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1.
Int J Mol Sci ; 25(6)2024 Mar 09.
Artigo em Inglês | MEDLINE | ID: mdl-38542150

RESUMO

Kemerovo virus (KEMV) is a tick-borne orbivirus transmitted by ticks of the genus Ixodes. Previous animal experimentation studies with orbiviruses, in particular the interferon receptor double knock-out (IFNAR(-/-)) mouse model, did not indicate bias that is related to age or sex. We endeavoured to assess the effect of serial and alternated passages of KEMV in mammalian or Ixodes cells on virus replication and potential virulence in male or female IFNAR(-/-) mice, with important age differences: younger males (4-5 months old), older males (14-15 months old), and old females (14-15 months old). After 30 serial passages in mammalian or tick cells, or alternated passages in the two cell types, older female mice which were inoculated with the resulting virus strains were the first to show clinical signs and die. Younger males behaved differently from older males whether they were inoculated with the parental strain of KEMV or with any of the cell culture-passaged strains. The groups of male and female mice inoculated with the mammalian cell culture-adapted KEMV showed the lowest viraemia. While older female and younger male mice died by day 6 post-inoculation, surprisingly, the older males survived until the end of the experiment, which lasted 10 days. RNA extracted from blood and organs of the various mice was tested by probe-based KEMV real-time RT-PCR. Ct values of the RNA extracts were comparable between older females and younger males, while the values for older males were >5 Ct units higher for the various organs, indicating lower levels of replication. It is noteworthy that the hearts of the old males were the only organs that were negative for KEMV RNA. These results suggest, for the first time, an intriguing age- and sex-related bias for an orbivirus in this animal model. Changes in the amino acid sequence of the RNA-dependent RNA polymerase of Kemerovo virus, derived from the first serial passage in Ixodes cells (KEMV Ps.IRE1), were identified in the vicinity of the active polymerase site. This finding suggests that selection of a subpopulation of KEMV with better replication fitness in tick cells occurred.


Assuntos
Ixodes , Orbivirus , Animais , Feminino , Masculino , Camundongos , Sequência de Aminoácidos , Técnicas de Cultura de Células , Ixodes/genética , Mamíferos/genética , Orbivirus/genética , RNA Viral/genética
2.
Virus Genes ; 59(2): 223-233, 2023 Apr.
Artigo em Inglês | MEDLINE | ID: mdl-36441333

RESUMO

In July 2019, a novel viral strain (JH2019C603) was isolated from sentinel cattle in Jinghong City, in the subtropical region of Yunnan Province, China. The virus replicated and caused cytopathological effects in both Aedes albopictus (C6/36) and Baby Hamster Syrian Kidney (BHK-21) cells. Agarose gel electrophoresis analysis revealed a viral genome comprised of 10 segments of double-stranded RNA, with a 1-2-2-1-1-1-1-1 migration pattern. Complete genome sequences of the JH2019C603 virus were determined through full-length cDNA amplification. Phylogenetic analysis based on the amino acid (aa) sequences of RNA-dependent RNA Polymerase (Pol), Major subcore (T2) and Major core-surface (T13) showed that JH2019C603 clustered with Yonaguni orbivirus (YONOV) from Japan, with aa identities relative to YONOV of 97.7% (Pol), 99.0% (T2) and 98.5% (T13). However, phylogenetic analysis based on the aa sequences of the outer capsid protein one and two (OC1 and OC2) showed that JH2019C603 formed an independent branch in the phylogenetic tree, and its aa identity with YONOV was only 55.4% (OC1) and 80.8% (OC2), respectively. Compared with the prototype of YONOV, a notable sequence deletion was observed in the 3' non-coding region of NS1, with the NS1 of JH2019C603 encoded within segment 7 (Seg-7), in contrast to YONOV, which contains NS1 in Seg-6. These results indicate that JH2019C603 belongs to the YONOV lineage and might be a novel serotype or a highly variant strain of YONOV. These findings will facilitate the identification of new isolates and clarify their geographical distribution, epidemiology, genetic diversity and possible disease associations.


