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1.
Nature ; 577(7792): 631-635, 2020 01.
Artículo en Inglés | MEDLINE | ID: mdl-31996819

RESUMEN

Hydrogen has been an essential element in the development of atomic, molecular and condensed matter physics1. It is predicted that hydrogen should have a metal state2; however, understanding the properties of dense hydrogen has been more complex than originally thought, because under extreme conditions the electrons and protons are strongly coupled to each other and ultimately must both be treated as quantum particles3,4. Therefore, how and when molecular solid hydrogen may transform into a metal is an open question. Although the quest for metal hydrogen has pushed major developments in modern experimental high-pressure physics, the various claims of its observation remain unconfirmed5-7. Here a discontinuous change of the direct bandgap of hydrogen, from 0.6 electronvolts to below 0.1 electronvolts, is observed near 425 gigapascals. This result is most probably associated with the formation of the metallic state because the nucleus zero-point energy is larger than this lowest bandgap value. Pressures above 400 gigapascals are achieved with the recently developed toroidal diamond anvil cell8, and the structural changes and electronic properties of dense solid hydrogen at 80 kelvin are probed using synchrotron infrared absorption spectroscopy. The continuous downward shifts of the vibron wavenumber and the direct bandgap with increased pressure point to the stability of phase-III hydrogen up to 425 gigapascals. The present data suggest that metallization of hydrogen proceeds within the molecular solid, in good agreement with previous calculations that capture many-body electronic correlations9.

2.
Nature ; 564(7734): 59-63, 2018 12.
Artículo en Inglés | MEDLINE | ID: mdl-30405236

RESUMEN

Abiotic hydrocarbons and carboxylic acids are known to be formed on Earth, notably during the hydrothermal alteration of mantle rocks. Although the abiotic formation of amino acids has been predicted both from experimental studies and thermodynamic calculations, its occurrence has not been demonstrated in terrestrial settings. Here, using a multimodal approach that combines high-resolution imaging techniques, we obtain evidence for the occurrence of aromatic amino acids formed abiotically and subsequently preserved at depth beneath the Atlantis Massif (Mid-Atlantic Ridge). These aromatic amino acids may have been formed through Friedel-Crafts reactions catalysed by an iron-rich saponite clay during a late alteration stage of the massif serpentinites. Demonstrating the potential of fluid-rock interactions in the oceanic lithosphere to generate amino acids abiotically gives credence to the hydrothermal theory for the origin of life, and may shed light on ancient metabolisms and the functioning of the present-day deep biosphere.


Asunto(s)
Modelos Químicos , Origen de la Vida , Triptófano/análisis , Triptófano/síntesis química , Silicatos de Aluminio/química , Océano Atlántico , Arcilla/química , Evolución Química , Fluorescencia , Hierro/química
3.
Phys Rev Lett ; 129(3): 035501, 2022 Jul 15.
Artículo en Inglés | MEDLINE | ID: mdl-35905331

RESUMEN

How are nuclear quantum fluctuations affecting the properties of dense hydrogen approaching metallization? We report here Raman spectroscopy and synchrotron infrared absorption measurements on deuterium up to 460 GPa at 80 K. By comparing to a previous similar study on hydrogen, isotopic effects on the electronic and vibrational properties in phase III are disclosed. Also, evidence of a probable transition to metal deuterium is observed, shifted by about 35 GPa compared to that in hydrogen. Advanced calculations, quantifying a reduction of the band gap caused by nuclear quantum fluctuations, are compared to the present data.

4.
J Synchrotron Radiat ; 28(Pt 6): 1927-1934, 2021 Nov 01.
Artículo en Inglés | MEDLINE | ID: mdl-34738948

RESUMEN

SESAME (Synchrotron-light for Experimental Science and Applications in the Middle East) is the only synchrotron light facility in the Middle East and neighboring regions, officially opened in 2017. Among the identification and construction of the first operational beamlines, infrared spectromicroscopy was selected as one of the two beamlines to be opened to the general users' program (the so-called Day-1 beamlines). Being one of the most demanded techniques by various scientific communities in the Middle East, the beamline has been designed and implemented in the framework of a collaboration agreement with the French synchrotron facility, SOLEIL. The design, construction and initial performances of the IR beamline (D02-IR), nowadays operational, are reported.


Asunto(s)
Sesamum , Sincrotrones , Medio Oriente
5.
Microsc Microanal ; : 1-4, 2021 Sep 21.
Artículo en Inglés | MEDLINE | ID: mdl-34544518

RESUMEN

Atom probe tomography was employed to observe and derive the composition of carbon clusters in implanted silicon. This value, which is of interest to the microelectronic industry when considering ion implantation defects, was estimated not to exceed 2 at%. This measurement has been done by fitting the distribution of first nearest neighbor distances between monoatomic carbon ions (C+ and C2+). Carbon quantification has been considerably improved through the detection of molecular ions, using lower electric field conditions as well as equal proportions of 12C and 13C. In these conditions and using another quantification method, we have shown that the carbon content in clusters approaches 50 at%. This result very likely indicates that clusters are nuclei of the SiC phase.

