RESUMEN
Sco is a mononuclear red copper protein involved in the assembly of cytochrome c oxidase. It is spectroscopically similar to red copper nitrosocyanin, but unlike the latter, which has one copper cysteine thiolate, the former has two. In addition to the two cysteine ligands (C45 and C49), the wild-type (WT) protein from Bacillus subtilis (hereafter named BSco) has a histidine (H135) and an unknown endogenous protein oxygen ligand in a distorted tetragonal array. We have compared the properties of the WT protein to variants in which each of the two coordinating Cys residues has been individually mutated to Ala, using UV/visible, Cu and S K-edge X-ray absorption, electron paramagnetic resonance, and resonance Raman spectroscopies. Unlike the Cu(II) form of native Sco, the Cu(II) complexes of the Cys variants are unstable. The copper center of C49A undergoes autoreduction to the Cu(I) form, which is shown by extended X-ray absorption fine structure to be composed of a novel two-coordinate center with one Cys and one His ligand. C45A rearranges to a new stable Cu(II) species coordinated by C49, H135 and a second His ligand recruited from a previously uncoordinated protein side chain. The different chemistry exhibited by the Cys variants can be rationalized by whether a stable Cu(I) species can be formed by autoredox chemistry. For C49A, the remaining Cys and His residues are trans, which facilitates the formation of the highly stable two-coordinate Cu(I) species, while for C45A such a configuration cannot be attained. Resonance Raman spectroscopy of the WT protein indicates a net weak Cu-S bond strength at approximately 2.24 A corresponding to the two thiolate-copper bonds, whereas the single variant C45A shows a moderately strong Cu-S bond at approximately 2.16 A. S K-edge data give a total covalency of 28% for both Cu-S bonds in the WT protein. These data suggest an average covalency per Cu-S bond lower than that observed for nitrosocyanin and close to that expected for type-2 Cu(II)-thiolate systems. The data are discussed relative to the unique Cu-S characteristics of cupredoxins, from which it is concluded that Sco does not contain highly covalent Cu-S bonds of the type expected for long-range electron-transfer reactivity.
Asunto(s)
Alanina/química , Proteínas Bacterianas/química , Cobre/química , Cisteína/química , Proteínas de la Membrana/química , Alanina/genética , Alanina/metabolismo , Bacillus subtilis/citología , Bacillus subtilis/genética , Bacillus subtilis/metabolismo , Proteínas Bacterianas/genética , Proteínas Bacterianas/metabolismo , Cobre/metabolismo , Cisteína/genética , Cisteína/metabolismo , Variación Genética , Ligandos , Proteínas de la Membrana/genética , Proteínas de la Membrana/metabolismo , Modelos Moleculares , Mutagénesis Sitio-Dirigida , Espectrofotometría Ultravioleta , Espectrometría Raman , Compuestos de Sulfhidrilo/química , Compuestos de Sulfhidrilo/metabolismo , Espectroscopía de Absorción de Rayos XRESUMEN
Most bacteria and fungi produce low-molecular-weight iron chelators called siderophores. Although different siderophore structures have been characterized, the iron-binding moieties often contain catecholate or hydroxamate groups. Siderophores function because of their extraordinarily high stability constants (K(STAB) = 10(30)-10(49)) and selectivity for Fe(III), yet the origin of these high stability constants has been difficult to quantify experimentally. Herein, we utilize Fe L-edge X-ray absorption spectroscopy to determine the differential orbital covalency (i.e., the differences in the mixing of the metal d-orbitals with ligand valence orbitals) of a series of siderophore model compounds. The results enable evaluation of the electronic structure contributions to their high stability constants in terms of sigma- and pi-donor covalent bonding, ionic bonding, and solvent effects. The results indicate substantial differences in the covalent contributions to stability constants of hydroxamate and catecholate complexes and show that increased sigma as well as pi bonding contributes to the high stability constants of catecholate complexes.
