SR45a plays a key role in enhancing cotton resistance to Verticillium dahliae by alternative splicing of immunity genes.

Alternative splicing (AS) of pre-mRNAs increases the diversity of transcriptome and proteome and plays fundamental roles in plant development and stress responses. However, the prevalent changes in AS events and the regulating mechanisms of plants in response to pathogens remain largely unknown. Here, we show that AS changes are an important mechanism conferring cotton immunity to Verticillium dahliae (Vd). GauSR45a, encoding a serine/arginine-rich RNA binding protein, was upregulated expression and underwent AS in response to Vd infection in Gossypium australe, a wild diploid cotton species highly resistant to Vd. Silencing GauSR45a substantially reduced the splicing ratio of Vd-induced immune-associated genes, including GauBAK1 (BRI1-associated kinase 1) and GauCERK1 (chitin elicitor receptor kinase 1). GauSR45a binds to the GAAGA motif that is commonly found in the pre-mRNA of genes essential for PTI, ETI, and defense. The binding between GauSR45a and the GAAGA motif in the pre-mRNA of BAK1 was enhanced by two splicing factors of GauU2AF35B and GauU1-70 K, thereby facilitating exon splicing; silencing either AtU2AF35B or AtU1-70 K decreased the resistance to Vd in transgenic GauSR45a Arabidopsis. Overexpressing the short splicing variant of BAK1GauBAK1.1 resulted in enhanced Verticillium wilt resistance rather than the long one GauBAK1.2. Vd-induced far more AS events were in G. barbadense (resistant tetraploid cotton) than those in G. hirsutum (susceptible tetraploid cotton) during Vd infection, indicating resistance divergence in immune responses at a genome-wide scale. We provided evidence showing a fundamental mechanism by which GauSR45a enhances cotton resistance to Vd through global regulation of AS of immunity genes.

General Regulatory Factor7 regulates innate immune signalling to enhance Verticillium wilt resistance in cotton.

Sessile growing plants are always vulnerable to microbial pathogen attacks throughout their lives. To fend off pathogen invasion, plants have evolved a sophisticated innate immune system that consists of cell surface receptors and intracellular receptors. Somatic embryogenesis receptor kinases (SERKs) belong to a small group of leucine-rich repeat receptor-like kinases (LRR-RLKs) that function as co-receptors regulating diverse physiological processes. GENRAL REGULATORY FACTOR (GRF) proteins play an important role in physiological signalling transduction. However, the function of GRF proteins in plant innate immune signalling remains elusive. Here, we identified a GRF gene, GauGRF7, that is expressed both constitutively and in response to fungal pathogen infection. Intriguingly, silencing of GRF7 compromised plant innate immunity, resulting in susceptibility to Verticillium dahliae infection. Both transgenic GauGRF7 cotton and transgenic GauGRF7 Arabidopsis lines enhanced the innate immune response to V. dahliae infection, leading to high expression of two helper NLRs (hNLR) genes (ADR1 and NRG1) and pathogenesis-related genes, and increased ROS production and salicylic acid level. Moreover, GauGRF7 interacted with GhSERK1, which positively regulated GRF7-mediated innate immune response in cotton and Arabidopsis. Our findings revealed the molecular mechanism of the GRF protein in plant immune signaling and offer potential opportunities for improving plant resistance to V. dahliae infection.

RVE2, a new regulatory factor in jasmonic acid pathway, orchestrates resistance to Verticillium wilt.