Assuntos
Orbivirus , Cricetinae , Bovinos , Animais , China , Filogenia , Sorogrupo , Sequência de Aminoácidos , Genoma Viral/genética , RNA Viral/genética
3.
Int J Mol Sci ; 24(7)2023 Apr 06.
Artigo em Inglês | MEDLINE | ID: mdl-37047816

RESUMO

Bioinformatic analyses have predicted that orbiviruses encode an additional, small non-structural protein (NS5) from a secondary open reading frame on genome segment 10. However, this protein has not previously been detected in infected mammalian or insect cells. NS5-specific antibodies were generated in mice and were used to identify NS5 synthesised in orbivirus-infected BSR cells or cells transfected with NS5 expression plasmids. Confocal microscopy shows that although NS5 accumulates in the nucleus, particularly in the nucleolus, which becomes disrupted, it also appears in the cell cytoplasm, co-localising with mitochondria. NS5 helps to prevent the degradation of ribosomal RNAs during infection and reduces host-cell protein synthesis However, it helps to extend cell viability by supporting viral protein synthesis and virus replication. Pulldown studies showed that NS5 binds to ssRNAs and supercoiled DNAs and demonstrates interactions with ZBP1, suggesting that it modulates host-cell responses.


Assuntos
Orbivirus , Animais , Camundongos , Núcleo Celular/metabolismo , DNA , Orbivirus/genética , Orbivirus/metabolismo , RNA Viral/genética , Proteínas de Ligação a RNA , Proteínas não Estruturais Virais/genética , Proteínas não Estruturais Virais/metabolismo
4.
Emerg Infect Dis ; 28(12): 2446-2454, 2022 12.
Artigo em Inglês | MEDLINE | ID: mdl-36417933

RESUMO

African horse sickness (AHS) is a highly infectious and often fatal disease caused by 9 serotypes of the orbivirus African horse sickness virus (AHSV). In March 2020, an AHS outbreak was reported in Thailand in which AHSV serotype 1 was identified as the causative agent. Trivalent live attenuated vaccines serotype 1, 3, and 4 were used in a targeted vaccination campaign within a 50-km radius surrounding the infected cases, which promptly controlled the spread of the disease. However, AHS-like symptoms in vaccinated horses required laboratory diagnostic methods to differentiate infected horses from vaccinated horses, especially for postvaccination surveillance. We describe a real-time reverse transcription PCR-based assay for rapid characterization of the affecting field strain. The development and validation of this assay should imbue confidence in differentiating AHS-vaccinated horses from nonvaccinated horses. This method should be applied to determining the epidemiology of AHSV in future outbreaks.


Assuntos
Vírus da Doença Equina Africana , Doença Equina Africana , Orbivirus , Animais , Cavalos , Vírus da Doença Equina Africana/genética , Sorogrupo , Reação em Cadeia da Polimerase em Tempo Real , Doença Equina Africana/diagnóstico , Doença Equina Africana/epidemiologia , Doença Equina Africana/prevenção & controle , Vacinas Atenuadas
5.
J Gen Virol ; 102(9)2021 09.
Artigo em Inglês | MEDLINE | ID: mdl-34554079

RESUMO

The genus Orbivirus includes a variety of pathogenic viruses that are transmitted by biting midges, mosquitoes and ticks. Some of the economically most relevant orbiviruses are endemic to Namibia, like the livestock-pathogenic Bluetongue and African horse sickness viruses. Here, we assessed the diversity of orbiviruses circulating in the Zambezi region of north-eastern Namibia. A total of 10 250 biting midges and 10 206 mosquitoes were collected and screened for orbivirus infections. We identified Palyam virus (PALV) in a pool of biting midges (Culicoides sp.) sampled in the Wuparo Conservancy and three strains of Corriparta virus (CORV) in Culex sp. mosquitoes sampled in Mudumu National Park and the Mashi Conservancy. This is, to our knowledge, the first detection of PALV and CORV in Namibia. Both viruses infect vertebrates but only PALV has been reported to cause disease. PALV can cause foetal malformations and abortions in ruminants. Furthermore, a novel orbivirus, related to Kammavanpettai virus from India and Umatilla virus from North America, was discovered in biting midges (Culicoides sp.) originating from Mudumu National Park and tentatively named Mudumu virus (MUMUV). Complete genomes of PALV, CORV and MUMUV were sequenced and genetically characterized. The Namibian CORV strain showed 24.3 % nucleotide divergence in its subcore shell gene to CORV strains from Australia, indicating that African CORV variants vary widely from their Australian relatives. CORV was isolated in cell culture and replicated to high titres in mosquito and duck cells. No growth was found in rodent and primate cells. The data presented here show that diverse orbiviruses are endemic to the Zambezi region. Further studies are needed to assess their effects on wildlife and livestock.


