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Connection between the Bacterial Chemotactic Network and Optimal Filtering.
Nakamura, Kento; Kobayashi, Tetsuya J.
Afiliação
  • Nakamura K; Department of Mathematical Informatics, Graduate School of Information Science and Technology, The University of Tokyo, Tokyo 113-8654, Japan.
  • Kobayashi TJ; Department of Mathematical Informatics, Graduate School of Information Science and Technology, The University of Tokyo, Tokyo 113-8654, Japan.
Phys Rev Lett ; 126(12): 128102, 2021 Mar 26.
Article em En | MEDLINE | ID: mdl-33834835
The chemotactic network of Escherichia coli has been studied extensively both biophysically and information theoretically. Nevertheless, connection between these two aspects is still elusive. In this work, we report such a connection. We derive an optimal filtering dynamics under the assumption that E. coli's sensory system optimally infers the binary information whether it is swimming up or down along an exponential ligand gradient from noisy sensory signals. Then we show that a standard biochemical model of the chemotactic network is mathematically equivalent to this information-theoretically optimal dynamics. Moreover, we demonstrate that an experimentally observed nonlinear response relation can be reproduced from the optimal dynamics. These results suggest that the biochemical network of E. coli chemotaxis is designed to optimally extract the binary information along an exponential gradient in a noisy condition.
Assuntos

Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Assunto principal: Quimiotaxia / Escherichia coli / Modelos Biológicos Idioma: En Revista: Phys Rev Lett Ano de publicação: 2021 Tipo de documento: Article País de afiliação: Japão

Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Assunto principal: Quimiotaxia / Escherichia coli / Modelos Biológicos Idioma: En Revista: Phys Rev Lett Ano de publicação: 2021 Tipo de documento: Article País de afiliação: Japão