Verticillium dahliae, one of the most destructive fungal pathogens of several crops, challenges the sustainability of cotton productivity worldwide because very few widely-cultivated Upland cotton varieties are resistant to Verticillium wilt (VW). Here, we report that REVEILLE2 (RVE2), the Myb-like transcription factor, confers the novel function in resistance to VW by regulating the jasmonic acid (JA) pathway in cotton. RVE2 expression was essentially required for the activation of JA-mediated disease-resistance response. RVE2 physically interacted with TPL/TPRs and disturbed JAZ proteins to recruit TPL and TPR1 in NINJA-dependent manner, which regulated JA response by relieving inhibited-MYC2 activity. The MYC2 then bound to RVE2 promoter for the activation of its transcription, forming feedback loop. Interestingly, a unique truncated RVE2 widely existing in D-subgenome (GhRVE2D) of natural Upland cotton represses the ability of the MYC2 to activate GhRVE2A promoter but not GausRVE2 or GbRVE2. The result could partially explain why Gossypium barbadense popularly shows higher resistance than Gossypium hirsutum. Furthermore, disturbing the JA-signalling pathway resulted into the loss of RVE2-mediated disease-resistance in various plants (Arabidopsis, tobacco and cotton). RVE2 overexpression significantly enhanced the resistance to VW. Collectively, we conclude that RVE2, a new regulatory factor, plays a pivotal role in fine-tuning JA-signalling, which would improve our understanding the mechanisms underlying the resistance to VW.

ATP-citrate lyase B (ACLB) negatively affects cell death and resistance to Verticillium wilt.

BACKGROUND: ATP-citrate lyase (ACL) plays a pivotal role in histone acetylation and aerobic glycolysis. In plant, ACL is a heteromeric enzyme composed of ACLA (45 kD) and ACLB (65 kD). So far, the function of ACL genes in cotton still remains unknown. RESULTS: Here, we identified three ACLA homologous sequences and two ACLB homologous in each genome/sub-genome of cotton species. Silencing ACLB in cotton led to cell death at newly-grown leaves and stem apexes. Simultaneously, in ACLB-silenced plants, transcription factors related to senescence including SGR, WRKY23 and Osl57 were observed to be activated. Further investigation showed that excessive H2O2 was accumulated, salicylic acid-dependent defense response and pathogenesis-related gene expressions were evidently enhanced in ACLB-silenced plants, implying that knockdown of ACLB genes leads to hypersensitive response-like cell death in cotton seedlings. However, as noted, serious cell death happened in newly-grown leaves and stem apexes in ACLB-silenced plants, which led to the failure of subsequent fungal pathogenicity assays. To confirm the role of ACLB gene in regulating plant immune response, the dicotyledonous model plant Arabidopsis was selected for functional verification of ACLB gene. Our results indicate the resistance to Verticillium dahliae infection in the Arabidopsis mutant aclb-2 were enhanced without causing strong cell death. Ectopic expression of GausACLB-2 in Arabidopsis weakened its resistance to V. dahliae either in Col-0 or in aclb-2 background, in which the expression level of ACLB is negatively correlated with the resistance to V. dahliae. CONCLUSIONS: These results indicate that ACLB has a new function in negatively affecting the induction of plant defense response and cell death in cotton, which provides theoretical guidance for developing cotton varieties with resistance against Verticillium wilt.

Relationships of relative humidity with PM2.5 and PM10 in the Yangtze River Delta, China.

Severe particulate matter (PM, including PM2.5 and PM10) pollution frequently impacts many cities in the Yangtze River Delta (YRD) in China, which has aroused growing concern. In this study, we examined the associations between relative humidity (RH) and PM pollution using the equal step-size statistical method. Our results revealed that RH had an inverted U-shaped relationship with PM2.5 concentrations (peaking at RH = 45-70%), and an inverted V-shaped relationship (peaking at RH = 40 ± 5%) with PM10, SO2, and NO2. The trends of polluted-day number significantly changed at RH = 70%. The very-dry (RH < 45%), dry (RH = 45-60%) and low-humidity (RH = 60-70%) conditions positively affected PM2.5 and exerted an accumulation effect, while the mid-humidity (RH = 70-80%), high-humidity (RH = 80-90%), and extreme-humidity (RH = 90-100%) conditions played a significant role in reducing particle concentrations. For PM10, the accumulation and reduction effects of RH were split at RH = 45%. Moreover, an upward slope in the PM2.5/PM10 ratio indicated that the accumulation effects from increasing RH were more intense on PM2.5 than on PM10, while the opposite was noticed for the reduction effects. Secondary transformations from SO2 and NO2 to sulfate and nitrate were mainly responsible for PM2.5 pollution, and thus, controlling these precursors is effective in mitigating the PM pollution in the YRD, especially during winter. The conclusions in this study will be helpful for regional air-quality management.

