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Large scale meta-analysis characterizes genetic architecture for common psoriasis associated variants.
Tsoi, Lam C; Stuart, Philip E; Tian, Chao; Gudjonsson, Johann E; Das, Sayantan; Zawistowski, Matthew; Ellinghaus, Eva; Barker, Jonathan N; Chandran, Vinod; Dand, Nick; Duffin, Kristina Callis; Enerbäck, Charlotta; Esko, Tõnu; Franke, Andre; Gladman, Dafna D; Hoffmann, Per; Kingo, Külli; Kõks, Sulev; Krueger, Gerald G; Lim, Henry W; Metspalu, Andres; Mrowietz, Ulrich; Mucha, Sören; Rahman, Proton; Reis, Andre; Tejasvi, Trilokraj; Trembath, Richard; Voorhees, John J; Weidinger, Stephan; Weichenthal, Michael; Wen, Xiaoquan; Eriksson, Nicholas; Kang, Hyun M; Hinds, David A; Nair, Rajan P; Abecasis, Gonçalo R; Elder, James T.
Afiliação
  • Tsoi LC; Department of Dermatology, University of Michigan Medical School, Ann Arbor, Michigan 48109, USA.
  • Stuart PE; Department of Biostatistics, Center for Statistical Genetics, University of Michigan, Ann Arbor, Michigan 48109, USA.
  • Tian C; Department of Computational Medicine &Bioinformatics, University of Michigan Medical School, Ann Arbor, Michigan 48109, USA.
  • Gudjonsson JE; Department of Dermatology, University of Michigan Medical School, Ann Arbor, Michigan 48109, USA.
  • Das S; 23andMe, Inc., Mountain View, California 94041, USA.
  • Zawistowski M; Department of Dermatology, University of Michigan Medical School, Ann Arbor, Michigan 48109, USA.
  • Ellinghaus E; Department of Biostatistics, Center for Statistical Genetics, University of Michigan, Ann Arbor, Michigan 48109, USA.
  • Barker JN; Department of Biostatistics, Center for Statistical Genetics, University of Michigan, Ann Arbor, Michigan 48109, USA.
  • Chandran V; Institute of Clinical Molecular Biology, Christian-Albrechts-University of Kiel, Kiel 24105, Germany.
  • Dand N; St John's Institute of Dermatology, Division of Genetics and Molecular Medicine, Faculty of Life Sciences and Medicine, King's College London, London SE1 9RT, UK.
  • Duffin KC; Department of Medicine, Division of Rheumatology, University of Toronto, Toronto, Ontario, Canada M5S 1A8.
  • Enerbäck C; Centre for Prognosis Studies in the Rheumatic Diseases, Toronto Western Research Institute, University of Toronto, Toronto, Ontario, Canada M5T 2S8.
  • Esko T; St John's Institute of Dermatology, Division of Genetics and Molecular Medicine, Faculty of Life Sciences and Medicine, King's College London, London SE1 9RT, UK.
  • Franke A; Department of Dermatology, University of Utah, Salt Lake City, Utah 84132, USA.
  • Gladman DD; Department of Dermatology, Linköping University, Linköping SE-581 83, Sweden.
  • Hoffmann P; Estonian Genome Center, University of Tartu, Tartu 51010, Estonia.
  • Kingo K; Broad Institute of MIT and Harvard, Cambridge, Massachusetts 02142, USA.
  • Kõks S; Institute of Clinical Molecular Biology, Christian-Albrechts-University of Kiel, Kiel 24105, Germany.
  • Krueger GG; Department of Medicine, Division of Rheumatology, University of Toronto, Toronto, Ontario, Canada M5S 1A8.
  • Lim HW; Centre for Prognosis Studies in the Rheumatic Diseases, Toronto Western Research Institute, University of Toronto, Toronto, Ontario, Canada M5T 2S8.
  • Metspalu A; Institute of Human Genetics, University of Bonn, Bonn 53127, Germany.