Assuntos
Ceratopogonidae/virologia , Culicidae/virologia , Orbivirus/isolamento & purificação , Animais , Linhagem Celular , Genoma Viral , Sequenciamento de Nucleotídeos em Larga Escala , Insetos Vetores/virologia , Mosquitos Vetores/virologia , Namíbia , Orbivirus/classificação , Orbivirus/genética , Orbivirus/fisiologia , Filogenia , Replicação Viral , Sequenciamento Completo do Genoma
6.
J Gen Virol ; 102(9)2021 09.
Artigo em Inglês | MEDLINE | ID: mdl-34494948

RESUMO

Orbiviruses are arboviruses with 10 double-stranded linear RNA segments, and some have been identified as pathogens of dramatic epizootics in both wild and domestic ruminants. Tibet orbivirus (TIBOV) is a new orbivirus isolated from hematophagous insects in recent decades, and, currently, most of the strains have been isolated from insects in PR China, except for two from Japan. In this study, we isolated a novel reassortment TIBOV strain, YN15-283-01, from Culicoides spp. To identify and understand more characteristics of YN15-283-01, electrophoresis profiles of the viral genome, electron microscopic observations, plaque assays, growth curves in various cell lines, and bioinformatic analysis were conducted. The results indicated that YN15-283-01 replicated efficiently in mosquito cells, rodent cells and several primate cells. Furthermore, the maximum likelihood phylogenetic trees and simplot analysis of the 10 segments indicated that YN15-283-01 is a natural reassortment isolate that had emerged mainly from XZ0906 and SX-2017a.


Assuntos
Ceratopogonidae/virologia , Orbivirus/isolamento & purificação , Orbivirus/fisiologia , Vírus Reordenados/isolamento & purificação , Vírus Reordenados/fisiologia , Animais , Linhagem Celular , China , Genoma Viral , Humanos , Orbivirus/classificação , Orbivirus/genética , Filogenia , RNA de Cadeia Dupla/genética , RNA Viral/genética , Vírus Reordenados/classificação , Vírus Reordenados/genética , Replicação Viral
7.
J Gen Virol ; 102(12)2021 12.
Artigo em Inglês | MEDLINE | ID: mdl-34870577

RESUMO

Middle Point orbivirus (MPOV) is an Australian arbovirus, belongs to the Yunnan orbivirus species found in China. First detected and reported from Beatrice Hill, Northern Territory (NT), MPOV has to date, only been exclusively reported from the NT, Australia. Whilst genetic characterization of MPOV has been previously described, only restricted to sequence information for segments 2 and 3 coding core protein VP2 and outer capsid protein VP3, respectively. This study presents for the first time nearly full-length genome sequences of MPOV, which represent 24 isolates collected over a span of more than 20 years from 1997 to 2018. Whilst the majority of isolates were sampled at Beatrice Hill, NT where MPOV is most frequently isolated, this report also describes the first two isolations of MPOV from Queensland (QLD), Australia. One of which is the first non-bovine isolate obtained from the mosquito vector Aedes vittiger. We further compared these MPOV sequences with known sequences of the Yunnan orbivirus and other known orbivirus sequences of mosquito origin found in Australia. The phylogenetic analyses indicate the Australian MPOV sequences are more closely related to each other than other known sequences of Yunnan orbivirus. Furthermore, MPOV sequences are closely related to sequences from the Indonesian isolate JKT-8650. The clustering of Australian sequences in the phylogenetic tree suggests the monophyletic lineage of MPOV circulating in Australia. Further, ongoing surveillance is required to assess the existence and prevalence of this or other yet undetected lineages of MPOV and other orbiviruses in Australia.


Assuntos
Genoma Viral/genética , Orbivirus/genética , Filogenia , Aedes/virologia , Animais , Austrália , Bovinos/virologia , Mosquitos Vetores/virologia , Orbivirus/classificação , Orbivirus/isolamento & purificação , Infecções por Reoviridae/transmissão , Infecções por Reoviridae/veterinária , Infecções por Reoviridae/virologia , Especificidade da Espécie , Proteínas Virais/genética
8.
Arch Virol ; 166(4): 1151-1156, 2021 Apr.
Artigo em Inglês | MEDLINE | ID: mdl-33547486

RESUMO

Tibet orbivirus (TIBOV) was initially isolated in Tibet in 2009 and subsequently in Guangdong, Hunan, and Yunnan, China. We document the first isolation of TIBOV outside of China: two TIBOV isolates from Culicoides collected in 2009 and 2010 in Kagoshima, Japan. Their complete genome sequences were also determined. Our results suggest that the two virus isolates are of novel serotypes, evident by variability within genome segment 2 encoding VP2. These new putative TIBOV serotypes will help with future virus surveillance and with the evaluation of its potential to cause disease in domestic ruminants.


