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Role of a two-residue spacer in an alpha,beta-Didehydrophenylalanine containing hexapeptide: crystal and solution structure of Boc-val-deltaPhe-Leu-Ala-deltaPhe-Ala-OMe.
Padyana, Anil K; Ramakumar, S; Mathur, Puniti; Jagannathan, N R; Chauhan, V S.
Afiliação
  • Padyana AK; Department of Physics, Indian Institute of Science, Bangalore 560012, India
J Pept Sci ; 9(1): 54-63, 2003 Jan.
Article em En | MEDLINE | ID: mdl-12587883
ABSTRACT
The peptide Boc-Val1-deltaPhe2-Leu3-Ala4-deltaPhe5-Ala6-OMe has been examined for the structural consequence of placing a two-residue segment between the deltaPhe residues. The peptide is stabilized by four consecutive beta-turns. The overall conformation of the molecule is a right-handed 3(10)-helix, with average (phi, psi) values (-67.7 degrees, -22.7 degrees), unwound at the C-terminus. The 1H NMR results also suggest that the peptide maintains its 3(10)-helical structure in solution as observed in the crystal state. The crystal structure is stabilized through head-to-tail hydrogen bonds and a repertoire of aromatic interactions laterally directed between adjacent helices, which are antiparallel to each other. The aromatic ring of deltaPhe5 forms the hub of multicentred interactions, namely as a donor in aromatic C-H...pi and aromatic C-H...O=C interactions and as an acceptor in a CH3...pi interaction. The present structure uniquely illustrates the unusual capability of a deltaPhe ring to host such concerted interactions and suggests its exploitation in introducing long-range interactions in the folding of supersecondary structures.
Assuntos
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Coleções: 01-internacional Base de dados: MEDLINE Assunto principal: Peptídeos / Fenilalanina Idioma: En Revista: J Pept Sci Assunto da revista: BIOQUIMICA Ano de publicação: 2003 Tipo de documento: Article País de afiliação: Índia
Buscar no Google
Coleções: 01-internacional Base de dados: MEDLINE Assunto principal: Peptídeos / Fenilalanina Idioma: En Revista: J Pept Sci Assunto da revista: BIOQUIMICA Ano de publicação: 2003 Tipo de documento: Article País de afiliação: Índia