem Ecoplanar/métodos , Artefatos , Encéfalo/anatomia & histologia , Encéfalo/fisiologia , Mapeamento Encefálico/métodos , Mapeamento Encefálico/estatística & dados numéricos , Suspensão da Respiração , Imagem Ecoplanar/estatística & dados numéricos , Humanos , Processamento de Imagem Assistida por Computador/métodos , Processamento de Sinais Assistido por Computador , Razão Sinal-Ruído , Fatores de Tempo
3.
MAGMA ; 30(6): 545-554, 2017 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-28608327

RESUMO

OBJECTIVES: The objectives were to investigate the diffusional kurtosis imaging (DKI) incorporation into the intravoxel incoherent motion (IVIM) model for measurements of cerebral hypoperfusion in healthy subjects. MATERIALS AND METHODS: Eight healthy subjects underwent a hyperventilation challenge with a 4-min diffusion weighted imaging protocol, using 8 b values chosen with the Cramer-Rao Lower Bound optimization approach. Four regions of interest in gray matter (GM) were analyzed with the DKI-IVIM model and the bi-exponential IVIM model, for normoventilation and hyperventilation conditions. RESULTS: A significant reduction in the perfusion fraction (f) and in the product fD* of the perfusion fraction with the pseudodiffusion coefficient (D*) was found with the DKI-IVIM model, during the hyperventilation challenge. In the cerebellum GM, the percentage changes were f: -43.7 ± 40.1, p = 0.011 and fD*: -50.6 ± 32.1, p = 0.011; in thalamus GM, f: -47.7 ± 34.7, p = 0.012 and fD*: -47.2 ± 48.7, p = 0.040. In comparison, using the bi-exponential IVIM model, only a significant decrease in the parameter fD* was observed for the same regions of interest. In frontal-GM and posterior-GM, the reduction in f and fD* did not reach statistical significance, either with DKI-IVIM or the bi-exponential IVIM model. CONCLUSION: When compared to the bi-exponential IVIM model, the DKI-IVIM model displays a higher sensitivity to detect changes in perfusion induced by the hyperventilation condition.


Assuntos
Encéfalo/irrigação sanguínea , Encéfalo/diagnóstico por imagem , Imagem de Difusão por Ressonância Magnética/métodos , Hiperventilação/diagnóstico por imagem , Adulto , Volume Sanguíneo Cerebral , Circulação Cerebrovascular , Imagem de Difusão por Ressonância Magnética/estatística & dados numéricos , Imagem Ecoplanar/métodos , Imagem Ecoplanar/estatística & dados numéricos , Feminino , Voluntários Saudáveis , Humanos , Processamento de Imagem Assistida por Computador/métodos , Angiografia por Ressonância Magnética/métodos , Masculino , Movimento (Física) , Imagem de Perfusão/métodos , Imagem de Perfusão/estatística & dados numéricos
4.
Eur Radiol ; 26(3): 656-63, 2016 Mar.
Artigo em Inglês | MEDLINE | ID: mdl-26060066

RESUMO

OBJECTIVES: To clarify the usefulness of 3.0-T MR elastography (MRE) in diagnosing the histological grades of liver fibrosis using preliminary clinical data. MATERIALS AND METHODS: Between November 2012 and March 2014, MRE was applied to all patients who underwent liver MR study at a 3.0-T clinical unit. Among them, those who had pathological evaluation of liver tissue within 3 months from MR examinations were retrospectively recruited, and the liver stiffness measured by MRE was correlated with histological results. Institutional review board approved this study, waiving informed consent. RESULTS: There were 70 patients who met the inclusion criteria. Liver stiffness showed significant correlation with the pathological grades of liver fibrosis (rho = 0.89, p < 0.0001, Spearman's rank correlation). Areas under the receiver operating characteristic curve were 0.93, 0.95, 0.99 and 0.95 for fibrosis score greater than or equal to F1, F2, F3 and F4, with cut-off values of 3.13, 3.85, 4.28 and 5.38 kPa, respectively. Multivariate analysis suggested that grades of necroinflammation also affected liver stiffness, but to a significantly lesser degree as compared to fibrosis. CONCLUSIONS: 3.0-T clinical MRE was suggested to be sufficiently useful in assessing the grades of liver fibrosis. KEY POINTS: MR elastography may help clinicians assess patients with chronic liver diseases. Usefulness of 3.0-T MR elastography has rarely been reported. Measured liver stiffness correlated well with the histological grades of liver fibrosis. Measured liver stiffness was also affected by necroinflammation, but to a lesser degree. 3.0-T MRE could be a non-invasive alternative to liver biopsy.


