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J-Resolved 1H NMR 1D-Projections for Large-Scale Metabolic Phenotyping Studies: Application to Blood Plasma Analysis.
Rodriguez-Martinez, Andrea; Posma, Joram M; Ayala, Rafael; Harvey, Nikita; Jimenez, Beatriz; Neves, Ana L; Lindon, John C; Sonomura, Kazuhiro; Sato, Taka-Aki; Matsuda, Fumihiko; Zalloua, Pierre; Gauguier, Dominique; Nicholson, Jeremy K; Dumas, Marc-Emmanuel.
Afiliação
  • Rodriguez-Martinez A; Computational and Systems Medicine, Department of Surgery and Cancer, Imperial College London , London SW7 2AZ, U.K.
  • Posma JM; Computational and Systems Medicine, Department of Surgery and Cancer, Imperial College London , London SW7 2AZ, U.K.
  • Ayala R; Computational and Systems Medicine, Department of Surgery and Cancer, Imperial College London , London SW7 2AZ, U.K.
  • Harvey N; Computational and Systems Medicine, Department of Surgery and Cancer, Imperial College London , London SW7 2AZ, U.K.
  • Jimenez B; Computational and Systems Medicine, Department of Surgery and Cancer, Imperial College London , London SW7 2AZ, U.K.
  • Neves AL; Computational and Systems Medicine, Department of Surgery and Cancer, Imperial College London , London SW7 2AZ, U.K.
  • Lindon JC; Computational and Systems Medicine, Department of Surgery and Cancer, Imperial College London , London SW7 2AZ, U.K.
  • Sonomura K; Life Science Research Center, Technology Research Laboratory, Shimadzu Corporation , Kyoto 604-8511, Japan.
  • Sato TA; Center for Genomic Medicine, Kyoto University Graduate School of Medicine , Kyoto 606-8501, Japan.
  • Matsuda F; Life Science Research Center, Technology Research Laboratory, Shimadzu Corporation , Kyoto 604-8511, Japan.
  • Zalloua P; Center for Genomic Medicine, Kyoto University Graduate School of Medicine , Kyoto 606-8501, Japan.
  • Gauguier D; Center for Genomic Medicine, Kyoto University Graduate School of Medicine , Kyoto 606-8501, Japan.
  • Nicholson JK; School of Medicine, Lebanese American University , Beirut 1102 2801, Lebanon.
  • Dumas ME; Computational and Systems Medicine, Department of Surgery and Cancer, Imperial College London , London SW7 2AZ, U.K.
Anal Chem ; 89(21): 11405-11412, 2017 11 07.
Article em En | MEDLINE | ID: mdl-28937204
ABSTRACT
1H nuclear magnetic resonance (NMR) spectroscopy-based metabolic phenotyping is now widely used for large-scale epidemiological applications. To minimize signal overlap present in 1D 1H NMR spectra, we have investigated the use of 2D J-resolved (JRES) 1H NMR spectroscopy for large-scale phenotyping studies. In particular, we have evaluated the use of the 1D projections of the 2D JRES spectra (pJRES), which provide single peaks for each of the J-coupled multiplets, using 705 human plasma samples from the FGENTCARD cohort. On the basis of the assessment of several objective analytical criteria (spectral dispersion, attenuation of macromolecular signals, cross-spectral correlation with GC-MS metabolites, analytical reproducibility and biomarker discovery potential), we concluded that the pJRES approach exhibits suitable properties for implementation in large-scale molecular epidemiology workflows.
Assuntos

Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Assunto principal: Fenótipo / Plasma / Metabolômica / Espectroscopia de Prótons por Ressonância Magnética Tipo de estudo: Prognostic_studies Limite: Female / Humans / Male Idioma: En Revista: Anal Chem Ano de publicação: 2017 Tipo de documento: Article País de afiliação: Reino Unido

Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Assunto principal: Fenótipo / Plasma / Metabolômica / Espectroscopia de Prótons por Ressonância Magnética Tipo de estudo: Prognostic_studies Limite: Female / Humans / Male Idioma: En Revista: Anal Chem Ano de publicação: 2017 Tipo de documento: Article País de afiliação: Reino Unido