Asunto(s)
Hierro , Sideróforos/química , Espectroscopía de Absorción de Rayos X/métodos , Electrones , Ligandos , Metales/química , Teoría CuánticaRESUMEN
Sulfur K-edge X-ray absorption spectroscopy has been proven to be a powerful tool for investigating the electronic structures of sulfur-containing coordination complexes. The full information content of the spectra can be developed through a combination of experiment and time-dependent density functional theory (TD-DFT). In this work, the necessary calibration is carried out for a range of contemporary functionals (BP86, PBE, OLYP, OPBE, B3LYP, PBE0, TPSSh) in a scalar relativistic (0(th) order regular approximation, ZORA) DFT framework. It is shown that with recently developed segmented all-electron scalar relativistic (SARC) basis sets one obtains results that are as good as with large, uncontracted basis sets. The errors in the calibrated transition energies are on the order of 0.1 eV. The error in calibrated intensities is slightly larger, but the calculations are still in excellent agreement with experiment. The behavior of full TD-DFT linear response versus the Tamm-Dancoff approximation has been evaluated with the result that two methods are almost indistinguishable. The inclusion of relativistic effects barely changes the results for first row transition metal complexes, however, the contributions become visible for second-row transition metals and reach a maximum (of an approximately 10% change in the calibration parameters) for third row transition metal species. The protocol developed here is approximately 10 times more efficient than the previously employed protocol, which was based on large, uncontracted basis sets. The calibration strategy followed here may be readily extended to other edges.
RESUMEN
Despite a wealth of studies exemplifying the utility of the 2-5 keV X-ray range in speciation and electronic structure elucidation, the exploitation of this energy regime for the study of photochemical processes has not been forthcoming. Herein, a new endstation set-up for in situ photochemical soft X-ray spectroscopy in the 2-5 keV energy region at the Stanford Synchrotron Radiation Lightsource is described for continuous photolysis under anaerobic conditions at both cryogenic and ambient temperatures. Representative examples of this approach are used to demonstrate the potential information content in several fields of study, including organometallic chemistry, biochemistry and materials chemistry.
Asunto(s)
Absorciometría de Fotón/métodos , Procesos Fotoquímicos , Metionina/análogos & derivados , Metionina/efectos de la radiación , Compuestos Organometálicos/química , Compuestos Organometálicos/efectos de la radiación , SincrotronesRESUMEN
Oxidation of the diferric complex [LFe(III)OFe(III)L] to the monoradical complex [LFe(III)OFe(III)L ](+) and the diradical complex [L Fe(III)OFe(III)L ](2+) is followed by a decay into monomeric complexes including a highly reactive putative [LFe(IV)[double bond, length as m-dash]O] complex.
Asunto(s)
Compuestos Férricos/química , Oxígeno/química , Electroquímica , Oxidación-Reducción , Análisis EspectralRESUMEN
The reaction of cis-[Fe(III)(cyclam)Cl(2)]Cl with 1 equiv of sodium N-diethyldithiocarbamate, toluene-3,4-dithiolate, and maleonitriledithiolate in methanol in the presence of triethylamine afforded the cations [Fe(III)(cyclam)(Et(2)dtc)](2+) (1), [Fe(III)(cyclam)(tdt)](+) (2), and [Fe(III)(cyclam)(mnt)](+) (3), which were isolated as triflate, hexafluorophosphate, and tetrafluoroborate salt, respectively, using sodium triflate, potassium hexafluorophosphate, or sodium tetrafluoroborate as the source for the counteranion. Complexes 1, 2, and 3 possess an S = (1)/(2) ground state (low-spin ferric d(5)). These salts were characterized by X-ray crystallography, UV-vis, Mössbauer, and electron paramagnetic resonance spectroscopies. Cyclic voltammetry revealed that 2 and 3 are reversibly one-electron-reduced, generating neutral 2(red) and 3(red), respectively, and one-electron-oxidized, generating dicationic 2(ox) and 3(ox), respectively. Fe and S K-edge X-ray absorption spectroscopy (XAS) revealed that 2 (S = (1)/(2)) and 2(ox) (S = 0) possess a low-spin ferric ion. Complexes 2 and 3 are S,S'-coordinated to a closed-shell dithiolate(2-) ligand, whereas 2(ox) and 3(ox) consist of a low-spin ferric ion antiferromagnetically coupled to a dithiolate(1-) pi radical ligand. They are singlet diradicals [Fe(III)(cyclam)(dithiolate(*))](2+). The analysis of the sulfur K pre-edge transitions reveals significant multiplet effects in the spectra of 2 and 2(ox), which provide rare experimental evidence for a singlet diradical description for 2(ox). Mössbauer spectroscopy on frozen solutions of 2(red) clearly show the presence of a high-spin ferrous ion (S = 2). The experimentally established electronic structures of the three members of the electron transfer series [Fe(cyclam)(dithiolate)](2+,+,0) have been verified by broken symmetry density functional theoretical calculations, which have been calibrated against the experiment by calculating XAS and Mössbauer spectra.