Assuntos
Imagem Ecoplanar/métodos , Técnicas de Imagem por Elasticidade/métodos , Cirrose Hepática/diagnóstico , Adulto , Idoso , Idoso de 80 Anos ou mais , Área Sob a Curva , Biópsia por Agulha/métodos , Imagem Ecoplanar/estatística & dados numéricos , Elasticidade , Técnicas de Imagem por Elasticidade/estatística & dados numéricos , Feminino , Hepatite B Crônica/diagnóstico , Hepatite B Crônica/patologia , Hepatite C Crônica/diagnóstico , Hepatite C Crônica/patologia , Humanos , Fígado/patologia , Cirrose Hepática/classificação , Cirrose Hepática/patologia , Masculino , Pessoa de Meia-Idade , Necrose , Curva ROC , Estudos Retrospectivos , Sensibilidade e Especificidade
5.
Neuroimage ; 112: 43-51, 2015 May 15.
Artigo em Inglês | MEDLINE | ID: mdl-25743045

RESUMO

The recent introduction of simultaneous multi-slice (SMS) acquisitions has enabled the acquisition of blood oxygen level dependent (BOLD) functional magnetic resonance imaging (fMRI) data with significantly higher temporal sampling rates. In a parallel development, the use of multi-echo fMRI acquisitions in conjunction with a multi-echo independent component analysis (ME-ICA) approach has been introduced as a means to automatically distinguish functionally-related BOLD signal components from signal artifacts, with significant gains in sensitivity, statistical power, and specificity. In this work, we examine the gains that can be achieved with a combined approach in which data obtained with a multi-echo simultaneous multi-slice (MESMS) acquisition are analyzed with ME-ICA. We find that ME-ICA identifies significantly more BOLD-like components in the MESMS data as compared to data acquired with a conventional multi-echo single-slice acquisition. We demonstrate that the improved performance of MESMS derives from both an increase in the number of temporal samples and the enhanced ability to filter out high-frequency artifacts.


Assuntos
Imagem Ecoplanar/métodos , Imagem Ecoplanar/estatística & dados numéricos , Processamento de Imagem Assistida por Computador/métodos , Processamento de Imagem Assistida por Computador/estatística & dados numéricos , Imageamento por Ressonância Magnética/métodos , Imageamento por Ressonância Magnética/estatística & dados numéricos , Oxigênio/sangue , Adulto , Artefatos , Feminino , Humanos , Masculino , Análise de Componente Principal
6.
Neuroimage ; 73: 135-43, 2013 Jun.
Artigo em Inglês | MEDLINE | ID: mdl-23403182

RESUMO

EPI with Keyhole (EPIK) is a hybrid imaging technique used to improve the performance of EPI in dynamic MRI applications. The method had been previously validated at 1.5 T with both phantom and in vivo images; EPIK was able to provide a higher temporal resolution and less image distortions than single-shot EPI. The data presented here demonstrate that the performance of EPIK can be further improved by accelerating it with the parallel imaging. For this work, this combination was tested at 3 T. After initial evaluation using phantom images, use of the method in functional MRI was verified with visual fMRI measurements as well as MRI simulation results. The results showed that accelerated EPIK had increased temporal resolution with favorable robustness against susceptibility artifacts when compared with EPI or non-accelerated EPIK.


Assuntos
Imagem Ecoplanar/métodos , Processamento de Imagem Assistida por Computador/métodos , Imageamento por Ressonância Magnética/métodos , Encéfalo/anatomia & histologia , Encéfalo/fisiologia , Simulação por Computador , Imagem Ecoplanar/estatística & dados numéricos , Habituação Psicofisiológica , Humanos , Imageamento por Ressonância Magnética/estatística & dados numéricos , Modelos Estatísticos , Imagens de Fantasmas , Análise de Regressão , Razão Sinal-Ruído
7.
Hum Brain Mapp ; 34(11): 3086-100, 2013 Nov.
Artigo em Inglês | MEDLINE | ID: mdl-22736546

RESUMO

Field inhomogeneities caused by variations in magnetic susceptibility throughout the head lead to geometric distortions, mainly in the phase-encode direction of echo-planar images (EPI). The magnitude and spatial characteristics of the distortions depend on the orientation of the head in the magnetic field and will therefore vary with head movement. A new method is presented, based on a phase informed model for motion and susceptibility (PIMMS), which estimates the change in geometric distortion associated with head motion. This method fits a model of the head motion parameters and scanner hardware characteristics to EPI phase time series. The resulting maps of the model fit parameters are used to correct for susceptibility artifacts in the magnitude images. Results are shown for EPI-based fMRI time-series acquired at 3T, demonstrating that compared with conventional rigid body realignment, PIMMS removes residual variance associated with motion-related distortion effects. Furthermore, PIMMS can lead to a reduction in false negatives compared with the widely accepted approach which uses standard rigid body realignment and includes the head motion parameters in the statistical model. The PIMMS method can be used with any standard EPI sequence for which accurate phase information is available.


