CIRCexplorer pipelines for circRNA annotation and quantification from non-polyadenylated RNA-seq datasets.

Ma, Xu-Kai; Xue, Wei; Chen, Ling-Ling; Yang, Li

Ma, Xu-Kai; Xue, Wei; Chen, Ling-Ling; Yang, Li.

Afiliação

Ma XK; CAS Key Laboratory of Computational Biology, Shanghai Institute of Nutrition and Health, University of Chinese Academy of Sciences, Chinese Academy of Sciences, 320 Yueyang Road, Shanghai 200031, China.
Xue W; CAS Key Laboratory of Computational Biology, Shanghai Institute of Nutrition and Health, University of Chinese Academy of Sciences, Chinese Academy of Sciences, 320 Yueyang Road, Shanghai 200031, China.
Chen LL; State Key Laboratory of Molecular Biology, Shanghai Key Laboratory of Molecular Andrology, CAS Center for Excellence in Molecular Cell Science, Shanghai Institute of Biochemistry and Cell Biology, University of Chinese Academy of Sciences, Chinese Academy of Sciences, 320 Yueyang Road, Shanghai 2000
Yang L; CAS Key Laboratory of Computational Biology, Shanghai Institute of Nutrition and Health, University of Chinese Academy of Sciences, Chinese Academy of Sciences, 320 Yueyang Road, Shanghai 200031, China; School of Life Science and Technology, ShanghaiTech University, 393 Middle Huaxia Road, Shanghai

Methods ; 196: 3-10, 2021 12.

Article em En | MEDLINE | ID: mdl-33588028

Assuntos

RNA Circular; RNA; Biologia Computacional; Éxons; RNA/genética; Splicing de RNA; RNA Circular/genética

Palavras-chave

Alternative back-splicing; CIRCexplorer; CircRNA; Circular RNA; Non-polyadenylated RNA-seq

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Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Assunto principal: RNA / RNA Circular Idioma: En Revista: Methods Assunto da revista: BIOQUIMICA Ano de publicação: 2021 Tipo de documento: Article País de afiliação: China

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