Asunto(s)
Hierro/química , Lactamas Macrocíclicas/química , Compuestos Organometálicos/química , Compuestos de Sulfhidrilo/química , Aniones/química , Cristalografía por Rayos X , Espectroscopía de Resonancia por Spin del Electrón , Radicales Libres/química , Ligandos , Modelos Moleculares , Estructura Molecular , Espectrofotometría , Espectroscopía de MossbauerRESUMEN
From the reaction mixture of 3,6-dichlorobenzene-1,2-dithiol, H(2)(Cl(2)-bdt), [CrCl(3)(thf)(3)], and NEt(3) in tetrahydrofuran (thf) in the presence of air, dark green crystals of [N(n-Bu)(4)](2)[Cr(Cl(2)-bdt)(3)] (S = 1) (1) were isolated upon addition of [N(n-Bu)(4)]Br. Oxidation of the AsPh(4)(+) salt of 1 with [Fc]PF(6) yielded microcrystals of [AsPh(4)][Cr(Cl(2)-bdt)(3)] (S = (1)/(2)) (2) whereas the reduction of 1 with sodium amalgam produced light green crystals of [N-(n-Bu)(4)](3)[Cr(Cl(2)-bdt)(3)].thf (S = (3)/(2)) (3). The corresponding maleonitriledithiolato complexes [PPh(4)](2)[Cr(mnt)(3)] (S = 1) (4) and [PPh(4)](3)[Cr(mnt)(3)] (S = (3)/(2)) (5) have been synthesized. Isoelectronic manganese complexes of 3 and 5, namely, [NEt(4)](2)[Mn(Cl(2)-bdt)(3)] (S = (3)/(2)) (6) and [PPh(4)](2)[Mn(mnt)(3)] (S = (3)/(2)) (7), have also been prepared. Complexes 1, 6, and 7 have been characterized by single crystal X-ray crystallography. Complexes 1-7 have been electrochemically studied and their UV-vis and electron paramagnetic resonance spectra (EPR) have been recorded; magnetic properties have been elucidated by temperature-dependent susceptibility measurements. It is shown by chromium K-edge and sulfur K-edge X-ray absorption spectroscopy (XAS) that the oxidation state of the central Cr ion in each compound is the same (+III, d(3)) and that all one-electron redox processes are ligand-based, involving one, two, or three ligand pi radical monoanions. Complexes 6 and 7 possess a Mn(IV) ion with three dianionic ligands. The results have been corroborated by broken symmetry (BS) density functional theoretical (DFT) calculations by using the B3LYP functional. Time-dependent DFT calculations have been performed to calculate the metal and sulfur K-pre-edges. It is suggested that the neutral complexes [Cr(dithiolene)(3)](0) S = 0 possess octahedral rather than trigonal prismatic CrS(6) polyhedra. Three ligand pi radicals (S(rad) = (1)/(2)) couple antiferromagnetically to the central Cr(III) ion (d(3)) yielding the observed diamagnetic ground state. It is established that the four members of the [Cr(dithiolene)(3)](z) (z = 0, 1-, 2-, 3-) electron transfer series are related by ligand-based one-electron transfer processes; for each of the four members it is shown that they contain a central Cr(III) (d(3)) ion, and the CrS(6) polyhedron is a (distorted) octahedron.
