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A molecular dynamics study proposing the existence of statistical structural heterogeneity due to chain orientation in the POPC-cholesterol bilayer.
Favela-Rosales, Fernando; Galván-Hernández, Arturo; Hernández-Cobos, Jorge; Kobayashi, Naritaka; Carbajal-Tinoco, Mauricio D; Nakabayashi, Seiichiro; Ortega-Blake, Iván.
Afiliação
  • Favela-Rosales F; Departamento de Física, Centro de Investigación y de Estudios Avanzados, Av. IPN No. 2508, México, DF, 07360, Mexico; Tecnológico Nacional de México, Campus Zacatecas Occidente, Ave. Tecnológico No. 2000, Col. Loma la Perla, Sombrerete, Zacatecas, 99102, Mexico.
  • Galván-Hernández A; Departamento de Física, Centro de Investigación y de Estudios Avanzados, Av. IPN No. 2508, México, DF, 07360, Mexico.
  • Hernández-Cobos J; Instituto de Ciencias Físicas, Universidad Nacional Autónoma de México Av. Universidad s/n Cuernavaca, Morelos, 62251, Mexico.
  • Kobayashi N; Department of Chemistry, Faculty of Science, Saitama University, Shimo-Ohkubo 255, Sakura-Ku, Saitama City, 338-8570, Japan.
  • Carbajal-Tinoco MD; Departamento de Física, Centro de Investigación y de Estudios Avanzados, Av. IPN No. 2508, México, DF, 07360, Mexico.
  • Nakabayashi S; Department of Chemistry, Faculty of Science, Saitama University, Shimo-Ohkubo 255, Sakura-Ku, Saitama City, 338-8570, Japan.
  • Ortega-Blake I; Instituto de Ciencias Físicas, Universidad Nacional Autónoma de México Av. Universidad s/n Cuernavaca, Morelos, 62251, Mexico. Electronic address: ivan@icf.unam.mx.
Biophys Chem ; 257: 106275, 2020 02.
Article em En | MEDLINE | ID: mdl-31790909
ABSTRACT
We performed molecular dynamics simulations of a lipid bilayer consisting of POPC and cholesterol at temperatures from 283 to 308K and cholesterol concentrations from 0 to 50% mol/mol. The purpose of this study was to look for the existence of structural differences in the region delimited by these parameters and, in particular, in a region where coexistence of liquid disordered and liquid ordered phases has been proposed. Our interest in this range of concentration and temperature responds to the fact that polyene ionophore activity varies considerably along it. Two force fields, CHARMM36 and Slipids, were compared in order to determine the most suitable. Both force fields predict non-monotonic behaviors consistent with the existence of phase transitions. We found the presence of lateral structural heterogeneity, statistical in nature, in some of the bilayers occurring in this range of temperatures and sterol concentrations. This heterogeneity was produced by correlated ordering of the POPC tails and not due to cholesterol enrichment, and lasts for tens of nanoseconds. We relate these observations to the action of polyenes in these membranes.
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Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Assunto principal: Fosfatidilcolinas / Colesterol / Simulação de Dinâmica Molecular / Bicamadas Lipídicas Idioma: En Revista: Biophys Chem Ano de publicação: 2020 Tipo de documento: Article País de afiliação: México

Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Assunto principal: Fosfatidilcolinas / Colesterol / Simulação de Dinâmica Molecular / Bicamadas Lipídicas Idioma: En Revista: Biophys Chem Ano de publicação: 2020 Tipo de documento: Article País de afiliação: México