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1.

Graded mesoderm assembly governs cell fate and morphogenesis of the early mammalian heart.

Dominguez, Martin H; Krup, Alexis Leigh; Muncie, Jonathon M; Bruneau, Benoit G.

Cell ; 186(3): 479-496.e23, 2023 02 02.

Artículo en Inglés | MEDLINE | ID: mdl-36736300

2.

Transcription factor protein interactomes reveal genetic determinants in heart disease.

Gonzalez-Teran, Barbara; Pittman, Maureen; Felix, Franco; Thomas, Reuben; Richmond-Buccola, Desmond; Hüttenhain, Ruth; Choudhary, Krishna; Moroni, Elisabetta; Costa, Mauro W; Huang, Yu; Padmanabhan, Arun; Alexanian, Michael; Lee, Clara Youngna; Maven, Bonnie E J; Samse-Knapp, Kaitlen; Morton, Sarah U; McGregor, Michael; Gifford, Casey A; Seidman, J G; Seidman, Christine E; Gelb, Bruce D; Colombo, Giorgio; Conklin, Bruce R; Black, Brian L; Bruneau, Benoit G; Krogan, Nevan J; Pollard, Katherine S; Srivastava, Deepak.

Cell ; 185(5): 794-814.e30, 2022 03 03.

Artículo en Inglés | MEDLINE | ID: mdl-35182466

3.

Identifying cis Elements for Spatiotemporal Control of Mammalian DNA Replication.

Sima, Jiao; Chakraborty, Abhijit; Dileep, Vishnu; Michalski, Marco; Klein, Kyle N; Holcomb, Nicolas P; Turner, Jesse L; Paulsen, Michelle T; Rivera-Mulia, Juan Carlos; Trevilla-Garcia, Claudia; Bartlett, Daniel A; Zhao, Peiyao A; Washburn, Brian K; Nora, Elphège P; Kraft, Katerina; Mundlos, Stefan; Bruneau, Benoit G; Ljungman, Mats; Fraser, Peter; Ay, Ferhat; Gilbert, David M.

Cell ; 176(4): 816-830.e18, 2019 02 07.

Artículo en Inglés | MEDLINE | ID: mdl-30595451

4.

Chromatin Domains Go on Repeat in Disease.

Bruneau, Benoit G; Nora, Elphège P.

Cell ; 175(1): 38-40, 2018 09 20.

Artículo en Inglés | MEDLINE | ID: mdl-30241613

5.

Transcriptional profiling and therapeutic targeting of oxidative stress in neuroinflammation.

Mendiola, Andrew S; Ryu, Jae Kyu; Bardehle, Sophia; Meyer-Franke, Anke; Ang, Kenny Kean-Hooi; Wilson, Chris; Baeten, Kim M; Hanspers, Kristina; Merlini, Mario; Thomas, Sean; Petersen, Mark A; Williams, Alexander; Thomas, Reuben; Rafalski, Victoria A; Meza-Acevedo, Rosa; Tognatta, Reshmi; Yan, Zhaoqi; Pfaff, Samuel J; Machado, Michael R; Bedard, Catherine; Rios Coronado, Pamela E; Jiang, Xiqian; Wang, Jin; Pleiss, Michael A; Green, Ari J; Zamvil, Scott S; Pico, Alexander R; Bruneau, Benoit G; Arkin, Michelle R; Akassoglou, Katerina.

Nat Immunol ; 21(5): 513-524, 2020 05.

Artículo en Inglés | MEDLINE | ID: mdl-32284594

6.

Author Correction: Transcriptional profiling and therapeutic targeting of oxidative stress in neuroinflammation.

Mendiola, Andrew S; Ryu, Jae Kyu; Bardehle, Sophia; Meyer-Franke, Anke; Ang, Kenny Kean-Hooi; Wilson, Chris; Baeten, Kim M; Hanspers, Kristina; Merlini, Mario; Thomas, Sean; Petersen, Mark A; Williams, Alexander; Thomas, Reuben; Rafalski, Victoria A; Meza-Acevedo, Rosa; Tognatta, Reshmi; Yan, Zhaoqi; Pfaff, Samuel J; Machado, Michael R; Bedard, Catherine; Coronado, Pamela E Rios; Jiang, Xiqian; Wang, Jin; Pleiss, Michael A; Green, Ari J; Zamvil, Scott S; Pico, Alexander R; Bruneau, Benoit G; Arkin, Michelle R; Akassoglou, Katerina.

