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1.
Molecules ; 28(15)2023 Aug 01.
Artículo en Inglés | MEDLINE | ID: mdl-37570779

RESUMEN

In this work, the structural, electronic, and optical stability properties of the chitosan monomer (M-Ch) and atomic silver complex are reported, as well as a unitary cell of a silver cluster in the gas phase and acetic acid. The generalized gradient approximation HSEh1PBE/def2-TZVPP50 results established the structures' anionic charge (Q = -1|e|) and the doublet state (M = 2). The high cohesive energy indicates structural stability, and the quantum-mechanical descriptors show a high polarity and low chemical reactivity. Also, the quantum-mechanical descriptors present a low work function that shows the structures are suitable for applications in light-emitting diodes. Finally, the electronic behavior observed by the |HOMO-LUMO| gap energy changes depending on the atomic silver incorporated into the complex.

2.
Chemphyschem ; 23(24): e202200310, 2022 12 16.
Artículo en Inglés | MEDLINE | ID: mdl-35945140

RESUMEN

The interaction of α-glucose with a BN-nanosheet, BN-nanotube, and BN-fullerene, was analyzed from an atomistic and electronic point of view, to evaluate such nanostructures as possible carriers and/or biosensors of the α-glucose molecule. Adsorption energies are in the range of physisorption (-0.79 eV to -0.91 eV) for the BN-nanosheet and -nanotube, and chemisorption (-2.24 eV to -2.35 eV), for the BN-fullerene. All systems, exhibit semiconductor-like behavior and great stability according to |LUMO-HOMO| energy gap [GapLH ] and chemical potential values, respectively. For the BN-nanosheet and -nanotube, the stabilization of the complexes is through hydrogen bonds, while for BN-fullerene is through a covalent bond and charge transfer. Furthermore, the BN-fullerene is able to dissociate the α-glucose molecule, which could help to decomposer such a compound, and be used for biological applications. The data taking into consideration solvent effects have no significant impact with respect to gas phase, except in the dipole moment (Md ) where we noticed an increase up to ∼45 %. Our results suggest that BN-nanosheet and -nanotube, may act as biosensors, while BN-fullerene, may serve as a carrier or degrader of the α-glucose molecule.


Asunto(s)
Técnicas Biosensibles , Fulerenos , Nanoestructuras , Boro , Fulerenos/química , Glucosa , Nanoestructuras/química , Electrónica
3.
ACS Omega ; 7(47): 42975-42993, 2022 Nov 29.
Artículo en Inglés | MEDLINE | ID: mdl-36467960

RESUMEN

The present work deals with the corrosion inhibition mechanism of API 5L X52 steel in 1 M H2SO4 employing the ionic liquid (IL) decyl(dimethyl)sulfonium iodide [DDMS+I-]. Such a mechanism was elicited by the polarization resistance (R p), potentiodynamic polarization (PDP), and electrochemical impedance spectroscopy (EIS) techniques, both in stationary and dynamic states. The electrochemical results indicated that the corrosion inhibition was controlled by a charge transfer process and that the IL behaved as a mixed-type corrosion inhibitor (CI) with anodic preference. The experimental results revealed maximal inhibition efficiency (IE) rates up to 93% at 150 ppm in the stationary state, whereas in turbulent flow, the IE fell to 65% due to the formation of microvortexes that promoted higher desorption of IL molecules from the surface. The Gibbs free energy of adsorption (ΔG°ads) value of -34.89 kJ mol-1, obtained through the Langmuir isotherm, indicated the formation of an IL monolayer on the metal surface by combining physisorption and chemisorption. The surface analysis techniques confirmed the presence of Fe x O y , FeOOH, and IL on the surface and showed that corrosion damage diminished in the presence of IL. Furthermore, the quantum chemistry calculations (DFT) indicated that the iodide anion hosted most of the highest occupied molecular orbital (HOMO), which eased its adsorption on the anodic sites, preventing the deposition of sulfate ions on the electrode surface.

4.
J Mol Model ; 26(11): 321, 2020 Oct 28.
Artículo en Inglés | MEDLINE | ID: mdl-33113023

RESUMEN

The single-electron transfer (SET) reactions from the neutral and mono-anion species of five imidazole alkaloids (lepidines A, B, C, D, and E) against hydroperoxyl radicals have been studied using the density functional theory and the Marcus theory. The deprotonated species of three alkaloids were found to have free radical scavenging activity. The antioxidant activity was studied via single-electron transfer (SET) under physiological conditions. The SET reactions for lepidines B, D, and E were found to have rate constants ranging from 105 to 106 M-1 s-1. Therefore, they are predicted to be able to deactivate hydroperoxyl radicals and therefore the damage caused by them to polyunsaturated fatty acids. It is important to mention that the acid-base equilibrium plays an important role in their free radical scavenging activity. Graphical abstract Lepidines are predicted to be able to deactivate hydroperoxyl radicals and the damage caused by them to polyunsaturated fatty acids.