Assuntos
Imagem Ecoplanar/métodos , Movimentos da Cabeça , Processamento de Imagem Assistida por Computador/métodos , Algoritmos , Artefatos , Mapeamento Encefálico/métodos , Interpretação Estatística de Dados , Imagem Ecoplanar/estatística & dados numéricos , Reações Falso-Negativas , Humanos , Imageamento por Ressonância Magnética/métodos , Modelos Estatísticos , Movimento (Física) , Oxigênio/sangue , Reprodutibilidade dos Testes
8.
Neuroimage ; 59(3): 2307-15, 2012 Feb 01.
Artigo em Inglês | MEDLINE | ID: mdl-21979381

RESUMO

T2*-weighted imaging of the spinal cord suffers from signal dropouts that hamper blood-oxygenation-level-dependent functional magnetic resonance imaging (fMRI). They are due to field inhomogeneities caused by the different magnetic susceptibilities of the vertebrae and the intervertebral disks that vary periodically along the cord and, thus, cannot be compensated appropriately with conventional (constant) shimming. In this study, a single, slice-specific gradient pulse ("z-shim") is applied in echo-planar imaging of axial sections in order to compensate for the corresponding through-slice signal dephasing without affecting the acquisition time, i.e. the temporal resolution. Based on a reference acquisition sampling a range of compensation moments, the value yielding the maximum signal amplitude within the spinal cord is determined for each slice. Severe N/2 ghosting for larger compensation moments is avoided by applying the gradient pulse after the corresponding reference echoes. Furthermore, first-order flow compensation in the slice direction of both the slice-selection and the z-shim gradient pulse considerably reduces signal fluctuations in the cerebro-spinal fluid surrounding the spinal cord, i.e. would minimize ringing artifacts in fMRI. Phantom and in vivo experiments show the necessity to use slice-specific compensation moments in the presence of local susceptibility differences. Measurements performed in a group of 24 healthy volunteers at 3T demonstrate that this approach improves T2*-weighted imaging of axial sections of the cervical spinal cord by (i) increasing the signal intensity (overall by about 20%) and (ii) reducing signal intensity variations along the cord (by about 80%). Thus, it may help to improve the feasibility and reliability of fMRI of the spinal cord.


Assuntos
Imageamento por Ressonância Magnética/métodos , Medula Espinal/anatomia & histologia , Algoritmos , Imagem Ecoplanar/métodos , Imagem Ecoplanar/estatística & dados numéricos , Humanos , Processamento de Imagem Assistida por Computador/métodos , Oxigênio/sangue , Imagens de Fantasmas , Imagem Corporal Total
9.
Neuroimage ; 56(3): 1035-42, 2011 Jun 01.
Artigo em Inglês | MEDLINE | ID: mdl-21396456

RESUMO

This study examined the large-scale connectivity among multiple resting-state networks (RSNs) in the human brain. Independent component analysis was first applied to the resting-state functional MRI (fMRI) data acquired from 12 healthy young subjects for the separation of RSNs. Four sensory (lateral and medial visual, auditory, and sensory-motor) RSNs and four cognitive (default-mode, self-referential, dorsal and ventral attention) RSNs were identified. Gaussian Bayesian network (BN) learning approach was then used for the examination of the conditional dependencies among these RSNs and the construction of the network-to-network directional connectivity patterns. The BN based results demonstrated that sensory networks and cognitive networks were hierarchically organized. Specially, we found the sensory networks were highly intra-dependent and the cognitive networks were strongly intra-influenced. In addition, the results depicted dominant bottom-up connectivity from sensory networks to cognitive networks in which the self-referential and the default-mode networks might play respectively important roles in the process of resting-state information transfer and integration. The present study characterized the global connectivity relations among RSNs and delineated more characteristics of spontaneous activity dynamics.


Assuntos
Encéfalo/fisiologia , Rede Nervosa/fisiologia , Vias Aferentes/fisiologia , Vias Auditivas/fisiologia , Teorema de Bayes , Encéfalo/anatomia & histologia , Cognição/fisiologia , Interpretação Estatística de Dados , Imagem Ecoplanar/estatística & dados numéricos , Vias Eferentes/fisiologia , Feminino , Humanos , Processamento de Imagem Assistida por Computador , Imageamento por Ressonância Magnética , Masculino , Modelos Neurológicos , Modelos Estatísticos , Vias Neurais/anatomia & histologia , Vias Neurais/fisiologia , Distribuição Normal , Análise de Regressão , Vias Visuais/fisiologia , Adulto Jovem
10.
Neuroimage ; 49(1): 217-24, 2010 Jan 01.
Artigo em Inglês | MEDLINE | ID: mdl-19732837

RESUMO

This technical note describes the construction of posterior probability maps (PPMs) for Bayesian model selection (BMS) at the group level. This technique allows neuroimagers to make inferences about regionally specific effects using imaging data from a group of subjects. These effects are characterised using Bayesian model comparisons that are analogous to the F-tests used in statistical parametric mapping, with the advantage that the models to be compared do not need to be nested. Additionally, an arbitrary number of models can be compared together. This note describes the integration of the Bayesian mapping approach with a random effects analysis model for BMS using group data. We illustrate the method using fMRI data from a group of subjects performing a target detection task.


