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Documenting elimination of co-circulating COVID-19 clusters using genomics in New South Wales, Australia.
Arnott, Alicia; Draper, Jenny; Rockett, Rebecca J; Lam, Connie; Sadsad, Rosemarie; Gall, Mailie; Martinez, Elena; Byun, Roy; Musto, Jennie; Marais, Ben; Chen, Sharon C-A; Kok, Jen; Dwyer, Dominic E; Sintchenko, Vitali.
Afiliação
  • Arnott A; Centre for Infectious Diseases and Microbiology Laboratory Services, NSW Health Pathology - Institute of Clinical Pathology and Medical Research, Westmead, NSW, Australia.
  • Draper J; Sydney Institute for Infectious Diseases, The University of Sydney, Sydney, NSW, Australia.
  • Rockett RJ; Centre for Infectious Diseases and Microbiology - Public Health, Westmead Hospital, Sydney, NSW, Australia.
  • Lam C; Centre for Infectious Diseases and Microbiology Laboratory Services, NSW Health Pathology - Institute of Clinical Pathology and Medical Research, Westmead, NSW, Australia.
  • Sadsad R; Sydney Institute for Infectious Diseases, The University of Sydney, Sydney, NSW, Australia.
  • Gall M; Centre for Infectious Diseases and Microbiology - Public Health, Westmead Hospital, Sydney, NSW, Australia.
  • Martinez E; Sydney Institute for Infectious Diseases, The University of Sydney, Sydney, NSW, Australia.
  • Byun R; Centre for Infectious Diseases and Microbiology - Public Health, Westmead Hospital, Sydney, NSW, Australia.
  • Musto J; Centre for Infectious Diseases and Microbiology - Public Health, Westmead Hospital, Sydney, NSW, Australia.
  • Marais B; Sydney Informatics Hub, Core Research Facilities, The University of Sydney, Sydney, NSW, Australia.
  • Chen SC; Centre for Infectious Diseases and Microbiology Laboratory Services, NSW Health Pathology - Institute of Clinical Pathology and Medical Research, Westmead, NSW, Australia.
  • Kok J; Centre for Infectious Diseases and Microbiology Laboratory Services, NSW Health Pathology - Institute of Clinical Pathology and Medical Research, Westmead, NSW, Australia.
  • Dwyer DE; Centre for Infectious Diseases and Microbiology - Public Health, Westmead Hospital, Sydney, NSW, Australia.
  • Sintchenko V; Health Protection New South Wales, NSW Ministry of Health, Sydney, NSW, Australia.
BMC Res Notes ; 14(1): 415, 2021 Nov 17.
Article em En | MEDLINE | ID: mdl-34789337
ABSTRACT

OBJECTIVE:

To adapt 'fishplots' to describe real-time evolution of SARS-CoV-2 genomic clusters.

RESULTS:

This novel analysis adapted the fishplot to depict the size and duration of circulating genomic clusters over time in New South Wales, Australia. It illuminated the effectiveness of interventions on the emergence, spread and eventual elimination of clusters and distilled genomic data into clear information to inform public health action.
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Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Assunto principal: COVID-19 Limite: Humans País/Região como assunto: Oceania Idioma: En Revista: BMC Res Notes Ano de publicação: 2021 Tipo de documento: Article País de afiliação: Austrália
Texto completo
Imprimir
XML
PubMed Links
Buscar no Google

Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Assunto principal: COVID-19 Limite: Humans País/Região como assunto: Oceania Idioma: En Revista: BMC Res Notes Ano de publicação: 2021 Tipo de documento: Article País de afiliação: Austrália