Assuntos
Genoma Viral/genética , Orbivirus/genética , Orbivirus/isolamento & purificação , Animais , Ceratopogonidae/virologia , Genômica , Japão , Orbivirus/classificação , Filogenia , RNA Viral/genética , Homologia de Sequência , Sorogrupo , Proteínas Virais/genética
9.
J Virol ; 93(13)2019 07 01.
Artigo em Inglês | MEDLINE | ID: mdl-30971476

RESUMO

In 2011, ticks were collected from livestock following an outbreak of Crimean Congo hemorrhagic fever (CCHF) in Gujarat state, India. CCHF-negative Hyalomma anatolicum tick pools were passaged for virus isolation, and two virus isolates were obtained, designated Karyana virus (KARYV) and Kundal virus (KUNDV), respectively. Traditional reverse transcription-PCR (RT-PCR) identification of known viruses was unsuccessful, but a next-generation sequencing (NGS) approach identified KARYV and KUNDV as viruses in the Reoviridae family, Orbivirus and Coltivirus genera, respectively. Viral genomes were de novo assembled, yielding 10 complete segments of KARYV and 12 nearly complete segments of KUNDV. The VP1 gene of KARYV shared a most recent common ancestor with Wad Medani virus (WMV), strain Ar495, and based on nucleotide identity we demonstrate that it is a novel WMV strain. The VP1 segment of KUNDV shares a common ancestor with Colorado tick fever virus, Eyach virus, Tai Forest reovirus, and Tarumizu tick virus from the Coltivirus genus. Based on VP1, VP6, VP7, and VP12 nucleotide and amino acid identities, KUNDV is proposed to be a new species of Coltivirus Electron microscopy supported the classification of KARYV and KUNDV as reoviruses and identified replication morphology consistent with other orbi- and coltiviruses. The identification of novel tick-borne viruses carried by the CCHF vector is an important step in the characterization of their potential role in human and animal pathogenesis.IMPORTANCE Ticks and mosquitoes, as well Culicoides, can transmit viruses in the Reoviridae family. With the help of next-generation sequencing (NGS), previously unreported reoviruses such as equine encephalosis virus, Wad Medani virus (WMV), Kammavanpettai virus (KVPTV), and, with this report, KARYV and KUNDV have been discovered and characterized in India. The isolation of KUNDV and KARYV from Hyalomma anatolicum, which is a known vector for zoonotic pathogens, such as Crimean Congo hemorrhagic fever virus, Babesia, Theileria, and Anaplasma species, identifies arboviruses with the potential to transmit to humans. Characterization of KUNDV and KARYV isolated from Hyalomma ticks is critical for the development of specific serological and molecular assays that can be used to determine the association of these viruses with disease in humans and livestock.


Assuntos
Coltivirus/classificação , Coltivirus/isolamento & purificação , Vírus da Febre Hemorrágica da Crimeia-Congo/isolamento & purificação , Febre Hemorrágica da Crimeia/complicações , Orbivirus/classificação , Orbivirus/isolamento & purificação , Filogenia , Carrapatos/virologia , Animais , Chlorocebus aethiops , Coltivirus/genética , Culicidae/virologia , Genoma Viral , Vírus da Febre Hemorrágica da Crimeia-Congo/classificação , Vírus da Febre Hemorrágica da Crimeia-Congo/genética , Febre Hemorrágica da Crimeia/epidemiologia , Febre Hemorrágica da Crimeia/virologia , Sequenciamento de Nucleotídeos em Larga Escala , Humanos , Índia , Mosquitos Vetores/virologia , Orbivirus/genética , Reoviridae/classificação , Reoviridae/genética , Reoviridae/isolamento & purificação , Reoviridae/ultraestrutura , Células Vero , Ensaio de Placa Viral , Proteínas Virais/genética
10.
Arch Virol ; 165(12): 2903-2908, 2020 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-32894348

RESUMO

A novel orbivirus (genus Orbivirus, family Reoviridae), designated Yonaguni orbivirus (YONOV), was isolated from bovine blood collected on a subtropical island of Japan in 2015. The YONOV genome (20,054 nucleotides in total) has a coding arrangement similar to those of mosquito-borne orbiviruses. YONOV has a close genetic relationship to mosquito-borne orbiviruses, especially to Mobuck virus (MBV), which was isolated in North America. However, YONOV and MBV share less than 74% nucleotide sequence identity in the major subcore protein (T2) coding sequence, which satisfies the criterion for species demarcation. It is still uncertain whether YONOV should be assigned to a novel species in the genus Orbivirus.