Assuntos
Teorema de Bayes , Processamento de Imagem Assistida por Computador/estatística & dados numéricos , Modelos Estatísticos , Algoritmos , Encéfalo/anatomia & histologia , Imagem Ecoplanar/estatística & dados numéricos , Humanos , Imageamento por Ressonância Magnética/estatística & dados numéricos , Oxigênio/sangue , Teoria da Probabilidade , Reprodutibilidade dos Testes
11.
Med Phys ; 37(10): 5165-78, 2010 Oct.
Artigo em Inglês | MEDLINE | ID: mdl-21089750

RESUMO

PURPOSE: Identification of calcifications and hemorrhages is essential for the etiological diagnosis of cerebral lesions. The purpose of this work was to develop a robust method for characterization of para- and diamagnetic intracerebral lesions based on clinical gradient-echo magnetic resonance phase data acquired at 1.5 Tesla. METHODS: The magnetic susceptibility distribution of biological tissue produces a distinct magnetic field pattern, which is directly reflected in gradient-echo magnetic resonance phase images. Compared to brain parenchyma, iron-laden tissues are more paramagnetic, whereas mineralized tissues usually possess more diamagnetic susceptibilities. Magnetic resonance phase data were inverted to the underlying susceptibility distribution utilizing additional geometrical information about the lesions, which was obtained from the gradient-echo magnitude signal void corresponding to the lesions. Clinical magnetic resonance exams of three patients with multiple brain lesions (total n = 70) were processed and evaluated. For one patient, the results were validated by an additionally available computed tomography scan. Numerical simulations were conducted to evaluate the robustness of the method. RESULTS: The obtained susceptibility maps showed impressive delineation of lesions, vessels, and potentially iron-laden tissue. Compensation of the nonlocal field perturbations was clearly discernable on the susceptibility maps. In all cases, discrimination of para- from diamagnetic lesions was achieved and the results were confirmed by the additional computed tomography. The numerical simulations demonstrated that robust determination of the total magnetic moment of lesions is possible. Thus, the proposed method is able to yield quantitative values for the minimum magnetic susceptibility of lesions. CONCLUSIONS: A method has been developed for noninvasive, semiautomatic characterization of brain lesions based on magnetic resonance imaging data. Initial clinical results demonstrated that the proposed technique can be applied to diagnosis of lesions with calcifications or hemorrhages. If confirmed by larger studies, it bears the potential to obviate the need for confirmation with computed tomography.


Assuntos
Encefalopatias/diagnóstico , Encefalopatias/patologia , Encéfalo/patologia , Imageamento por Ressonância Magnética/estatística & dados numéricos , Algoritmos , Fenômenos Biofísicos , Encéfalo/diagnóstico por imagem , Encefalopatias/diagnóstico por imagem , Calcinose/diagnóstico , Calcinose/patologia , Imagem Ecoplanar/estatística & dados numéricos , Humanos , Hemorragias Intracranianas/diagnóstico , Hemorragias Intracranianas/patologia , Tomografia Computadorizada por Raios X
12.
Epilepsia ; 50(12): 2605-10, 2009 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-19490046

RESUMO

PURPOSE: Tuberous sclerosis complex produces a wide range of intracranial pathologies, the most common being cortical tubers and subependymal nodules. This study evaluates which magnetic resonance (MR) sequences show the pathology best and to see if "ultrafast" sequences can show the pathology robustly. METHODS: MR imaging was performed on 29 adults with tuberous sclerosis complex. Anatomically matched 5-mm-thick sections were taken in the axial plane using four different sequences, including single shot fast spin echo as the ultrafast method. The ability of those sequences to show cortical tubers and subependymal nodules was assessed by reporting each sequence independently and comparing with the reference standard report based on all of the sequences together. RESULTS: A total of 219 cortical tubers were shown in the 29 people; three did not have cortical tubers. Cortical tubers were best delineated on fluid-attenuated inversion recovery (FLAIR) images (false-negative rate <0.5%) followed by the T(2)-weighted images (false-negative rate 21%). The single-shot fast spin echo and gradient echo T(2)* sequences both failed to show more than 50% of cortical tubers. Subependymal nodules were shown in 24 of 29 people and the gradient echo T(2)* sequence showed that pathology best in all 24 cases. DISCUSSION: Our study shows that single-shot fast spin echo sequences do not sufficiently show the expected intracranial complications of tuberous sclerosis complex and should not be considered as an alternative to standard sequences in this group. Cortical tubers are shown exceptionally well on FLAIR images, whereas subependymal nodules (and calcified tubers) are best shown on gradient echo T(2)* images.


