A semiparametric Bayesian model for detecting synchrony among multiple neurons.
Neural Comput
; 26(9): 2025-51, 2014 Sep.
Article
em En
| MEDLINE
| ID: mdl-24922500
ABSTRACT
We propose a scalable semiparametric Bayesian model to capture dependencies among multiple neurons by detecting their cofiring (possibly with some lag time) patterns over time. After discretizing time so there is at most one spike at each interval, the resulting sequence of 1s (spike) and 0s (silence) for each neuron is modeled using the logistic function of a continuous latent variable with a gaussian process prior. For multiple neurons, the corresponding marginal distributions are coupled to their joint probability distribution using a parametric copula model. The advantages of our approach are as follows. The nonparametric component (i.e., the gaussian process model) provides a flexible framework for modeling the underlying firing rates, and the parametric component (i.e., the copula model) allows us to make inferences regarding both contemporaneous and lagged relationships among neurons. Using the copula model, we construct multivariate probabilistic models by separating the modeling of univariate marginal distributions from the modeling of a dependence structure among variables. Our method is easy to implement using a computationally efficient sampling algorithm that can be easily extended to high-dimensional problems. Using simulated data, we show that our approach could correctly capture temporal dependencies in firing rates and identify synchronous neurons. We also apply our model to spike train data obtained from prefrontal cortical areas.
Texto completo:
1
Coleções:
01-internacional
Base de dados:
MEDLINE
Assunto principal:
Periodicidade
/
Processamento de Sinais Assistido por Computador
/
Potenciais de Ação
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Modelos Neurológicos
/
Neurônios
Tipo de estudo:
Health_economic_evaluation
/
Prognostic_studies
/
Risk_factors_studies
Limite:
Animals
Idioma:
En
Revista:
Neural Comput
Assunto da revista:
INFORMATICA MEDICA
Ano de publicação:
2014
Tipo de documento:
Article
País de afiliação:
Estados Unidos