Asunto(s)
Cromo/química , Manganeso/química , Modelos Teóricos , Análisis Espectral/métodos , Cristalografía por Rayos X , Espectroscopía de Resonancia por Spin del Electrón , Electrones , Estructura Molecular , Rayos XRESUMEN
The reaction of [Ru(III)(cyclam)Cl(2)]Cl with 2 equiv of sodium N,N-diethyldithiocarbamate in methanol afforded [Ru(II)(cyclam)(Et(2)dtc)](BPh(4)) (1(BPh(4))). The same reaction with only 1 equiv of toluene-3,4-dithiol and a base yielded [Ru(cyclam)(tdt)](PF(6)) (2(PF(6))) which was oxidized by 1 equiv of ferrocenium hexafluorophosphate generating [Ru(cyclam)(tdt)](PF(6))(2) (2(ox)(PF(6))(2)). The crystal structures of 1 and 2 have been determined by X-ray crystallography at 100 K. The electronic structures of diamagnetic 1(BPh(4)), paramagnetic 2(PF(6)) (S = (1)/(2)), and diamagnetic 2(ox)(PF(6))(2) have been studied by magnetochemistry, spectroelectrochemistry, electron paramagnetic resonance spectroscopy, and (1)H NMR spectroscopy. X-ray absorption spectroscopy on Ru K- and L-edges as well as S K-edges has been employed. Finally, the molecular and electronic structures of all three species have been calculated by using density functional theory (B3LYP). It is shown that 2(ox) comprises an electronic structure which is best described by three resonance structures {[Ru(II)(cyclam)(tdt(0))](2+) <--> [Ru(III)(cyclam)(tdt(*))](2+) <--> [Ru(IV)(cyclam)(tdt(2-))](2+)} with a closed-shell singlet ground state. This is in stark contrast to the isoelectronic iron species, namely, [Fe(III)(cyclam)(tdt(*))](2+) which is a singlet diradical with a low-spin ferric ion coupled intramolecularly antiferromagnetically to a ligand pi radical monoanion (tdt(*))(-).
Asunto(s)
Cristalografía por Rayos X , Electrones , Compuestos Heterocíclicos/química , Compuestos de Rutenio/química , Tiocarbamatos/química , Etanol/síntesis química , Etanol/química , Compuestos Heterocíclicos/síntesis química , Modelos Moleculares , Estructura Molecular , Teoría Cuántica , Compuestos de Rutenio/síntesis química , Tiocarbamatos/síntesis química , Tolueno/análogos & derivados , Tolueno/síntesis química , Tolueno/químicaRESUMEN
The reaction of ReCl(5) with 3 equiv of a benzene-1,2-dithiolate derivative in CH(3)CN produced, after the addition of [C(8)H(16)N]Br ([C(8)H(16)N](+) is 5-azonia-spiro[4,4]nonane), brownish-green crystals of [C(8)H(16)N][Re(tms)(3)] (1c) and [C(8)H(16)N][Re(Cl(2)-bdt)(3)] (2c), where (tms)(2-) represents 3,6-bis(trimethylsilyl)benzene-1,2-dithiolate and (Cl(2)-bdt)(2-) is 3,6-dichlorobenzene-1,2-dithiolate. Chemical reduction of [Re(bdt)(3)] (3b) with n-butyllithium in the presence of PPh(4)Br yielded [PPh(4)][Re(bdt)(3)] (3c), where (bdt)(2-) is benzene-1,2-dithiolate. The three monoanionic complexes possess a diamagnetic ground state (Re(V), d(2), S = 0). The crystal structures of 1c x 2 CH(3)CN and 2c x C(3)H(6)O have been determined by X-ray crystallography. The electrochemistry establishes that the complexes are members of electron transfer series involving a monocation [Re(V)(L(*))(2)(L)](+) (S = 0(?)), a neutral [Re(V)(L(*))(L)(2)](0) (S = 1/2), a monoanion [Re(V)(L)(3)](1-) (S = 0), a dianion [Re(IV)(L)(3)](2-) (S = 1/2), and a trianion [Re(III)(L)(3)](3-) (S = 1(?)). The unique X-band EPR spectrum of the neutral species clearly describes a diamagnetic Re(V) d(2) central ion with the unpaired electron located in a purely ligand-centered molecular orbital, whereas it is metal-centered in the dianionic form: a Re(IV) d(3) ion with three dithiolate(2-) ligands. S K-edge and Re L-edge X-ray absorption spectroscopy confirms these assignments and furthermore shows that the monoanion has a Re(V) central ion with three dianionic ligands. The geometrical and electronic structures of all members of the electron transfer series have been calculated by density functional theoretical methods, and the S K-pre-edge spectra have been simulated and assigned using a time-dependent DFT protocol.