Assuntos
Encéfalo/patologia , Imageamento por Ressonância Magnética/estatística & dados numéricos , Esclerose Tuberosa/patologia , Adolescente , Adulto , Distribuição por Idade , Fatores Etários , Calcinose/diagnóstico , Calcinose/patologia , Córtex Cerebral/patologia , Imagem Ecoplanar/métodos , Imagem Ecoplanar/estatística & dados numéricos , Reações Falso-Negativas , Feminino , Humanos , Aumento da Imagem , Imageamento por Ressonância Magnética/métodos , Masculino , Pessoa de Meia-Idade , Padrões de Referência , Esclerose Tuberosa/diagnóstico
13.
Epilepsia ; 50(12): 2526-37, 2009 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-19490031

RESUMO

PURPOSE: The aim of this study was to introduce a new approach for analysis of functional magnetic resonance imaging (fMRI) data in order to illustrate the temporal development of the blood oxygenation level-dependent (BOLD) signal changes induced by epileptic seizures. METHOD: In order to sequentially analyze the fMRI images acquired during epileptic seizures, a continuous series of echo planar imaging (EPI) scans covering the complete period of a seizure was acquired. Data were segmented into 10-s blocks. Each block, representing a unique experimental condition, was contrasted with a neutral (no seizure) baseline condition. Visual comparison of the activations from one block to the next highlighted the course of activations and deactivations during the seizure event. This analysis was applied to three independent seizures of one patient with peri-rolandic epilepsy secondary to chronic encephalitis: one seizure before epilepsy surgery and two after unsuccessful tailored resection. Observations were compared to results from invasive subdural electroencephalography (EEG) monitoring, single-photon emission computed tomography (SPECT) coregistered to MRI (SISCOM), and independent component analysis (ICA), a model-free method of BOLD-signal analysis. RESULTS: The initial increase in BOLD signal occurred 10-40 s before clinical onset in the same location compared to the seizure-onset zone determined by invasive subdural evaluation and SISCOM. Sequential involvement of cortical and subcortical structures was in agreement with SISCOM, intracranial EEG recordings, and ICA results. DISCUSSION: In selected patients, sequential analysis of changes in BOLD signal induced by epileptic seizures might represent a useful approach for investigating the temporal development of brain activity during epileptic seizures, thereby allowing imaging of those cerebral structures involved in seizure generation and propagation.


Assuntos
Córtex Cerebral/fisiopatologia , Epilepsia/diagnóstico , Epilepsia/fisiopatologia , Imageamento por Ressonância Magnética/estatística & dados numéricos , Mapeamento Encefálico/métodos , Imagem Ecoplanar/estatística & dados numéricos , Eletrodos Implantados , Eletroencefalografia/estatística & dados numéricos , Epilepsia/cirurgia , Epilepsia Rolândica/diagnóstico , Epilepsia Rolândica/fisiopatologia , Epilepsia Rolândica/cirurgia , Feminino , Seguimentos , Humanos , Aumento da Imagem , Interpretação de Imagem Assistida por Computador , Imageamento por Ressonância Magnética/métodos , Masculino , Oxigênio/sangue , Espaço Subdural , Tomografia Computadorizada de Emissão de Fóton Único , Resultado do Tratamento
14.
BMC Med Imaging ; 9: 2, 2009 Jan 21.
Artigo em Inglês | MEDLINE | ID: mdl-19159437

RESUMO

BACKGROUND: Knowledge about age-specific normal values for left ventricular mass (LVM), end-diastolic volume (EDV), end-systolic volume (ESV), stroke volume (SV) and ejection fraction (EF) by cardiac magnetic resonance imaging (CMR) is of importance to differentiate between health and disease and to assess the severity of disease. The aims of the study were to determine age and gender specific normal reference values and to explore the normal physiological variation of these parameters from adolescence to late adulthood, in a cross sectional study. METHODS: Gradient echo CMR was performed at 1.5 T in 96 healthy volunteers (11-81 years, 50 male). Gender-specific analysis of parameters was undertaken in both absolute values and adjusted for body surface area (BSA). RESULTS: Age and gender specific normal ranges for LV volumes, mass and function are presented from the second through the eighth decade of life. LVM, ESV and EDV rose during adolescence and declined in adulthood. SV and EF decreased with age. Compared to adult females, adult males had higher BSA-adjusted values of EDV (p = 0.006) and ESV (p < 0.001), similar SV (p = 0.51) and lower EF (p = 0.014). No gender differences were seen in the youngest, 11-15 year, age range. CONCLUSION: LV volumes, mass and function vary over a broad age range in healthy individuals. LV volumes and mass both rise in adolescence and decline with age. EF showed a rapid decline in adolescence compared to changes throughout adulthood. These findings demonstrate the need for age and gender specific normal ranges for clinical use.