HfO2/Al2O3 multilayer for RRAM arrays: a technique to improve tail-bit retention.

In this work, the HfO2/Al2O3 multilayer structure is applied for RRAM arrays. Compared to HfO2 RRAM, the data retention failure of tail bits is suppressed significantly, especially for the high resistance state (HRS). The retention of tail bits is studied in detail by temperature simulation and crystallization analysis. We attribute the improvement of tail-bit retention to the decreased oxygen ion diffusivity caused by the Al2O3 layer. Furthermore, the HfO2/Al2O3 multilayer structure exhibits higher crystallization temperature, thus leading to fewer grain boundaries around the filament during the operations. With fewer grain boundaries, oxygen ion diffusion is suppressed, leading to fewer tail bits and better retention.

Two PHOSPHATE-TRANSPORTER1 genes in cotton enhance tolerance to phosphorus starvation.

Phosphorus is an essential macronutrient element for productivity of crop ecosystems. But orthophosphate (Pi), the direct uptake form by plants, is found in low solubility in soil, leading to plants often suffer from Pi starvation when they grow. High-affinity Pi transporters (PTs) play roles in Pi starvation response (PSR), and they are the main Pi influx machinery. Like most sessile plants, cotton is also threatened by Pi deficiency and has developed sophisticated PSR systems to cope with phosphorus deficiency. However, the regulation mechanism of Pi homeostasis is largely unknown in cotton. Here, we identified that two cotton PHOSPHATE-TRANSPORTER1 family genes, GhPHT1;4 and GhPHT1;5, were mainly responsible for Pi uptake under Pi-starvation conditions in cotton. Their promoter activities were significantly activated by Pi deficiency and the overexpression of two genes enhanced the Pi uptake under Pi-deficiency and Pi-normal conditions. Furthermore, we found that PHT1;4 and PHT1;5 participated in modifying root architecture during Pi-starvation, as well as affecting the PSR in plant. Thus, we identified that two cotton Pi transporters functioned in Pi homeostasis, which would provide new gene resources for sustainable agriculture.

Temporal and Spatial Changes in the Material Exchange Function of Coastal Intertidal Wetland-A Case Study of Yancheng Intertidal Wetland.

As a transition zone between the terrestrial ecosystem and the marine ecosystem, coastal intertidal wetland provides an important place for material circulation and energy exchange, and it is nature's most precious resource. The ecological health of intertidal wetlands is an important prerequisite for sustainable green development. The material exchange function objectively and accurately reflects the material balance and ecological health of intertidal wetlands in the coastal zone. This paper uses remote sensing, geographic information technology, and model methods to objectively and accurately assess the temporal and spatial changes in the material exchange function of intertidal wetlands, providing a feasible method for studying the material exchange function of coastal wetlands. The material exchange capacity of wetlands in intertidal zones is affected by many factors, such as vegetation, topography, and base soil. After the invasion of the alien species Spartina alterniflora Lois., the elevation of the Suaeda salsa beach increased by 0.3 m. The elevation of the Phragmites australis beach rose by 0.14 m. The average elevation of S. alterniflora increased by 1.24 m. The material exchange capacity of the intertidal zone decreased by 25%. The functioning of the material exchange between sea and land changed significantly, and the area with a high level of material exchange function capacity was reduced by 71%.

Modelling the effects of Spartina alterniflora invasion on the landscape succession of Yancheng coastal natural wetlands, China.