Asunto(s)
Electrones , Modelos Químicos , Compuestos Organometálicos/química , Renio/química , Cristalografía por Rayos X , Espectroscopía de Resonancia por Spin del Electrón , Ligandos , Modelos Moleculares , Teoría CuánticaRESUMEN
Corrole is a tetrapyrrolic macrocycle that has one carbon atom less than a porphyrin. The ring contraction reduces the symmetry from D(4h) to C(2v), changes the electronic structure of the heterocycle, and leads to a smaller central cavity with three protons rather than the two of a porphyrin. The differences between ferric corroles and porphyrins lead to a number of differences in reactivity including increased axial ligand lability and a tendency to form 5-coordinate complexes. The electronic structure origin of these differences has been difficult to study experimentally as the dominant porphyrin/corrole pi --> pi* transitions obscure the electronic transitions of the metal. Recently, we have developed a methodology that allows for the interpretation of the multiplet structure of Fe L-edges in terms of differential orbital covalency (i.e., the differences in mixing of the metal d orbitals with the ligand valence orbitals) using a valence bond configuration interaction model. Herein, we apply this methodology, combined with a ligand field analysis of the Fe K pre-edge to a low-spin ferric corrole, and compare it to a low-spin ferric porphyrin. The experimental results combined with DFT calculations show that the contracted corrole is both a stronger sigma donor and a very anisotropic pi donor. These differences decrease the bonding interactions with axial ligands and contribute to the increased axial ligand lability and reactivity of ferric corroles relative to ferric porphyrins.
Asunto(s)
Compuestos Férricos/química , Metaloporfirinas/química , Electrones , Modelos Químicos , Porfirinas/química , Espectroscopía de Absorción de Rayos XRESUMEN
Reaction of 2,4-(2,2'-dipyridylamino)-6-(2-pyridylhydrazino)-1,3,5-triazine, abbreviated dppht (5), with copper(II) chloride in methanol yields a mixed-valent Cu(II)(4)Cu(I) compound (6), also involving the presence of a radical anion. The single-crystal structure determination for [Cu(5)(5(M))(5(MR))Cl(8)] (6) reveals that the original dppht ligand (5) has been monochlorinated at one of its pyridine rings and oxidized at its hydrazyl moiety, generating the ligand 2,4-(2,2'-dipyridylamino)-6-(2-(5-chloropyridyl)azo)-1,3,5-triazine (5(M)). Moreover, the molecular structure of 6 indicates that one of the two coordinated ligands 5(M) is in a radical-anion state, symbolized as 5(MR), characterized by a typical N-N bond length of about 1.33 A for a one-electron reduced azo group. The nature of this unique [Cu(II)(4)Cu(I)(radical)] assembly is corroborated by X-ray absorption spectroscopy, electron paramagnetic resonance, and magnetic susceptibility measurements. Density-functional theory calculations are consistent with the unprecedented structural features and support the spectroscopic data.
Asunto(s)
Cobre/química , Cristalografía por Rayos X , Espectroscopía de Resonancia por Spin del Electrón , Ligandos , Magnetismo , Modelos Moleculares , Conformación Molecular , Compuestos Organometálicos/química , Triazinas/química , Espectroscopía de Absorción de Rayos XRESUMEN
An N for Ir: The synthesis and X-ray crystal structure of a late-transition-metal complex with a terminal nitrido ligand and its hydrogenation to the related amido complex are reported (see scheme).
RESUMEN
This Communication addresses a long-standing problem: the exact vibrational assignments of the low-energy modes of the Fe-N-O subunit in six-coordinate ferrous heme nitrosyl model complexes. This problem is addressed using nuclear resonance vibrational spectroscopy (NRVS) coupled to (15)N(18)O isotope labeling and detailed simulations of the obtained data. Two isotope-sensitive features are identified at 437 and 563 cm(-1). Normal coordinate analysis shows that the 437 cm(-1) mode corresponds to the Fe-NO stretch, whereas the 563 cm(-1) band is identified with the Fe-N-O bend. The relative NRVS intensities of these features determine the degree of vibrational mixing between the stretch and the bend. The implications of these results are discussed with respect to the trans effect of imidazole on the bound NO. In addition, a comparison to myoglobin-NO (Mb-NO) is made to determine the effect of the Mb active site pocket on the bound NO.
Asunto(s)
Hemo/química , Óxidos de Nitrógeno/química , Espectroscopía de Resonancia por Spin del Electrón/métodos , Cinética , Modelos Moleculares , Conformación Molecular , Isótopos de Nitrógeno , Isótopos de Oxígeno , Análisis Espectral , Termodinámica , VibraciónRESUMEN
Iron K-edge X-ray absorption pre-edge features have been calculated using a time-dependent density functional approach. The influence of functional, solvation, and relativistic effects on the calculated energies and intensities has been examined by correlation of the calculated parameters to experimental data on a series of 10 iron model complexes, which span a range of high-spin and low-spin ferrous and ferric complexes in O(h) to T(d) geometries. Both quadrupole and dipole contributions to the spectra have been calculated. We find that good agreement between theory and experiment is obtained by using the BP86 functional with the CP(PPP) basis set on the Fe and TZVP one of the remaining atoms. Inclusion of solvation yields a small improvement in the calculated energies. However, the inclusion of scalar relativistic effects did not yield any improved correlation with experiment. The use of these methods to uniquely assign individual spectral transitions and to examine experimental contributions to backbonding is discussed.