Assuntos
Imagem Ecoplanar/estatística & dados numéricos , Ventrículos do Coração/anatomia & histologia , Volume Sistólico/fisiologia , Função Ventricular Esquerda/fisiologia , Adolescente , Adulto , Distribuição por Idade , Idoso , Idoso de 80 Anos ou mais , Criança , Estudos Transversais , Feminino , Humanos , Masculino , Pessoa de Meia-Idade , Tamanho do Órgão/fisiologia , Valores de Referência , Reprodutibilidade dos Testes , Sensibilidade e Especificidade , Distribuição por Sexo , Suécia/epidemiologia , Adulto Jovem
15.
PLoS One ; 14(3): e0213994, 2019.
Artigo em Inglês | MEDLINE | ID: mdl-30908510

RESUMO

Purpose of this work was to assess feasibility of cardiac diffusion tensor imaging (cDTI) at 7 T in a set of healthy, unfixed, porcine hearts using various parallel imaging acceleration factors and to compare SNR and derived cDTI metrics to a reference measured at 3 T. Magnetic resonance imaging was performed on 7T and 3T whole body systems using a spin echo diffusion encoding sequence with echo planar imaging readout. Five reference (b = 0 s/mm2) images and 30 diffusion directions (b = 700 s/mm2) were acquired at both 7 T and 3 T using a GRAPPA acceleration factor R = 1. Scans at 7 T were repeated using R = 2, R = 3, and R = 4. SNR evaluation was based on 30 reference (b = 0 s/mm2) images of 30 slices of the left ventricle and cardiac DTI metrics were compared within AHA segmentation. The number of hearts scanned at 7 T and 3 T was n = 11. No statistically significant differences were found for evaluated helix angle, secondary eigenvector angle, fractional anisotropy and apparent diffusion coefficient at the different field strengths, given sufficiently high SNR and geometrically undistorted images. R≥3 was needed to reduce susceptibility induced geometric distortions to an acceptable amount. On average SNR in myocardium of the left ventricle was increased from 29±3 to 44±6 in the reference image (b = 0 s/mm2) when switching from 3 T to 7 T. Our study demonstrates that high resolution, ex vivo cDTI is feasible at 7 T using commercial hardware.


Assuntos
Imagem de Tensor de Difusão/métodos , Coração/anatomia & histologia , Sus scrofa/anatomia & histologia , Animais , Imagem de Tensor de Difusão/estatística & dados numéricos , Imagem Ecoplanar/métodos , Imagem Ecoplanar/estatística & dados numéricos , Estudos de Viabilidade , Coração/diagnóstico por imagem , Imageamento Tridimensional/métodos , Imageamento Tridimensional/estatística & dados numéricos , Técnicas In Vitro , Masculino , Modelos Animais , Modelos Cardiovasculares , Razão Sinal-Ruído
16.
PLoS One ; 14(11): e0223440, 2019.
Artigo em Inglês | MEDLINE | ID: mdl-31738777

RESUMO

With continuing advances in MRI techniques and the emergence of higher static field strengths, submillimetre spatial resolution is now possible in human functional imaging experiments. This has opened up the way for more specific types of analysis, for example investigation of the cortical layers of the brain. With this increased specificity, it is important to correct for the geometrical distortions that are inherent to echo planar imaging (EPI). Inconveniently, higher field strength also increases these distortions. The resulting displacements can easily amount to several millimetres and as such pose a serious problem for laminar analysis. We here present a method, Recursive Boundary Registration (RBR), that corrects distortions between an anatomical and an EPI volume. By recursively applying Boundary Based Registration (BBR) on progressively smaller subregions of the brain we generate an accurate whole-brain registration, based on the grey-white matter contrast. Explicit care is taken that the deformation does not break the topology of the cortical surface, which is an important requirement for several of the most common subsequent steps in laminar analysis. We show that RBR obtains submillimetre accuracy with respect to a manually distorted gold standard, and apply it to a set of human in vivo scans to show a clear increase in spacial specificity. RBR further automates the process of non-linear distortion correction. This is an important step towards routine human laminar fMRI for large field of view acquisitions. We provide the code for the RBR algorithm, as well as a variety of functions to better investigate registration performance in a public GitHub repository, https://github.com/TimVanMourik/OpenFmriAnalysis, under the GPL 3.0 license.


Assuntos
Córtex Cerebral/diagnóstico por imagem , Imageamento por Ressonância Magnética/métodos , Algoritmos , Córtex Cerebral/anatomia & histologia , Imagem Ecoplanar/métodos , Imagem Ecoplanar/estatística & dados numéricos , Neuroimagem Funcional/métodos , Neuroimagem Funcional/estatística & dados numéricos , Substância Cinzenta/anatomia & histologia , Substância Cinzenta/diagnóstico por imagem , Humanos , Interpretação de Imagem Assistida por Computador/métodos , Interpretação de Imagem Assistida por Computador/estatística & dados numéricos , Imageamento por Ressonância Magnética/estatística & dados numéricos , Oxigênio/sangue , Substância Branca/anatomia & histologia , Substância Branca/diagnóstico por imagem
17.
J Affect Disord ; 110(1-2): 106-14, 2008 Sep.
Artigo em Inglês | MEDLINE | ID: mdl-18291534