Assuntos
Genoma Viral , Orbivirus/classificação , Orbivirus/isolamento & purificação , Filogenia , Infecções por Reoviridae/veterinária , Proteínas Virais/genética , Animais , Bovinos/virologia , Culicidae/virologia , Japão , Fases de Leitura Aberta , Infecções por Reoviridae/virologia , Análise de Sequência de DNA
11.
Virus Genes ; 56(4): 527-530, 2020 Aug.
Artigo em Inglês | MEDLINE | ID: mdl-32300929

RESUMO

The complete coding sequences of five divergent strains of Changuinola virus (CGLV), collected over a 16-year period in Panama, were determined, using viral metagenomics. Each strain had 10 RNA segments that encoded structural and non-structural proteins with amino acid identities ranging from 33 to 99% with sequences of other 15 members of the Changuinola virus (Reoviridae: Orbivirus) species group. Genetic analyses of the five Panamanian virus strains revealed probable reassortment among multiple segments of the viruses.


Assuntos
Genoma Viral/genética , Genômica , Orbivirus/genética , Proteínas Virais/genética , Animais , Orbivirus/isolamento & purificação , Panamá , Filogenia , RNA Viral/genética , RNA Viral/isolamento & purificação , Análise de Sequência de DNA
12.
J Gen Virol ; 100(2): 295-300, 2019 02.
Artigo em Inglês | MEDLINE | ID: mdl-30632960

RESUMO

The genomic organization and in vitro host range of a novel mosquito-associated orbivirus, designated Skunk River virus, is described. The virus was isolated from Aedes trivittatus collected in Iowa in the United States. Three recognized viruses were also recovered: Culex flavivirus (family Flaviviridae), Houston virus (family Mesoniviridae) and Umatilla virus (family Reoviridae). The genome of Skunk River virus contains 10 segments and its organization is characteristic of viruses in the genus Orbivirus (family Reoviridae). The coding region of each segment was fully sequenced, revealing that the greatest nucleotide identity was to the corresponding regions of Big Cypress orbivirus and Sathuvachari virus, two recently described mosquito-associated orbiviruses. The phylogenetic inference is in agreement with these findings. In vitro host range experiments revealed that Aedes, Anopheles and Culex cell lines, and select lepidopteran and rodent cell lines, are permissive to Skunk River virus replication. In conclusion, we provide evidence of a novel mosquito-associated orbivirus in Iowa.


Assuntos
Aedes/virologia , Genoma Viral , Especificidade de Hospedeiro , Orbivirus/classificação , Orbivirus/isolamento & purificação , Animais , Anopheles , Linhagem Celular , Culex , Ordem dos Genes , Iowa , Lepidópteros , Orbivirus/genética , Orbivirus/fisiologia , Filogenia , Roedores , Análise de Sequência de DNA , Homologia de Sequência
13.
Emerg Infect Dis ; 24(5): 898-901, 2018 05.
Artigo em Inglês | MEDLINE | ID: mdl-29664366

RESUMO

A virus isolated from a sick horse from India in 2008 was confirmed by next-generation sequencing analysis to be equine encephalosis virus (EEV). EEV in India is concerning because several species of Culicoides midge, which play a major role in EEV natural maintenance and transmission, are present in this country.


