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Draft Genome Sequences of Yersinia pestis Strains from the 1994 Plague Epidemic of Surat and 2002 Shimla Outbreak in India.
Mahale, Kiran N; Paranjape, Pradyumna S; Marathe, Nachiket P; Dhotre, Dhiraj P; Chowdhury, Somak; Shetty, Sudarshan A; Sharma, Avinash; Sharma, Kaushal; Tuteja, Urmil; Batra, Harsh V; Shouche, Yogesh S.
Afiliação
  • Mahale KN; Microbial Culture Collection, National Centre for Cell Science, University of Pune Campus, GaneshKhind, Pune, 411007 Maharashtra India.
  • Paranjape PS; Microbial Culture Collection, National Centre for Cell Science, University of Pune Campus, GaneshKhind, Pune, 411007 Maharashtra India.
  • Marathe NP; Microbial Culture Collection, National Centre for Cell Science, University of Pune Campus, GaneshKhind, Pune, 411007 Maharashtra India.
  • Dhotre DP; Microbial Culture Collection, National Centre for Cell Science, University of Pune Campus, GaneshKhind, Pune, 411007 Maharashtra India.
  • Chowdhury S; Microbial Culture Collection, National Centre for Cell Science, University of Pune Campus, GaneshKhind, Pune, 411007 Maharashtra India.
  • Shetty SA; Microbial Culture Collection, National Centre for Cell Science, University of Pune Campus, GaneshKhind, Pune, 411007 Maharashtra India.
  • Sharma A; Microbial Culture Collection, National Centre for Cell Science, University of Pune Campus, GaneshKhind, Pune, 411007 Maharashtra India.
  • Sharma K; Microbial Culture Collection, National Centre for Cell Science, University of Pune Campus, GaneshKhind, Pune, 411007 Maharashtra India.
  • Tuteja U; Microbiology Division, Defence Research and Development Establishment, Gwalior, Madhya Pradesh India.
  • Batra HV; Microbiology Division, Defence Food Research Laboratory, Mysore, Karnataka India.
  • Shouche YS; Microbial Culture Collection, National Centre for Cell Science, University of Pune Campus, GaneshKhind, Pune, 411007 Maharashtra India.
Indian J Microbiol ; 54(4): 480-2, 2014 Dec.
Article em En | MEDLINE | ID: mdl-25320451
ABSTRACT
We report the first draft genome sequences of the strains of plague-causing bacteria, Yersinia pestis, from India. These include two strains from the Surat epidemic (1994), one strain from the Shimla outbreak (2002) and one strain from the plague surveillance activity in the Deccan plateau region (1998). Genome size for all four strains is ~4.49 million bp with 139-147 contigs. Average sequencing depth for all four genomes was 21x.
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Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Idioma: En Revista: Indian J Microbiol Ano de publicação: 2014 Tipo de documento: Article

Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Idioma: En Revista: Indian J Microbiol Ano de publicação: 2014 Tipo de documento: Article