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Giant tortoise genomes provide insights into longevity and age-related disease.
Quesada, Víctor; Freitas-Rodríguez, Sandra; Miller, Joshua; Pérez-Silva, José G; Jiang, Zi-Feng; Tapia, Washington; Santiago-Fernández, Olaya; Campos-Iglesias, Diana; Kuderna, Lukas F K; Quinzin, Maud; Álvarez, Miguel G; Carrero, Dido; Beheregaray, Luciano B; Gibbs, James P; Chiari, Ylenia; Glaberman, Scott; Ciofi, Claudio; Araujo-Voces, Miguel; Mayoral, Pablo; Arango, Javier R; Tamargo-Gómez, Isaac; Roiz-Valle, David; Pascual-Torner, María; Evans, Benjamin R; Edwards, Danielle L; Garrick, Ryan C; Russello, Michael A; Poulakakis, Nikos; Gaughran, Stephen J; Rueda, Danny O; Bretones, Gabriel; Marquès-Bonet, Tomàs; White, Kevin P; Caccone, Adalgisa; López-Otín, Carlos.
Afiliação
  • Quesada V; Departamento de Bioquímica y Biología Molecular, Instituto Universitario de Oncología del Principado de Asturias, CIBERONC, Universidad de Oviedo, Oviedo, Spain.
  • Freitas-Rodríguez S; Departamento de Bioquímica y Biología Molecular, Instituto Universitario de Oncología del Principado de Asturias, CIBERONC, Universidad de Oviedo, Oviedo, Spain.
  • Miller J; Department of Ecology and Evolutionary Biology, Yale University, New Haven, CT, USA.
  • Pérez-Silva JG; Departamento de Bioquímica y Biología Molecular, Instituto Universitario de Oncología del Principado de Asturias, CIBERONC, Universidad de Oviedo, Oviedo, Spain.
  • Jiang ZF; Institute for Genomics and Systems Biology, The University of Chicago, Chicago, IL, USA.
  • Tapia W; Galapagos National Park Directorate, Galapagos Islands, Ecuador.
  • Santiago-Fernández O; Galapagos Conservancy, Fairfax, VA, USA.
  • Campos-Iglesias D; Departamento de Bioquímica y Biología Molecular, Instituto Universitario de Oncología del Principado de Asturias, CIBERONC, Universidad de Oviedo, Oviedo, Spain.
  • Kuderna LFK; Departamento de Bioquímica y Biología Molecular, Instituto Universitario de Oncología del Principado de Asturias, CIBERONC, Universidad de Oviedo, Oviedo, Spain.
  • Quinzin M; Institute of Evolutionary Biology (UPF-CSIC), Barcelona, Spain.
  • Álvarez MG; CNAG-CRG, Centre for Genomic Regulation, Barcelona Institute of Science and Technology , Barcelona, Spain.
  • Carrero D; Department of Ecology and Evolutionary Biology, Yale University, New Haven, CT, USA.
  • Beheregaray LB; Departamento de Bioquímica y Biología Molecular, Instituto Universitario de Oncología del Principado de Asturias, CIBERONC, Universidad de Oviedo, Oviedo, Spain.
  • Gibbs JP; Departamento de Bioquímica y Biología Molecular, Instituto Universitario de Oncología del Principado de Asturias, CIBERONC, Universidad de Oviedo, Oviedo, Spain.
  • Chiari Y; College of Science and Engineering, Flinders University, Adelaide, South Australia, Australia.
  • Glaberman S; College of Environmental Science and Forestry, State University of New York, Syracuse, NY, USA.
  • Ciofi C; Department of Biology, University of South Alabama, Mobile, AL, USA.
  • Araujo-Voces M; Department of Biology, University of South Alabama, Mobile, AL, USA.
  • Mayoral P; Department of Biology, University of Florence, Florence, Italy.
  • Arango JR; Departamento de Bioquímica y Biología Molecular, Instituto Universitario de Oncología del Principado de Asturias, CIBERONC, Universidad de Oviedo, Oviedo, Spain.
  • Tamargo-Gómez I; Departamento de Bioquímica y Biología Molecular, Instituto Universitario de Oncología del Principado de Asturias, CIBERONC, Universidad de Oviedo, Oviedo, Spain.
  • Roiz-Valle D; Departamento de Bioquímica y Biología Molecular, Instituto Universitario de Oncología del Principado de Asturias, CIBERONC, Universidad de Oviedo, Oviedo, Spain.
  • Pascual-Torner M; Departamento de Bioquímica y Biología Molecular, Instituto Universitario de Oncología del Principado de Asturias, CIBERONC, Universidad de Oviedo, Oviedo, Spain.
  • Evans BR; Departamento de Bioquímica y Biología Molecular, Instituto Universitario de Oncología del Principado de Asturias, CIBERONC, Universidad de Oviedo, Oviedo, Spain.
  • Edwards DL; Departamento de Bioquímica y Biología Molecular, Instituto Universitario de Oncología del Principado de Asturias, CIBERONC, Universidad de Oviedo, Oviedo, Spain.
  • Garrick RC; Department of Ecology and Evolutionary Biology, Yale University, New Haven, CT, USA.
  • Russello MA; School of Natural Sciences, University of California, Merced, CA, USA.
  • Poulakakis N; Department of Biology, University of Mississippi, Oxford, MS, USA.
  • Gaughran SJ; Department of Biology, The University of British Columbia, Kelowna, British Columbia, Canada.
  • Rueda DO; Department of Biology, School of Sciences and Engineering, University of Crete, Heraklion, Greece.
  • Bretones G; Natural History Museum of Crete, Heraklion, Greece.
  • Marquès-Bonet T; Department of Ecology and Evolutionary Biology, Yale University, New Haven, CT, USA.
  • White KP; Galapagos National Park Directorate, Galapagos Islands, Ecuador.
  • Caccone A; Departamento de Bioquímica y Biología Molecular, Instituto Universitario de Oncología del Principado de Asturias, CIBERONC, Universidad de Oviedo, Oviedo, Spain.
  • López-Otín C; Institute of Evolutionary Biology (UPF-CSIC), Barcelona, Spain.
Nat Ecol Evol ; 3(1): 87-95, 2019 01.
Article em En | MEDLINE | ID: mdl-30510174
ABSTRACT
Giant tortoises are among the longest-lived vertebrate animals and, as such, provide an excellent model to study traits like longevity and age-related diseases. However, genomic and molecular evolutionary information on giant tortoises is scarce. Here, we describe a global analysis of the genomes of Lonesome George-the iconic last member of Chelonoidis abingdonii-and the Aldabra giant tortoise (Aldabrachelys gigantea). Comparison of these genomes with those of related species, using both unsupervised and supervised analyses, led us to detect lineage-specific variants affecting DNA repair genes, inflammatory mediators and genes related to cancer development. Our study also hints at specific evolutionary strategies linked to increased lifespan, and expands our understanding of the genomic determinants of ageing. These new genome sequences also provide important resources to help the efforts for restoration of giant tortoise populations.
Assuntos

Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Assunto principal: Tartarugas / Envelhecimento / Genoma Limite: Animals / Humans / Male Idioma: En Revista: Nat Ecol Evol Ano de publicação: 2019 Tipo de documento: Article País de afiliação: Espanha

Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Assunto principal: Tartarugas / Envelhecimento / Genoma Limite: Animals / Humans / Male Idioma: En Revista: Nat Ecol Evol Ano de publicação: 2019 Tipo de documento: Article País de afiliação: Espanha