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Quantum Cascade Laser-Based Infrared Imaging as a Label-Free and Automated Approach to Determine Mutations in Lung Adenocarcinoma.
Goertzen, Nina; Pappesch, Roberto; Fassunke, Jana; Brüning, Thomas; Ko, Yon-Dschun; Schmidt, Joachim; Großerueschkamp, Frederik; Buettner, Reinhard; Gerwert, Klaus.
Afiliação
  • Goertzen N; Center for Protein Diagnostics, Biospectroscopy, Germany; Department of Biophysics, Faculty of Biology and Biotechnology, Ruhr University Bochum, Bochum, Germany.
  • Pappesch R; Institut für Pathologie, Universitätsklinikum Köln, Germany.
  • Fassunke J; Institut für Pathologie, Universitätsklinikum Köln, Germany.
  • Brüning T; Institute for Prevention and Occupational Medicine of the German Social Accident Insurance, Institute of the Ruhr University Bochum, Bochum, Germany.
  • Ko YD; Department of Internal Medicine, Johanniter-Kliniken Bonn GmbH, Johanniter Krankenhaus, Bonn, Germany.
  • Schmidt J; Lung Cancer Center Bonn, Department of Thoracic Surgery, Helios Klinikum Bonn/Rhein-Sieg and Department of Surgery, Division of Thoracic Surgery, Universitätsklinikum Bonn, Germany.
  • Großerueschkamp F; Center for Protein Diagnostics, Biospectroscopy, Germany; Department of Biophysics, Faculty of Biology and Biotechnology, Ruhr University Bochum, Bochum, Germany.
  • Buettner R; Institut für Pathologie, Universitätsklinikum Köln, Germany.
  • Gerwert K; Center for Protein Diagnostics, Biospectroscopy, Germany; Department of Biophysics, Faculty of Biology and Biotechnology, Ruhr University Bochum, Bochum, Germany. Electronic address: klaus.gerwert@ruhr-uni-bochum.de.
Am J Pathol ; 191(7): 1269-1280, 2021 07.
Article em En | MEDLINE | ID: mdl-34004158
Therapeutic decisions in lung cancer critically depend on the determination of histologic types and oncogene mutations. Therefore, tumor samples are subjected to standard histologic and immunohistochemical analyses and examined for relevant mutations using comprehensive molecular diagnostics. In this study, an alternative diagnostic approach for automatic and label-free detection of mutations in lung adenocarcinoma tissue using quantum cascade laser-based infrared imaging is presented. For this purpose, a five-step supervised classification algorithm was developed, which was not only able to detect tissue types and tumor lesions, but also the tumor type and mutation status of adenocarcinomas. Tumor detection was verified on a data set of 214 patient samples with a specificity of 97% and a sensitivity of 95%. Furthermore, histology typing was verified on samples from 203 of the 214 patients with a specificity of 97% and a sensitivity of 94% for adenocarcinoma. The most frequently occurring mutations in adenocarcinoma (KRAS, EGFR, and TP53) were differentiated by this technique. Detection of mutations was verified in 60 patient samples from the data set with a sensitivity and specificity of 95% for each mutation. This demonstrates that quantum cascade laser infrared imaging can be used to analyze morphologic differences as well as molecular changes. Therefore, this single, one-step measurement provides comprehensive diagnostics of lung cancer histology types and most frequent mutations.
Assuntos

Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Assunto principal: Análise Mutacional de DNA / Espectroscopia de Infravermelho com Transformada de Fourier / Lasers Semicondutores / Adenocarcinoma de Pulmão / Neoplasias Pulmonares Tipo de estudo: Diagnostic_studies Limite: Aged / Aged80 / Female / Humans / Male / Middle aged Idioma: En Revista: Am J Pathol Ano de publicação: 2021 Tipo de documento: Article País de afiliação: Alemanha

Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Assunto principal: Análise Mutacional de DNA / Espectroscopia de Infravermelho com Transformada de Fourier / Lasers Semicondutores / Adenocarcinoma de Pulmão / Neoplasias Pulmonares Tipo de estudo: Diagnostic_studies Limite: Aged / Aged80 / Female / Humans / Male / Middle aged Idioma: En Revista: Am J Pathol Ano de publicação: 2021 Tipo de documento: Article País de afiliação: Alemanha