Asunto(s)
Compuestos Férricos/química , Compuestos Ferrosos/química , Hierro/química , Metales/química , Absorciometría de Fotón/métodos , Electrones , Cinética , Oxidación-Reducción , TermodinámicaRESUMEN
Many proteins contain copper in a range of coordination environments, where it has various biological roles, such as transferring electrons or activating dioxygen. These copper sites can be classified by their function or spectroscopic properties. Those with a single copper atom are either type 1, with an intense absorption band near 600 nm, or type 2, with weak absorption in the visible region. We have built a novel copper(II) binding site within structurally modified Pseudomonas aeruginosa azurins that does not resemble either existing type, which we therefore call 'type zero'. X-ray crystallographic analysis shows that these sites adopt distorted tetrahedral geometries, with an unusually short CuO (G45 carbonyl) bond. Relatively weak absorption near 800 nm and narrow parallel hyperfine splittings in electron paramagnetic resonance spectra are the spectroscopic signatures of type zero copper. Cyclic voltammetric experiments demonstrate that the electron transfer reactivities of type-zero azurins are enhanced relative to that of the corresponding type 2 (C112D) protein.
Asunto(s)
Azurina/química , Cobre/química , Pseudomonas aeruginosa/química , Absorción , Azurina/metabolismo , Sitios de Unión , Cobre/metabolismo , Cristalografía por Rayos X , Electroquímica , Espectroscopía de Resonancia por Spin del Electrón , Transporte de Electrón , Oxígeno/química , Oxígeno/metabolismo , Pseudomonas aeruginosa/metabolismoRESUMEN
Recent advances in synthetic chemistry have led to the discovery of "superoxidized" iron centers with valencies Fe(v) and Fe(vi) [K. Meyer et al., J. Am. Chem. Soc., 1999, 121, 4859-4876; J. F. Berry et al., Science, 2006, 312, 1937-1941; F. T. de Oliveira et al., Science, 2007, 315, 835-838.]. Furthermore, in recent years a number of high-valent Fe(iv) species have been found as reaction intermediates in metalloenzymes and have also been characterized in model systems [C. Krebs et al., Acc. Chem. Res., 2007, 40, 484-492; L. Que, Jr, Acc. Chem. Res., 2007, 40, 493-500.]. These species are almost invariably stabilized by a highly basic ligand X(n-) which is either O(2-) or N(3-). The differences in structure and bonding between oxo- and nitrido species as a function of oxidation state and their consequences on the observable spectroscopic properties have never been carefully assessed. Hence, fundamental differences between high-valent iron complexes having either Fe=O or Fe=N multiple bonds have been probed computationally in this work in a series of hypothetical trans-[FeO(NH(3))(4)OH](+/2+/3+) (1-3) and trans-[FeN(NH(3))(4)OH](0/+/2+) (4-6) complexes. All computational properties are permeated by the intrinsically more covalent character of the Fe=N multiple bond as compared to the Fe=O bond. This difference is likely due to differences in Z* between N and O that allow for better orbital overlap to occur in the case of the Fe=N multiple bond. Spin-state energetics were addressed using elaborate multireference ab initio computations that show that all species 1-6 have an intrinsic preference for the low-spin state, except in the case of 1 in which S=1 and S=2 states are very close in energy. In addition to Mössbauer parameters, g-tensors, zero-field splitting and iron hyperfine couplings, X-ray absorption Fe K pre-edge spectra have been simulated using time-dependent DFT methods for the first time for a series of compounds spanning the high-valent states +4, +5, and +6 for iron. A remarkably good correlation of these simulated pre-edge features with experimental data on isolated high-valent intermediates has been found, allowing us to assign the main pre-edge features to excitations into the empty Fe d(z(2)) orbital, which is able to mix with Fe 4p(z), allowing an efficient mechanism for the intensification of pre-edge features.