Asunto(s)
Alcaloides/farmacología , Antioxidantes/farmacología , Electrones , Imidazoles/farmacología , Alcaloides/química , Antioxidantes/química , Imidazoles/química , Conformación Molecular , Termodinámica
5.
Sci Rep ; 9(1): 16521, 2019 11 11.
Artículo en Inglés | MEDLINE | ID: mdl-31712591

RESUMEN

The effect of chemical order in the structural and physicochemical properties of B12N12 [4,6]-fullerene (BNF) isomers was evaluated using density functional theory and molecular dynamic calculations. The feasibility to find stable BNF isomers with atomic arrangement other than the well-known octahedral Th-symmetry was explored. In this study, the number of homonuclear bonds in the modeled nanostructures was used as categorical parameter to describe and quantify the degree of structural order. The BNF without homonuclear bonds was identified as the most energetically favorable isomer. However, a variety of BNF arrays departing from Th-symmetry was determined as stable structures also. The calculated vibrational spectra suggest that isomers with chemical disorder can be identified by infrared spectroscopy. In general, formation of homonuclear bonds is possible meanwhile the entropy of the system increases, but at expense of cohesive energy. It is proposed that formation of phase-segregated regions stablishes an apparent limit to the number of homonuclear bonds in stable B12N12 fullerenes. It was found that formation of homonuclear bonds decreases substantially the chemical hardness of BNF isomers and generates zones with large charge density, which might act as reactive sites. Moreover, chemical disorder endows BNF isomers with a permanent electric dipole moment as large as 3.28 D. The obtained results suggest that by manipulating their chemical order, the interaction of BNF's with other molecular entities can be controlled, making them potential candidates for drug delivery, catalysis and sensing.

6.
J Mol Model ; 19(6): 2335-41, 2013 Jun.
Artículo en Inglés | MEDLINE | ID: mdl-23397070

RESUMEN

We perform density functional theory studies to investigate structural and electronic properties of the (5,5) boron nitride nanotubes (BNNTs) with surfaces and ends functionalized by thiol (SH) and hydroxyl (OH) groups. The exchange-correlation energies are treated according to the functional of Hamprecht-Cohen-Tozer-Handy within the generalized gradient approximation (HCTH-GGA). We use the base function with double polarization DNP. To determine the (5,5) BNNT-SH and (5,5) BNNT-OH relaxed structures the minimum energy criterion is applied considering six different geometries depending upon the SH and OH functional groups orientation: (C1) The adsorbed functional group is oriented toward the N atom, (C2) the functional group is oriented toward the B atom, (C3) the functional group is at the central hexagon of the BNNT surface. The (C4) fourth and (C5) fifth configurations are formed by allowing bonds (of S or O) with B or N atoms at one end of the nanotube. (C6) The sixth geometry is obtained by placing the functional group at the center of one end of the BNNT. The (5,5) BNNT-SH system, in vacuum, suffers a semiconductor to metal transition while the (5,5) BNNT-OH system retains the semiconductor behavior. When structures are solvated in water these systems behave as semiconductors. The polarity increases as a consequence of the functional group-nanotube interactions no matter if they are in vacuum or in solvation situation, which indicates the possible solubility and dispersion. According to the work function the best option to construct a device is with the BNNT-OH system.


Asunto(s)
Compuestos de Boro/química , Modelos Químicos , Nanotubos/química , Simulación por Computador , Electrónica , Modelos Moleculares , Conformación Molecular
7.
J Mol Graph Model ; 42: 115-9, 2013 May.
Artículo en Inglés | MEDLINE | ID: mdl-23631870

RESUMEN

Using the density functional theory (DFT) we study the structural and electronic properties of functionalized (5,5) chirality single wall beryllium oxide nanotubes (SW-BeONTs), i.e. armchair nanotubes. The nanotube surface and ends are functionalized by the hydroxyl (OH) functional group. Our calculations consider the Hamprecht-Cohen-Tozer-Handy functional in the generalized gradient approximation (HCTH-GGA) to deal with the exchange-correlation energies, and the base function with double polarization (DNP). The geometry optimization of both defects free and with point defects nanotubes is done applying the criterion of minimum energy. Six configurations are considered: The OH oriented toward the Be (on the surface and at the end), toward the O (on the surface and at the end) and placed at the nanotube ends. Simulation results show that the nanotube functionalization takes place at the nanotube ends with the BeO bond displaying hydrogen-like bridge bonds. Moreover the nanotube semiconductor behavior remains unchanged. The polarity is high (it shows a transition from covalent to ionic) favoring solvatation. On the other hand, the work function low value suggests this to be a good candidate for the device fabrication. When the nanotube contains surface point defects the work function is reduced which provides excellent possibilities for the use of this material in the electronic industry.