Assuntos
Doenças dos Cavalos/virologia , Orbivirus/isolamento & purificação , Infecções por Reoviridae/veterinária , Animais , Ceratopogonidae/virologia , Doenças dos Cavalos/epidemiologia , Cavalos , Índia/epidemiologia , Orbivirus/genética , Filogenia , Infecções por Reoviridae/epidemiologia , Infecções por Reoviridae/virologia
14.
Virus Genes ; 54(5): 729-732, 2018 Oct.
Artigo em Inglês | MEDLINE | ID: mdl-30069670

RESUMO

Two virus strains, tentatively designated as ON-6/P/05 and ON-7/E/05, were isolated from blood samples of healthy cattle in the Yaeyama Islands, located in the southwestern-most region of Japan, in 2005. Ultrastructural observations of infected baby hamster (BHK-21) cells revealed that the viruses had features consistent with those of orbivirus. As with other orbiviruses, the viral genome consists of 10 double-stranded RNA segments. The full genome sequence of ON-6/P/05 was determined and shared high nucleotide and amino acid identities (90.07-98.22% nucleotide identity; 96.16-99.72% amino acid identity) with that of Sathuvachari virus (SVIV), a member of the species Sathuvachari virus of the genus Orbivirus, originally isolated from starlings collected in southern India in 1963. The sequence of segment two of ON-7/E/05 was identical to that of ON-6/P/05. The isolation of SVIV from cattle also indicated that the virus has a wider host range than previously thought. The potential pathogenicity of SVIV in domestic animals should be considered in future disease surveillance within its distribution range.


Assuntos
Bovinos/virologia , Genoma Viral , Orbivirus/genética , Orbivirus/isolamento & purificação , Animais , Linhagem Celular , Cricetinae , Feminino , Japão , Tipagem Molecular , Orbivirus/classificação , Especificidade da Espécie
15.
Virol J ; 14(1): 105, 2017 06 08.
Artigo em Inglês | MEDLINE | ID: mdl-28595631

RESUMO

BACKGROUND: Culicoides-borne orbiviruses, such as bluetongue virus (BTV) and African horse sickness virus (AHSV), are important pathogens that cause animal epidemic diseases leading to significant loss of domestic animals. This study was conducted to identify Culicoides-borne arboviruses and to investigate the associated infections in local livestock in Yunnan, China. METHODS: Culicoides were collected overnight in Mangshi City using light traps during August 2013. A virus was isolated from the collected Culicoides and grown using baby hamster kidney (BHK-21), Vero, Madin-Darby bovine kidney (MDBK) and Aedes albopictus (C6/36) cells. Preliminary identification of the virus was performed by polyacrylamide gel (PAGE) analysis. A full-length cDNA copy of the genome was amplified and sequenced. Serological investigations were conducted in local cattle, buffalo and goat using plaque-reduction neutralization tests. RESULTS: We isolated a viral strain (DH13C120) that caused cytopathogenic effects in BHK-21, Vero, MDBK and C6/36 cells. Suckling mice inoculated intracerebrally with DH13C120 showed signs of fatal neurovirulence. PAGE analysis indicated a genome consisting of 10 segments of double-stranded RNA that demonstrated a 3-3-3-1 pattern, similar to the migrating bands of Tibet orbivirus (TIBOV). Phylogenetic analysis of the viral RNA-dependent RNA polymerase (Pol), sub-core-shell (T2, and outer core (T13) proteins revealed that DH13C120 clustered with TIBOV, and the amino acid sequences of DH13C120 virus shared more than 98% identity with TIBOV XZ0906. However, outer capsid protein VP2 and outer capsid protein VP5 shared only 43.1 and 79.3% identity, respectively, indicating that the DH13C120 virus belongs to TIBOV, and it may represent different serotypes with XZ0906. A serosurvey revealed the presence of neutralizing antibodies with 90% plaque-reduction neutralization against TIBOV DH13C120 in local cattle (44%), buffalo (20%), and goat (4%). Four-fold or higher levels of TIBOV-2-neutralizing antibody titers were detected between the convalescent and acute phases of infection in local livestock. CONCLUSIONS: A new strain of TIBOV was isolated from Culicoides. This study provides the first evidence of TIBOV infection in livestock in Yunnan, China, and suggests that TIBOV could be a potential pathogen in livestock.


Assuntos
Ceratopogonidae/virologia , Orbivirus/isolamento & purificação , Infecções por Reoviridae/veterinária , Aedes , Animais , Búfalos , Bovinos , Linhagem Celular , DNA Complementar/isolamento & purificação , Eletroforese em Gel de Poliacrilamida , Cabras , Gado , Camundongos , Reação em Cadeia da Polimerase , Infecções por Reoviridae/epidemiologia , Análise de Sequência de DNA , Estudos Soroepidemiológicos , Tibet , Cultura de Vírus , Sequenciamento Completo do Genoma
16.
Arch Virol ; 162(11): 3529-3534, 2017 Nov.
Artigo em Inglês | MEDLINE | ID: mdl-28785815

RESUMO

Three new viruses classifiable within the Totivirus and Orbivirus genera were detected from Anopheles mosquito species collected in Eastern Australia. The viruses could not be isolated in C6/36 mosquito cell cultures but were shown to replicate in their mosquito hosts by small RNA analysis. The viruses grouped phylogenetically with other viruses recently detected in insects. These discoveries contribute to a better understanding of commensal viruses in Australian mosquitoes and the evolution of these viruses.


