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Screening for Key Pathways Associated with the Development of Osteoporosis by Bioinformatics Analysis.
Liu, Yanqing; Wang, Yueqiu; Zhang, Yanxia; Liu, Zhiyong; Xiang, Hongfei; Peng, Xianbo; Chen, Bohua; Jia, Guyou.
Afiliação
  • Liu Y; Department of Geriatric Medicine, Jining No. 1 People's Hospital, Jining, Shandong 272011, China.
  • Wang Y; Department of Joint Branch, Jining No. 2 People's Hospital, Jining, Shandong 272000, China.
  • Zhang Y; Department of Public Health, Jining Psychiatric Hospital, Jining, Shandong 272000, China.
  • Liu Z; Department of Prevention and Health, Center for Disease Control and Prevention of Jining City, Jining, Shandong 272000, China.
  • Xiang H; Department of Spine Surgery, The Affiliated Hospital of Qingdao University, Qingdao, Shandong 266003, China.
  • Peng X; Department of Orthopedics, Shandong Provincial Qianfoshan Hospital, Shandong University, Jinan, Shandong 250014, China.
  • Chen B; Department of Spine Surgery, The Affiliated Hospital of Qingdao University, Qingdao, Shandong 266003, China.
  • Jia G; Department of Joint Branch, Jining No. 2 People's Hospital, Jining, Shandong 272000, China.
Biomed Res Int ; 2017: 8589347, 2017.
Article em En | MEDLINE | ID: mdl-28466021
Objectives. We aimed to find the key pathways associated with the development of osteoporosis. Methods. We downloaded expression profile data of GSE35959 and analyzed the differentially expressed genes (DEGs) in 3 comparison groups (old_op versus middle, old_op versus old, and old_op versus senescent). KEGG (Kyoto Encyclopedia of Genes and Genomes) pathway enrichment analyses were carried out. Besides, Venn diagram analysis and gene functional interaction (FI) network analysis were performed. Results. Totally 520 DEGs, 966 DEGs, and 709 DEGs were obtained in old_op versus middle, old_op versus old, and old_op versus senescent groups, respectively. Lysosome pathway was the significantly enriched pathways enriched by intersection genes. The pathways enriched by subnetwork modules suggested that mitotic metaphase and anaphase and signaling by Rho GTPases in module 1 had more proteins from module. Conclusions. Lysosome pathway, mitotic metaphase and anaphase, and signaling by Rho GTPases may be involved in the development of osteoporosis. Furthermore, Rho GTPases may regulate the balance of bone resorption and bone formation via controlling osteoclast and osteoblast. These 3 pathways may be regarded as the treatment targets for osteoporosis.
Assuntos

Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Assunto principal: Osteoporose / Biologia Computacional / Redes Reguladoras de Genes / Mapas de Interação de Proteínas Tipo de estudo: Diagnostic_studies / Risk_factors_studies / Screening_studies Limite: Humans Idioma: En Revista: Biomed Res Int Ano de publicação: 2017 Tipo de documento: Article País de afiliação: China

Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Assunto principal: Osteoporose / Biologia Computacional / Redes Reguladoras de Genes / Mapas de Interação de Proteínas Tipo de estudo: Diagnostic_studies / Risk_factors_studies / Screening_studies Limite: Humans Idioma: En Revista: Biomed Res Int Ano de publicação: 2017 Tipo de documento: Article País de afiliação: China