Asunto(s)
Berilio/química , Nanopartículas del Metal/química , Nanotubos/química , Simulación por Computador , Radical Hidroxilo , Modelos Químicos , Modelos Moleculares , Nanotecnología/métodos , Semiconductores , Propiedades de Superficie
8.
J Mol Model ; 19(2): 839-46, 2013 Feb.
Artículo en Inglés | MEDLINE | ID: mdl-23065142

RESUMEN

The influence of vacancies and substitutional defects on the structural and electronic properties of graphene, graphene oxide, hexagonal boron nitride, and boron nitride oxide two-dimensional molecular models was studied using density functional theory (DFT) at the level of local density approximation (LDA). Bond length, dipole moment, HOMO-LUMO energy gap, and binding energy were calculated for each system with and without point defects. The results obtained indicate that the formation of a point defect does not necessary lead to structural instability; nevertheless, surface distortions and reconstruction processes were observed, mainly when a vacancy-type defect is generated. For graphene, it was found that incorporation of a point defect results in a semiconductor-semimetal transition and also increases notably its polar character. As with graphene, the formation of a point defect in a hexagonal boron nitride sheet reduces its energy gap, although its influence on the resulting dipole moment is not as dramatic as in graphene. The influence of point defects on the structural and electronic properties of graphene oxide and boron nitride oxide sheets were found to be mediated by the chemisorbed species.

9.
J Mol Model ; 18(5): 2147-52, 2012 May.
Artículo en Inglés | MEDLINE | ID: mdl-21947417

RESUMEN

Using first-principles total energy calculations within the density functional theory (DFT), we investigated the electronic and structural properties of graphene-like silicon sheets. Our studies were performed using the LSDA (PWC) and GGS (PBE) approaches. Two configurations were explored: one corresponding to a defect-free layer (h-Si), and the other to a layer with defects (d-Si), both of which were in the armchair geometry. These sheets contained clusters of the C(n)H(m) type. We also investigated the effects of doping with group IV-A elements. Structural stability was studied by only considering positive vibration frequencies. Results showed that both h-Si and d-Si present a corrugated structure with concavity. h-Si sheets were found to be ionic (D.M. = 0.33 Debye) with an energy gap (HOMO-LUMO) of 0.77 eV in the LSDA theory and 0.76 eV in the GGS approach, while d-Si sheets were observed to be covalent (D.M. = 2.78 D), and exhibited semimetallic electronic behavior (HOMO-LUMO gap = 0.32 eV within the LSDA theory and 0.33 eV within the GGS approach). d-Si sheets doped with one carbon or one germanium preserved the polarity of the undoped d-Si sheets, as well as their semimetallic electronic behavior. However, when the sheets were doped with two C or two Ge atoms, or with one of each atom (to give Si(52)CGeH(18)), they retained the semimetallic behavior, but they changed from having ionic character to covalent character.


Asunto(s)
Electrones , Grafito/química , Nanoestructuras/química , Silicio/química , Electrónica , Teoría Cuántica , Termodinámica , Vibración
10.
J Mol Model ; 17(5): 1133-9, 2011 May.
Artículo en Inglés | MEDLINE | ID: mdl-20680365

RESUMEN

The electrical and chemical properties of graphene (C(24)H(12)), graphane (C(24)H(24)) and graphene oxide (C(54)H(17)+O+(OH)(3)+COOH) were studied through the density functional theory (DFT) at level of Local Density Approximation (LDA) using a model C(n)H(m) like. The optimized geometry, energy gap and chemical reactivity for the proposed carbon 2D models are reported. It was found that while the graphene and graphane structures have semiconductor behavior, the graphene oxide behaves as semi-metal. However, a transition from semi-mental to semiconductor is predicted if the carboxyl group (COOH) is removed from such structure. The chemically active sites are analyzed on the basis of the electrophilic Fukui functions for each structure.


Asunto(s)
Conductividad Eléctrica , Grafito/química , Óxidos/química , Electrones , Modelos Químicos , Teoría Cuántica , Semiconductores
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