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Unified Topological Inference for Brain Networks in Temporal Lobe Epilepsy Using the Wasserstein Distance.
Chung, Moo K; Ramos, Camille Garcia; De Paiva, Felipe Branco; Mathis, Jedidiah; Prabharakaren, Vivek; Nair, Veena A; Meyerand, Elizabeth; Hermann, Bruce P; Binder, Jeffrey R; Struck, Aaron F.
Afiliação
  • Chung MK; Department of Biostatistics and Medical Informatics, University of Wisconsin-Madison, USA.
  • Ramos CG; Department of Neurology, University of Wisconsin-Madison, USA.
  • De Paiva FB; Department of Neurology, University of Wisconsin-Madison, USA.
  • Mathis J; Department of Neurology, Medical College of Wisconsin, USA.
  • Prabharakaren V; Department of Radiology, University of Wisconsin-Madison, USA.
  • Nair VA; Department of Radiology, University of Wisconsin-Madison, USA.
  • Meyerand E; Departments of Medical Physics & Biomedical Engineering, University of Wisconsin-Madison, USA.
  • Hermann BP; Department of Neurology, University of Wisconsin-Madison, USA.
  • Binder JR; Department of Neurology, Medical College of Wisconsin, USA.
  • Struck AF; Department of Neurology, University of Wisconsin-Madison, USA.
ArXiv ; 2023 Sep 20.
Article em En | MEDLINE | ID: mdl-36824424
ABSTRACT
Persistent homology offers a powerful tool for extracting hidden topological signals from brain networks. It captures the evolution of topological structures across multiple scales, known as filtrations, thereby revealing topological features that persist over these scales. These features are summarized in persistence diagrams, and their dissimilarity is quantified using the Wasserstein distance. However, the Wasserstein distance does not follow a known distribution, posing challenges for the application of existing parametric statistical models. To tackle this issue, we introduce a unified topological inference framework centered on the Wasserstein distance. Our approach has no explicit model and distributional assumptions. The inference is performed in a completely data driven fashion. We apply this method to resting-state functional magnetic resonance images (rs-fMRI) of temporal lobe epilepsy patients collected from two different sites the University of Wisconsin-Madison and the Medical College of Wisconsin. Importantly, our topological method is robust to variations due to sex and image acquisition, obviating the need to account for these variables as nuisance covariates. We successfully localize the brain regions that contribute the most to topological differences. A MATLAB package used for all analyses in this study is available at https//github.com/laplcebeltrami/PH-STAT.

Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Tipo de estudo: Prognostic_studies Idioma: En Revista: ArXiv Ano de publicação: 2023 Tipo de documento: Article País de afiliação: Estados Unidos

Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Tipo de estudo: Prognostic_studies Idioma: En Revista: ArXiv Ano de publicação: 2023 Tipo de documento: Article País de afiliação: Estados Unidos