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Automatic segmentation of esophageal gross tumor volume in 18F-FDG PET/CT images via GloD-LoATUNet.
Yue, Yaoting; Li, Nan; Zhang, Gaobo; Zhu, Zhibin; Liu, Xin; Song, Shaoli; Ta, Dean.
Afiliação
  • Yue Y; Center for Biomedical Engineering, School of Information Science and Technology, Fudan University, Shanghai 200438, China; Human Phenome Institute, Fudan University, Shanghai 201203, China.
  • Li N; Department of Nuclear Medicine, Fudan University Shanghai Cancer Center, Shanghai 201321, China.
  • Zhang G; Center for Biomedical Engineering, School of Information Science and Technology, Fudan University, Shanghai 200438, China.
  • Zhu Z; School of Physics and Electromechanical Engineering, Hexi University, Zhangye 734000, Gansu, China. Electronic address: rifnyga@163.com.
  • Liu X; Academy for Engineering and Technology, Fudan University, Shanghai 200433, China.
  • Song S; Department of Nuclear Medicine, Fudan University Shanghai Cancer Center, Shanghai 201321, China. Electronic address: shaoli-song@163.com.
  • Ta D; Center for Biomedical Engineering, School of Information Science and Technology, Fudan University, Shanghai 200438, China; Academy for Engineering and Technology, Fudan University, Shanghai 200433, China. Electronic address: tda@fudan.edu.cn.
Comput Methods Programs Biomed ; 229: 107266, 2023 Feb.
Article em En | MEDLINE | ID: mdl-36470035
ABSTRACT
BACKGROUND AND

OBJECTIVE:

For esophageal squamous cell carcinoma, radiotherapy is one of the primary treatments. During the planning before radiotherapy, the intractable task is to precisely delineate the esophageal gross tumor volume (GTV) on medical images. In current clinical practice, the manual delineation suffers from high intra- and inter-rater variability, while also exhausting the oncologists on a treadmill. There is an urgent demand for effective computer-aided automatic segmentation methods. To this end, we designed a novel deep network, dubbed as GloD-LoATUNet.

METHODS:

GloD-LoATUNet follows the effective U-shape structure. On the contractile path, the global deformable dense attention transformer (GloDAT), local attention transformer (LoAT), and convolution blocks are integrated to model long-range dependencies and localized information. On the center bridge and the expanding path, convolution blocks are adopted to upsample the extracted representations for pixel-wise semantic prediction. Between the peer-to-peer counterparts, enhanced skip connections are built to compensate for the lost spatial information and dependencies. By exploiting complementary strengths of the GloDAT, LoAT, and convolution, GloD-LoATUNet has remarkable representation learning capabilities, performing well in the prediction of the small and variable esophageal GTV.

RESULTS:

The proposed approach was validated in the clinical positron emission tomography/computed tomography (PET/CT) cohort. For 4 different data partitions, we report the Dice similarity coefficient (DSC), Hausdorff distance (HD), and Mean surface distance (MSD) as 0.83±0.13, 4.88±9.16 mm, and 1.40±4.11 mm; 0.84±0.12, 6.89±12.04 mm, and 1.18±3.02 mm; 0.84±0.13, 3.89±7.64 mm, and 1.28±3.68 mm; 0.86±0.09, 3.71±4.79 mm, and 0.90±0.37 mm; respectively. The predicted contours present a desirable consistency with the ground truth.

CONCLUSIONS:

The inspiring results confirm the accuracy and generalizability of the proposed model, demonstrating the potential for automatic segmentation of esophageal GTV in clinical practice.
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Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Assunto principal: Neoplasias Esofágicas / Carcinoma de Células Escamosas do Esôfago Tipo de estudo: Guideline / Prognostic_studies Limite: Humans Idioma: En Revista: Comput Methods Programs Biomed Assunto da revista: INFORMATICA MEDICA Ano de publicação: 2023 Tipo de documento: Article País de afiliação: China

Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Assunto principal: Neoplasias Esofágicas / Carcinoma de Células Escamosas do Esôfago Tipo de estudo: Guideline / Prognostic_studies Limite: Humans Idioma: En Revista: Comput Methods Programs Biomed Assunto da revista: INFORMATICA MEDICA Ano de publicação: 2023 Tipo de documento: Article País de afiliação: China