Asunto(s)
Simulación por Computador , Compuestos Férricos/química , Modelos Químicos , Superóxidos , Electrones , Modelos Moleculares , Estructura Molecular , Oxidación-Reducción , Teoría Cuántica , Espectroscopía de Mossbauer , Análisis Espectral , Rayos XRESUMEN
The reaction of 3 equiv of the ligand 2-mercapto-3,5-di-tert-butylaniline, H2[LN,S], or 3,5-di-tert-butyl-1,2-benzenedithiol, H2[LS,S], with 1 equiv of [MoO2(acac)2] or WCl6 (acac=acetonylacetate(1-)) in methanol or CCl4 afforded the diamagnetic neutral complexes [MoV(LN,S)2(L*N,S)]0 (1), [MoV(LS,S)2(L*S,S)] (2), and [WV(LS,S)2(L*S,S)] (3), where (L*N,S)- and (L*S,S)- represent monoanionic pi-radical ligands (Srad=1/2), which are the one-electron oxidized forms of the corresponding closed-shell dianions (LN,S)2- and (LS,S)2-. Complexes 1-3 are trigonal-prismatic members of the electron-transfer series [ML3]z (z=0, 1-, 2-). Reaction of 2 and 3 with [N(n-Bu)4](SH) in CH2Cl2 under anaerobic conditions afforded paramagnetic crystalline [N(n-Bu)4][MoV(LS,S)3] (4) and [N(n-Bu)4][WV(LS,S)3] (5). Complexes 1-5 have been characterized by X-ray crystallography. S K-edge X-ray absorption and infrared spectroscopy prove that a pi-radical ligand (L*S,S)- is present in neutral 2 and 3, whereas the monoanions [MV(LS,S)3]- contain only closed-shell dianionic ligands. These neutral species have previously been incorrectly described as [MVI(L)3]0 complexes with a MoVI or WVI (d0) central metal ion; they are, in fact MV (d1) (M=Mo, W) species: [MoV(LS,S)2(L*S,S)] and [WV(LS,S)2(L*S,S)] with a diamagnetic ground state St=0, which is generated by intramolecular, antiferromagnetic coupling between the MV (d1) central ion (SM=1/2) and a ligand pi radical (L*S,S)- (Srad=1/2).
Asunto(s)
Aniones/química , Benceno/química , Electrones , Molibdeno/química , Compuestos Organometálicos/química , Compuestos de Sulfhidrilo/química , Tungsteno/química , Cristalografía por Rayos X , Ligandos , Modelos Moleculares , Estructura Molecular , Oxidación-Reducción , Análisis EspectralRESUMEN
The electronic structures of [M(L(Bu))(2)](-) (L(Bu)=3,5-di-tert-butyl-1,2-benzenedithiol; M=Ni, Pd, Pt, Cu, Co, Au) complexes and their electrochemically generated oxidized and reduced forms have been investigated by using sulfur K-edge as well as metal K- and L-edge X-ray absorption spectroscopy. The electronic structure content of the sulfur K-edge spectra was determined through detailed comparison of experimental and theoretically calculated spectra. The calculations were based on a new simplified scheme based on quasi-relativistic time-dependent density functional theory (TD-DFT) and proved to be successful in the interpretation of the experimental data. It is shown that dithiolene ligands act as noninnocent ligands that are readily oxidized to the dithiosemiquinonate(-) forms. The extent of electron transfer strongly depends on the effective nuclear charge of the central metal, which in turn is influenced by its formal oxidation state, its position in the periodic table, and scalar relativistic effects for the heavier metals. Thus, the complexes [M(L(Bu))(2)](-) (M=Ni, Pd, Pt) and [Au(L(Bu))(2)] are best described as delocalized class III mixed-valence ligand radicals bound to low-spin d(8) central metal ions while [M(L(Bu))(2)](-) (M=Cu, Au) and [M(L(Bu))(2)](2-) (M=Ni, Pd, Pt) contain completely reduced dithiolato(2-) ligands. The case of [Co(L(Bu))(2)](-) remains ambiguous. On the methodological side, the calculation led to the new result that the transition dipole moment integral is noticeably different for S(1s)-->valence-pi versus S(1s)-->valence-sigma transitions, which is explained on the basis of the differences in radial distortion that accompany chemical bond formation. This is of importance in determining experimental covalencies for complexes with highly covalent metal-sulfur bonds from ligand K-edge absorption spectroscopy.