RESUMO

OBJECTIVES: Previous imaging reports showed over-activation of fronto-limbic structures in bipolar patients, particularly in response to emotional stimuli. In this study, for the first time, we used perfusion weighted imaging (PWI) to analyze lobar cerebral blood volume (CBV) in bipolar disorder to further explore the vascular component to its pathophysiology. METHODS: Fourteen patients with DSM-IV bipolar disorder (mean age+/-SD=49.00+/-12.30 years; 6 males, 8 females) and 29 normal controls (mean age+/-SD=45.07+/-10.30 years; 13 males, 16 females) were studied. PWI images were obtained following intravenous injection of paramagnetic contrast agent (Gadolinium-DTPA), with a 1.5 T Siemens magnet using an echo-planar sequence. The contrast of enhancement (CE), was calculated pixel by pixel as the ratio of the maximum signal intensity drop during the passage of contrast agent (Sm) by the baseline pre-bolus signal intensity (So) (CE=Sm/So*100) for frontal, temporal, parietal, and occipital lobes, bilaterally, on two axial images. Higher CE values correspond to lower CBV and viceversa. RESULTS: Bipolar patients had significantly lower CE values in left frontal and temporal lobes (p=0.01 and p=0.03, respectively) and significantly inverse laterality index for frontal lobe (p=0.017) compared to normal controls. No significant correlations between CE measure and age or clinical variables were found (p>0.05). CONCLUSION: This study found increased left frontal and temporal CBV in bipolar disorder. Fronto-temporal hyper-perfusion may sustain over-activation of these structures during emotion modulation, which have been observed in patients with bipolar illness.


Assuntos
Transtorno Bipolar/fisiopatologia , Imagem Ecoplanar/estatística & dados numéricos , Lobo Frontal/irrigação sanguínea , Lobo Temporal/irrigação sanguínea , Transtorno Bipolar/diagnóstico , Transtorno Bipolar/diagnóstico por imagem , Meios de Contraste/administração & dosagem , Grupos Controle , Imagem Ecoplanar/métodos , Feminino , Lobo Frontal/diagnóstico por imagem , Lateralidade Funcional/fisiologia , Gadolínio DTPA/administração & dosagem , Humanos , Aumento da Imagem , Processamento de Imagem Assistida por Computador , Masculino , Pessoa de Meia-Idade , Lobo Occipital/irrigação sanguínea , Lobo Occipital/diagnóstico por imagem , Lobo Parietal/irrigação sanguínea , Lobo Parietal/diagnóstico por imagem , Escalas de Graduação Psiquiátrica/estatística & dados numéricos , Cintilografia , Fluxo Sanguíneo Regional/fisiologia , Lobo Temporal/diagnóstico por imagem
18.
Arch Gen Psychiatry ; 63(11): 1225-36, 2006 Nov.
Artigo em Inglês | MEDLINE | ID: mdl-17088503

RESUMO

CONTEXT: The orbitofrontal cortex (OFC)-striatal circuit, which is important for motivational behavior, is assumed to be involved in the pathophysiology of obsessive-compulsive disorder (OCD) according to current neurobiological models of this disorder. However, the engagement of this neural loop in OCD has not been tested directly in a cognitive activation imaging paradigm so far. OBJECTIVE: To determine whether the OFC and the ventral striatum show abnormal neural activity in OCD during cognitive challenge. DESIGN: A reversal learning task was employed in 20 patients with OCD who were not receiving medication and 27 healthy controls during an event-related functional magnetic resonance imaging experiment using a scanning sequence sensitive to OFC signal. This design allowed investigation of the neural correlates of reward and punishment receipt as well as of "affective switching," ie, altering behavior on reversing reinforcement contingencies. RESULTS: Patients with OCD exhibited an impaired task end result reflected by a reduced number of correct responses relative to control subjects but showed adequate behavior on receipt of punishment and with regard to affective switching. On reward outcome, patients showed decreased responsiveness in right medial and lateral OFC as well as in the right caudate nucleus (border zone ventral striatum) when compared with controls. During affective switching, patients recruited the left posterior OFC, bilateral insular cortex, bilateral dorsolateral, and bilateral anterior prefrontal cortex to a lesser extent than control subjects. No areas were found for which patients exhibited increased activity relative to controls, and no differential activations were observed for punishment in a direct group comparison. CONCLUSIONS: These data show behavioral impairments accompanied by aberrant OFC-striatal and dorsal prefrontal activity in OCD on a reversal learning task that addresses this circuit's function. These findings not only confirm previous reports of dorsal prefrontal dysfunction in OCD but also provide evidence for the involvement of the OFC-striatal loop in the pathophysiology of OCD.