Nat Immunol ; 21(9): 1135, 2020 Sep.

Artículo en Inglés | MEDLINE | ID: mdl-32661365

7.

Targeted Degradation of CTCF Decouples Local Insulation of Chromosome Domains from Genomic Compartmentalization.

Nora, Elphège P; Goloborodko, Anton; Valton, Anne-Laure; Gibcus, Johan H; Uebersohn, Alec; Abdennur, Nezar; Dekker, Job; Mirny, Leonid A; Bruneau, Benoit G.

Cell ; 169(5): 930-944.e22, 2017 May 18.

Artículo en Inglés | MEDLINE | ID: mdl-28525758

8.

Complex Interdependence Regulates Heterotypic Transcription Factor Distribution and Coordinates Cardiogenesis.

Luna-Zurita, Luis; Stirnimann, Christian U; Glatt, Sebastian; Kaynak, Bogac L; Thomas, Sean; Baudin, Florence; Samee, Md Abul Hassan; He, Daniel; Small, Eric M; Mileikovsky, Maria; Nagy, Andras; Holloway, Alisha K; Pollard, Katherine S; Müller, Christoph W; Bruneau, Benoit G.

Cell ; 164(5): 999-1014, 2016 Feb 25.

Artículo en Inglés | MEDLINE | ID: mdl-26875865

9.

Spatial and temporal organization of the genome: Current state and future aims of the 4D nucleome project.

Dekker, Job; Alber, Frank; Aufmkolk, Sarah; Beliveau, Brian J; Bruneau, Benoit G; Belmont, Andrew S; Bintu, Lacramioara; Boettiger, Alistair; Calandrelli, Riccardo; Disteche, Christine M; Gilbert, David M; Gregor, Thomas; Hansen, Anders S; Huang, Bo; Huangfu, Danwei; Kalhor, Reza; Leslie, Christina S; Li, Wenbo; Li, Yun; Ma, Jian; Noble, William S; Park, Peter J; Phillips-Cremins, Jennifer E; Pollard, Katherine S; Rafelski, Susanne M; Ren, Bing; Ruan, Yijun; Shav-Tal, Yaron; Shen, Yin; Shendure, Jay; Shu, Xiaokun; Strambio-De-Castillia, Caterina; Vertii, Anastassiia; Zhang, Huaiying; Zhong, Sheng.

Mol Cell ; 83(15): 2624-2640, 2023 08 03.

Artículo en Inglés | MEDLINE | ID: mdl-37419111

10.

Human disease modeling reveals integrated transcriptional and epigenetic mechanisms of NOTCH1 haploinsufficiency.

Theodoris, Christina V; Li, Molong; White, Mark P; Liu, Lei; He, Daniel; Pollard, Katherine S; Bruneau, Benoit G; Srivastava, Deepak.

Cell ; 160(6): 1072-86, 2015 Mar 12.

Artículo en Inglés | MEDLINE | ID: mdl-25768904

11.

Modeling congenital heart disease: lessons from mice, hPSC-based models, and organoids.

Rao, Kavitha S; Kameswaran, Vasumathi; Bruneau, Benoit G.

Genes Dev ; 36(11-12): 652-663, 2022 06 01.

Artículo en Inglés | MEDLINE | ID: mdl-35835508

12.

Dissecting CTCF site function in a tense HoxD locus.

Bruneau, Benoit G.

Genes Dev ; 35(21-22): 1401-1402, 2021 11 01.

Artículo en Inglés | MEDLINE | ID: mdl-34725128

13.

Brahma safeguards canalization of cardiac mesoderm differentiation.

Hota, Swetansu K; Rao, Kavitha S; Blair, Andrew P; Khalilimeybodi, Ali; Hu, Kevin M; Thomas, Reuben; So, Kevin; Kameswaran, Vasumathi; Xu, Jiewei; Polacco, Benjamin J; Desai, Ravi V; Chatterjee, Nilanjana; Hsu, Austin; Muncie, Jonathon M; Blotnick, Aaron M; Winchester, Sarah A B; Weinberger, Leor S; Hüttenhain, Ruth; Kathiriya, Irfan S; Krogan, Nevan J; Saucerman, Jeffrey J; Bruneau, Benoit G.