Assuntos
Anopheles/virologia , Orbivirus/isolamento & purificação , Totivirus/isolamento & purificação , Distribuição Animal , Animais , Austrália , Linhagem Celular , Orbivirus/genética , Filogenia , Totivirus/genética
17.
Bioorg Med Chem ; 25(14): 3597-3605, 2017 07 15.
Artigo em Inglês | MEDLINE | ID: mdl-28396019

RESUMO

Nowadays modified oligonucleotides are widely used in diagnostics and as novel therapeutics. Introduction of modified or unnatural residues into oligonucleotides allows fine tuning of their binding properties to complementary nucleic acids and leads to improved stability both in vitro and in vivo. Previously it was demonstrated that insertion of phenoxazine nucleotides with various groups in C9-position into oligonucleotides leads to a significant increase of duplex stability with complementary DNA and RNA. Here the synthesis of a novel G-clamp nucleoside analogue (G8AE-clamp) bearing 2-aminoethyl tether at C8-atom is presented. Introduction of such modified residues into oligonucleotides lead to enhanced specificity of duplex formation towards complementary DNA and RNA targets with increased thermal and 3'-exonuclease stability. According to CD-spectroscopy studies G8AE-clamp does not substantially disrupt helix geometry. Primers containing G8AE-clamp demonstrated superior sensitivity in qPCR detection of dsRNA of Kemerovo virus in comparison to native oligonucleotides.


Assuntos
Guanosina/análogos & derivados , Oligonucleotídeos/síntese química , Orbivirus/genética , Oxazinas/química , RNA Viral/metabolismo , Dicroísmo Circular , Exonucleases/metabolismo , Guanosina/metabolismo , Simulação de Dinâmica Molecular , Conformação de Ácido Nucleico , Hibridização de Ácido Nucleico , Oligonucleotídeos/química , RNA de Cadeia Dupla/análise , RNA de Cadeia Dupla/genética , RNA de Cadeia Dupla/metabolismo , RNA Viral/genética , Reação em Cadeia da Polimerase em Tempo Real
18.
J Gen Virol ; 97(5): 1145-1157, 2016 05.
Artigo em Inglês | MEDLINE | ID: mdl-26763979

RESUMO

The process by which eukaryotic viruses with segmented genomes select a complete set of genome segments for packaging into progeny virus particles is not understood. In this study a model based on the association of genome segments through specific RNA-RNA interactions driven by base pairing was formalized and tested in the Orbivirus genus of the Reoviridae family. A strategy combining screening of the genomic sequences for inter-segment complementarity with direct functional testing of inter-segment RNA-RNA interactions using reverse genetics is described in the type species of the Orbivirus genus, Bluetongue virus (BTV). Two examples, involving four of the ten BTV genomic segments, of specific inter-segment interaction motifs whose maintenance is essential for the generation of infectious virus, were identified. Equivalent inter-segment complementarities were found between the identified regions of the orthologous genome segments of all orbiviruses, including phylogenetically distant species. Specific interaction of the participating RNA segments was confirmed in vitro using electrophoretic mobility shift assays, with the interactions inhibited using oligonucleotides complementary to the interaction motif of one of the interacting partners, and also through mutagenesis of the motifs. In each example, the base pairing rather than the absolute sequence was critical to the formation of a functional inter-segment interaction, with mutations only being tolerated in rescued virus if compensating changes were made in the interacting partner to restore uninterrupted base pairing. The absolute sequence of the complementarity motifs varied between species, indicating that this newly identified phenomenon may contribute to the observed lack of reassortment between Orbivirus species.