  • Mrowietz U; Division of Medical Genetics, Department of Biomedicine, University of Basel, Basel 4031, Switzerland.
  • Mucha S; Dermatology Clinic, Tartu University Hospital, Department of Dermatology and Venereology, University of Tartu, Tartu 50417, Estonia.
  • Rahman P; Department of Pathophysiology, Centre of Translational Medicine and Centre for Translational Genomics, University of Tartu, Tartu 50411, Estonia.
  • Reis A; Department of Reproductive Biology, Estonian University of Life Sciences, Tartu 51006, Estonia.
  • Tejasvi T; Department of Dermatology, University of Utah, Salt Lake City, Utah 84132, USA.
  • Trembath R; Department of Dermatology, Henry Ford Hospital, Detroit, Michigan 48202, USA.
  • Voorhees JJ; Estonian Genome Center, University of Tartu, Tartu 51010, Estonia.
  • Weidinger S; Department of Dermatology, University Medical Center Schleswig-Holstein, Campus Kiel, Kiel 24105, Germany.
  • Weichenthal M; Institute of Clinical Molecular Biology, Christian-Albrechts-University of Kiel, Kiel 24105, Germany.
  • Wen X; Memorial University, St. John's, Newfoundland, Newfoundland and Labrador, Canada A1B 3X9.
  • Eriksson N; Institute of Human Genetics, FAU Erlangen-Nürnberg, Erlangen 91054, Germany.
  • Kang HM; Department of Dermatology, University of Michigan Medical School, Ann Arbor, Michigan 48109, USA.
  • Hinds DA; Ann Arbor Veterans Affairs Hospital, Ann Arbor, Michigan 48105, USA.
  • Nair RP; Department of Medical and Molecular Genetics, King's College London, London WC2R 2LS, UK.
  • Abecasis GR; Department of Dermatology, University of Michigan Medical School, Ann Arbor, Michigan 48109, USA.
  • Elder JT; Department of Dermatology, University Medical Center Schleswig-Holstein, Campus Kiel, Kiel 24105, Germany.
Nat Commun ; 8: 15382, 2017 05 24.
Article em En | MEDLINE | ID: mdl-28537254
Psoriasis is a complex disease of skin with a prevalence of about 2%. We conducted the largest meta-analysis of genome-wide association studies (GWAS) for psoriasis to date, including data from eight different Caucasian cohorts, with a combined effective sample size >39,000 individuals. We identified 16 additional psoriasis susceptibility loci achieving genome-wide significance, increasing the number of identified loci to 63 for European-origin individuals. Functional analysis highlighted the roles of interferon signalling and the NFκB cascade, and we showed that the psoriasis signals are enriched in regulatory elements from different T cells (CD8+ T-cells and CD4+ T-cells including TH0, TH1 and TH17). The identified loci explain ∼28% of the genetic heritability and generate a discriminatory genetic risk score (AUC=0.76 in our sample) that is significantly correlated with age at onset (p=2 × 10-89). This study provides a comprehensive layout for the genetic architecture of common variants for psoriasis.
Assuntos

Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Assunto principal: Psoríase / Predisposição Genética para Doença / População Branca / Estudo de Associação Genômica Ampla / Loci Gênicos Tipo de estudo: Prognostic_studies / Risk_factors_studies / Systematic_reviews Limite: Humans Idioma: En Revista: Nat Commun Assunto da revista: BIOLOGIA / CIENCIA Ano de publicação: 2017 Tipo de documento: Article País de afiliação: Estados Unidos

Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Assunto principal: Psoríase / Predisposição Genética para Doença / População Branca / Estudo de Associação Genômica Ampla / Loci Gênicos Tipo de estudo: Prognostic_studies / Risk_factors_studies / Systematic_reviews Limite: Humans Idioma: En Revista: Nat Commun Assunto da revista: BIOLOGIA / CIENCIA Ano de publicação: 2017 Tipo de documento: Article País de afiliação: Estados Unidos