Nature ; 602(7895): 129-134, 2022 02.

Artículo en Inglés | MEDLINE | ID: mdl-35082446

14.

TBXT dose sensitivity and the decoupling of nascent mesoderm specification from EMT progression in 2D human gastruloids.

Bulger, Emily A; Muncie-Vasic, Ivana; Libby, Ashley R G; McDevitt, Todd C; Bruneau, Benoit G.

Development ; 151(6)2024 Mar 15.

Artículo en Inglés | MEDLINE | ID: mdl-38411343

15.

Dynamic and coordinated epigenetic regulation of developmental transitions in the cardiac lineage.

Wamstad, Joseph A; Alexander, Jeffrey M; Truty, Rebecca M; Shrikumar, Avanti; Li, Fugen; Eilertson, Kirsten E; Ding, Huiming; Wylie, John N; Pico, Alexander R; Capra, John A; Erwin, Genevieve; Kattman, Steven J; Keller, Gordon M; Srivastava, Deepak; Levine, Stuart S; Pollard, Katherine S; Holloway, Alisha K; Boyer, Laurie A; Bruneau, Benoit G.

Cell ; 151(1): 206-20, 2012 Sep 28.

Artículo en Inglés | MEDLINE | ID: mdl-22981692

16.

RNA Interactions Are Essential for CTCF-Mediated Genome Organization.

Saldaña-Meyer, Ricardo; Rodriguez-Hernaez, Javier; Escobar, Thelma; Nishana, Mayilaadumveettil; Jácome-López, Karina; Nora, Elphege P; Bruneau, Benoit G; Tsirigos, Aristotelis; Furlan-Magaril, Mayra; Skok, Jane; Reinberg, Danny.

Mol Cell ; 76(3): 412-422.e5, 2019 11 07.

Artículo en Inglés | MEDLINE | ID: mdl-31522988

17.

A Mesp1-dependent developmental breakpoint in transcriptional and epigenomic specification of early cardiac precursors.

Krup, Alexis Leigh; Winchester, Sarah A B; Ranade, Sanjeev S; Agrawal, Ayushi; Devine, W Patrick; Sinha, Tanvi; Choudhary, Krishna; Dominguez, Martin H; Thomas, Reuben; Black, Brian L; Srivastava, Deepak; Bruneau, Benoit G.

Development ; 150(9)2023 05 01.

Artículo en Inglés | MEDLINE | ID: mdl-36994838

18.

Direct reprogramming of fibroblasts into functional cardiomyocytes by defined factors.

Ieda, Masaki; Fu, Ji-Dong; Delgado-Olguin, Paul; Vedantham, Vasanth; Hayashi, Yohei; Bruneau, Benoit G; Srivastava, Deepak.

Cell ; 142(3): 375-86, 2010 Aug 06.

Artículo en Inglés | MEDLINE | ID: mdl-20691899

19.

Transcription Factor GATA4 Regulates Cell Type-Specific Splicing Through Direct Interaction With RNA in Human Induced Pluripotent Stem Cell-Derived Cardiac Progenitors.

Zhu, Lili; Choudhary, Krishna; Gonzalez-Teran, Barbara; Ang, Yen-Sin; Thomas, Reuben; Stone, Nicole R; Liu, Lei; Zhou, Ping; Zhu, Chenchen; Ruan, Hongmei; Huang, Yu; Jin, Shibo; Pelonero, Angelo; Koback, Frances; Padmanabhan, Arun; Sadagopan, Nandhini; Hsu, Austin; Costa, Mauro W; Gifford, Casey A; van Bemmel, Joke G; Hüttenhain, Ruth; Vedantham, Vasanth; Conklin, Bruce R; Black, Brian L; Bruneau, Benoit G; Steinmetz, Lars; Krogan, Nevan J; Pollard, Katherine S; Srivastava, Deepak.

Circulation ; 146(10): 770-787, 2022 09 06.

Artículo en Inglés | MEDLINE | ID: mdl-35938400

20.

The developing heart: from The Wizard of Oz to congenital heart disease.