BACKGROUND: The Yancheng coastal natural wetlands (YCNR) are well-preserved silty tidal flat wetlands in China. Due to the severe invasion of Spartina alterniflora, the native ecosystem has undergone great changes. The successful invasion of S. alterniflora reduced the biodiversity of the YCNR, changed the structure and function of the local ecosystem, and eventually led to the degradation of the ecosystem and the loss of ecosystem function and service. Fully understanding the impact of an alien species invasion on YCNR succession is an important prerequisite for protecting and restoring the wetlands. METHODS: In this study, remote sensing, GIS technology, and a cellular-automaton Markov model were used to simulate the natural succession process of native ecosystems without being affected by alien species. By comparing the landscape of the YCNR with the model simulation results, we gained a better understanding of how alien species affect native landscape-scale ecosystems. RESULTS: During the natural succession of the coastal native wetland ecosystem in the YCNR, the pioneer species S. alterniflora occupied the mudflats and expanded seaward. The whole area expanded and moved seaward with an average annual movement of 58.23 m. Phragmites australis seemed to dominate the competition with S. salsa communities, and the area gradually expanded with an average annual movement of 39.89 m. The invasion of S. alterniflora changed the native ecosystem's spatial succession process, causing the S. salsa ecosystem to be stressed by ecosystems on the side of the sea (S. alterniflora) and that of land (P. australis). The area of the seaward-expanding P. australis ecosystem has been declining. Under a reasonable protected area policy, human activities have enhanced the succession rate of the P. australis ecosystem and have had a small impact on the ecological spatial succession of S. salsa and S. alterniflora.

A multiscale approach to identifying spatiotemporal pattern of habitat selection for red-crowned cranes.

Effective conservation measures largely depend on knowledge of habitat selection of target species. Little is known about the scale characteristics and temporal rhythm of habitat selection of the endangered red-crowned crane, limiting the habitat conservation. Here, two red-crowned cranes were tracked with Global position system (GPS) for two years in Yancheng National Nature Reserve (YNNR). A multiscale approach was developed to identify the spatiotemporal pattern of habitat selection of red-crowned cranes. The results revealed that Red-crowned cranes preferred to select Scirpus mariqueter, ponds, Suaeda salsa, and Phragmites australis, and avoid Spartina alterniflora. In each season, habitat selection ratio for Scirpus mariqueter and ponds was the highest during the day and night, respectively. Further multiscale analysis showed that the percent coverage of Scirpus mariqueter at the 200-m to 500-m scale was the most important predictor for all habitat selection modeling, emphasizing the importance of restoring a large area of Scirpus mariqueter habitat for red-crowned crane population restoration. Additionally, other variables affect habitat selection at different scales, and their contributions vary with seasonal and circadian rhythm. Furthermore, habitat suitability was mapped to provide a direct basis for habitat management. The suitable area of daytime and nighttime habitat accounted for 5.4%-19.0% and 4.6%-10.2% of the study area, respectively, implying the urgency of restoration. The study highlighted the scale and temporal rhythms of habitat selection for various endangered species that depend on small habitats. The proposed multiscale approach applies to the restoration and management of habitats of various endangered species.

"Self-repairing" nanoshell for cell protection.

Self-repair is nature's way of protecting living organisms. However, most single cells are inherently less capable of self-repairing, which greatly limits their wide applications. Here, we present a self-assembly approach to create a nanoshell around the cell surface using nanoporous biohybrid aggregates. The biohybrid shells present self-repairing behaviour, resulting in high activity and extended viability of the encapsulated cells (eukaryotic and prokaryotic cells) in harsh micro-environments, such as under UV radiation, natural toxin invasion, high-light radiation and abrupt pH-value changes. Furthermore, an interaction mechanism is proposed and studied, which is successful to guide design and synthesis of self-repairing biohybrid shells using different bioactive molecules.

Amino acid-based biohybrids for nano-shellization of individual desulfurizing bacteria.

Amino acid-based biohybrids have been developed to self-assemble on the surface of desulfurizing bacteria to form nanothin and nanoporous shells. The shells not only endow the encapsulated cells with reusability, but also offer platforms to incorporate titania and magnetic nanoparticles to improve the desulfurizing activity and the separation efficiency.