Assuntos
Gânglios da Base/fisiopatologia , Cognição/fisiologia , Lobo Frontal/fisiopatologia , Imageamento por Ressonância Magnética/estatística & dados numéricos , Transtorno Obsessivo-Compulsivo/fisiopatologia , Reversão de Aprendizagem/fisiologia , Adulto , Núcleo Caudado/fisiologia , Aprendizagem por Discriminação/fisiologia , Imagem Ecoplanar/estatística & dados numéricos , Feminino , Humanos , Masculino , Pessoa de Meia-Idade , Modelos Neurológicos , Oxigênio/sangue , Córtex Pré-Frontal/fisiopatologia , Desempenho Psicomotor/fisiologia , Punição , Reforço Psicológico , Recompensa , Análise e Desempenho de Tarefas
19.
AJNR Am J Neuroradiol ; 28(9): 1706-9, 2007 Oct.
Artigo em Inglês | MEDLINE | ID: mdl-17885233

RESUMO

BACKGROUND AND PURPOSE: Although the prevalence of pineal cysts in autopsy series has been reported as being between 25% and 40%, MR studies have documented their frequency to range between 1.5% and 10.8%. The purpose of this high-resolution brain MR imaging study at 1.9T was to determine the prevalence of pineal cysts in healthy adults. MATERIALS AND METHODS: Brain MR images of 100 healthy young volunteers were randomly selected from our International Consortium for Brain Mapping project data base. Cysts were detected as circular areas of isointensity relative to CSF on both 3D gradient-echo T1-weighted and 2D fast spin-echo T2-weighted images. The inner diameters of all visualized pineal cysts were measured, and a criterion of 2.0 mm of the largest inner cross-sectional diameter was used to categorize cysts as being either small cystic changes (<2.0-mm diameter) or pineal cysts (>2.0-mm diameter). RESULTS: Twenty-three percent (23/100) of the volunteers had pineal cysts with a mean largest inner cross-sectional diameter of 4.3 mm (range, 2-14 mm); 13% (13/100) demonstrated cystic changes involving the pineal gland with the largest inner cross-sectional diameter of less than 2.0 mm. There was a slight female predominance. Two subjects with long-term follow-up scans showed no symptoms or changes in the size of their pineal cysts. CONCLUSION: On high-resolution MR imaging, the prevalence of pineal cysts was 23% in our healthy group of adults, which is consistent with previous autopsy studies. Long-term follow-up studies of 2 cases demonstrated the stability of the cysts.


Assuntos
Encefalopatias/diagnóstico , Encefalopatias/epidemiologia , Cistos/diagnóstico , Cistos/epidemiologia , Imagem Ecoplanar/métodos , Imagem Ecoplanar/estatística & dados numéricos , Medição de Risco/métodos , Encéfalo/patologia , Feminino , Humanos , Aumento da Imagem/métodos , Interpretação de Imagem Assistida por Computador/métodos , Masculino , Glândula Pineal , Prevalência , Valores de Referência , Fatores de Risco , Texas/epidemiologia
20.
AJNR Am J Neuroradiol ; 27(8): 1755-9, 2006 Sep.
Artigo em Inglês | MEDLINE | ID: mdl-16971630

RESUMO

BACKGROUND: Previous reports have suggested that abnormally reduced water diffusivity and T2 prolongation involving cerebral gray matter in patients with early sporadic Creutzfeldt-Jakob disease (sCJD) involves all areas of neocortex with similar frequency, except for primary sensorimotor cortex (Rolandic cortex) and visual cortex. Rolandic cortex often appears to be spared even in the presence of extensive surrounding neocortical signal intensity abnormality in adjacent frontal and parietal gray matter. A quantitative apparent diffusion coefficient (ADC) analysis was designed to investigate whether this unusual pattern results from pathophysiologic sparing of Rolandic cortex or from reduced conspicuity of signal intensity abnormality on MR imaging echo-planar diffusion-weighted images (epiDWI) related to unknown underlying features of Rolandic cortex. METHODS: ADC maps were derived from epiDWI of 6 patients with sCJD and 8 control patients. Bilateral regions of interest were manually selected in precentral gyri, superior frontal gyri, postcentral gyri, supramarginal gyri, thalamus, putamen, and caudate nuclei. ADC and relative ADC (rADC) values were calculated for each region of interest. RESULTS: Patients with CJD had significantly lower ADC values than control patients in all areas (P < or = 0.05). The trend toward decreased ADC values in the deep nuclei correlates well with previously published reports. rADC were not significantly different between CJD and control groups in any area (P > 0.25 in all cases). CONCLUSION: Quantitative ADC measurements in patients with early sCJD demonstrate a similar degree of reduced water diffusivity in the primary somatosensory cortex as in other neocortical areas, despite the normal appearance of these areas on visual inspection of epiDWI.


Assuntos
Síndrome de Creutzfeldt-Jakob/diagnóstico , Imagem de Difusão por Ressonância Magnética/estatística & dados numéricos , Imagem Ecoplanar/estatística & dados numéricos , Processamento de Imagem Assistida por Computador/estatística & dados numéricos , Córtex Motor/fisiopatologia , Córtex Somatossensorial/fisiopatologia , Idoso , Idoso de 80 Anos ou mais , Encéfalo/patologia , Encéfalo/fisiopatologia , Mapeamento Encefálico , Síndrome de Creutzfeldt-Jakob/fisiopatologia , Dominância Cerebral/fisiologia , Feminino , Humanos , Masculino , Computação Matemática , Pessoa de Meia-Idade , Córtex Motor/patologia , Neocórtex/patologia , Neocórtex/fisiopatologia , Valores de Referência , Software , Córtex Somatossensorial/patologia
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