Assuntos
Genoma Viral , Orbivirus/fisiologia , Sequência de Bases , Biologia Computacional , Conformação de Ácido Nucleico , RNA Viral/fisiologia
19.
J Gen Virol ; 97(2): 411-421, 2016 Feb.
Artigo em Inglês | MEDLINE | ID: mdl-26644214

RESUMO

Orbiviruses are insect-transmitted, non-enveloped viruses with a ten-segmented dsRNA genome of which the bluetongue virus (BTV) is the prototype. Viral non-structural protein NS3/NS3a is encoded by genome segment 10 (Seg-10), and is involved in different virus release mechanisms. This protein induces specific release via membrane disruptions and budding in both insect and mammalian cells, but also the cytopathogenic release that is only seen in mammalian cells. NS3/NS3a is not essential for virus replication in vitro with BTV Seg-10 containing RNA elements essential for virus replication, even if protein is not expressed. Recently, new BTV serotypes with distinct NS3/NS3a sequence and cell tropism have been identified. Multiple studies have hinted at the importance of Seg-10 in orbivirus replication, but the exact prerequisites are still unknown. Here, more insight is obtained with regard to the needs for orbivirus Seg-10 and the balance between protein expression and RNA elements. Multiple silent mutations in the BTV NS3a ORF destabilized Seg-10, resulting in deletions and sequences originating from other viral segments being inserted, indicating strong selection at the level of RNA during replication in mammalian cells in vitro. The NS3a ORFs of other orbiviruses were successfully exchanged in BTV1 Seg-10, resulting in viable chimeric viruses. NS3/NS3a proteins in these chimeric viruses were generally functional in mammalian cells, but not in insect cells. NS3/NS3a of the novel BTV serotypes 25 and 26 affected virus release from Culicoides cells, which might be one of the reasons for their distinct cell tropism.


Assuntos
Regulação Viral da Expressão Gênica , Orbivirus/fisiologia , Proteínas não Estruturais Virais/biossíntese , Liberação de Vírus , Animais , Linhagem Celular , Ceratopogonidae , Instabilidade Genômica , Mamíferos , Mutação , RNA Viral/genética , Tropismo Viral
20.
BMC Vet Res ; 12: 88, 2016 Jun 04.
Artigo em Inglês | MEDLINE | ID: mdl-27259473

RESUMO

BACKGROUND: Within the last few decades Culicoides spp. (Diptera: Ceratopogonidae) emerged Europe-wide as a major vector for epizootic viral diseases e.g. caused by Bluetongue (BT) or Schmallenberg virus. In accordance with the EU regulation 1266/2007, veterinary authorities are requested to determine vector-free periods for loosing trade and movement restrictions of susceptible livestock. Additionally, the widely used basic reproduction number [Formula: see text] is optionally applied for risk assessment of vector-borne diseases. Values of R0 < 1 indicate periods with no disease transmission risk. For the determination of vector-free period and R0 a continuously operating daily Culicoides spp. monitoring in Vienna (Austria) was established. It covered the period 2009-2013 and depicts the seasonal vector abundance indoor and outdoor. Future BT and African horse sickness (AHS) outbreak risks were estimated by projecting R0 to climate change scenarios. Therefore, temperature-dependent vector parameters were applied. RESULTS: The vector-free period lasted about 100 days inside stables, while less than five Culicoides were trapped outdoors on 150 days per season, i.e. winter half year. Additionally, the potential outbreak risk was assessed for BT and AHS. For BT, a basic reproduction number of R0 > 1 was found each year between June and August. The periods without transmission risk, i.e. R0 < 1, were notably higher (200 days). Contrary, values of R0 < 1 were estimated for AHS during the whole period. Finally, the basic reproduction numbers were projected to the future by using temperature forecasts for the period 2014-2100. While the mean summer peak values for BT increase from of R0 = 2.3 to R0 = 3.4 until 2100 (1.1/100 years), no risk for AHS was estimated even under climate warming assumptions. CONCLUSIONS: Restrictions to trade and movement are always associated with an economic impact during epidemic diseases. To minimize these impacts, risk assessments based on the vector-free period or the basic reproduction number R0 can essentially support veterinary authorities to improve protection and control measurements.


Assuntos
Doença Equina Africana/epidemiologia , Bluetongue/epidemiologia , Ceratopogonidae/virologia , Insetos Vetores/virologia , Doença Equina Africana/prevenção & controle , Animais , Áustria , Bluetongue/prevenção & controle , Vírus Bluetongue , Clima , Surtos de Doenças/prevenção & controle , Surtos de Doenças/veterinária , Entomologia/métodos , Monitoramento Epidemiológico , Feminino , Cavalos , Masculino , Orbivirus , Orthobunyavirus , Dinâmica Populacional , Medição de Risco , Estações do Ano
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