6.
Anal Bioanal Chem ; 412(26): 7049-7061, 2020 Oct.
Artículo en Inglés | MEDLINE | ID: mdl-32839857

RESUMEN

Fourier transform infrared (FTIR) spectroscopy has proven to be a non-invasive tool to analyse cells without the hurdle of employing exogenous dyes or probes. Nevertheless, the study of single live bacteria in their aqueous environment has long remained a big challenge, due to the strong infrared absorption of water and the small size of bacteria compared to the micron-range infrared wavelengths of the probing photons. To record infrared spectra of bacteria in an aqueous environment, at different spatial resolutions, two setups were developed. A custom-built attenuated total reflection inverted microscope was coupled to a synchrotron-based FTIR spectrometer, using a germanium hemisphere. With such a setup, a projected spot size of 1 × 1 µm2 was achieved, which allowed spectral acquisition at the single-cell level in the 1800-1300 cm-1 region. The second setup used a demountable liquid micro-chamber with a thermal source-powered FTIR microscope, in transmission geometry, for probing clusters of a few thousands of live cells in the mid-IR region (4000-975 cm-1). Both setups were applied for studying two strains of a model lactic acid bacterium exhibiting different cryo-resistances. The two approaches allowed the discrimination of both strains and revealed population heterogeneity among bacteria at different spatial resolutions. The multivariate analysis of spectra indicated that the cryo-sensitive cells presented the highest cell heterogeneity and the highest content of proteins with the α-helix structure. Furthermore, the results from clusters of bacterial cells evidenced phosphate and peptidoglycan vibrational bands associated with the cell envelope, as potential markers of resistance to environmental conditions. Graphical Abstract.


Asunto(s)
Bacterias/metabolismo , Espectroscopía Infrarroja por Transformada de Fourier/métodos , Sincrotrones , Bacterias/efectos de la radiación
7.
Biochem Biophys Res Commun ; 503(3): 1861-1867, 2018 09 10.
Artículo en Inglés | MEDLINE | ID: mdl-30057314

RESUMEN

Despite the major success obtained by the use of tyrosine kinase inhibitors (TKI) in chronic myeloid leukemia (CML), resistances to therapies occur due to mutations in the ABL-kinase domain of the BCR-ABL oncogene. Amongst these mutations, the "gatekeeper" T315I is a major concern as it renders leukemic cells resistant to all licenced TKI except Ponatinib. We report here that Fourier transform infrared (FTIR) microspectroscopy is a powerful methodology allowing rapid and direct identification of a spectral signature in single cells expressing T315I-mutated BCR-ABL. The specificity of this spectral signature is confirmed using a Dox-inducible T315I-mutated BCR-ABL-expressing human UT-7 cells as well as in murine embryonic stem cells. Transcriptome analysis of UT-7 cells expressing BCR-ABL as compared to BCR-ABL T315I clearly identified a molecular signature which could be at the origin of the generation of metabolic changes giving rise to the spectral signature. Thus, these results suggest that this new methodology can be applied to the identification of leukemic cells harbouring the T315I mutation at the single cell level and could represent a novel early detection tool of mutant clones. It could also be applied to drug screening strategies to target T315I-mutated leukemic cells.


Asunto(s)
Proteínas de Fusión bcr-abl/metabolismo , Leucemia Mielógena Crónica BCR-ABL Positiva/genética , Espectroscopía Infrarroja por Transformada de Fourier , Animales , Línea Celular , Proteínas de Fusión bcr-abl/genética , Humanos , Leucemia Mielógena Crónica BCR-ABL Positiva/metabolismo , Leucemia Mielógena Crónica BCR-ABL Positiva/patología , Ratones , Mutación
8.
Opt Express ; 26(9): 11238-11249, 2018 Apr 30.
Artículo en Inglés | MEDLINE | ID: mdl-29716048

RESUMEN

Synchrotron infrared nanospectroscopy is a recently developed technique that enables new possibilities in the broadband chemical analysis of materials in the nanoscale, far beyond the diffraction limit in this frequency domain. Synchrotron infrared ports have exploited mainly the high brightness advantage provided by electron storage rings across the whole infrared range. However, optical aberrations in the beam produced by the source depth of bending magnet emission at large angles prevent infrared nanospectroscopy to reach its maximum capability. In this work we present a low-aberration optical layout specially designed and constructed for a dedicated synchrotron infrared nanospectroscopy beamline. We report excellent agreement between simulated beam profiles (from standard wave propagation and raytracing optics simulations) with experimental measurements. We report an important improvement in the infrared nanospectroscopy experiment related to the improved beamline optics. Finally, we demonstrate the performance of the nanospectroscopy endstation by measuring a hyperspectral image of a polar material and we evaluate the setup sensitivity by measuring ultra-thin polymer films down to 6 nm thick.

9.
Proc Natl Acad Sci U S A ; 112(25): 7673-6, 2015 Jun 23.
Artículo en Inglés | MEDLINE | ID: mdl-26056306

RESUMEN

The prediction of novel lithium hydrides with nontraditional stoichiometries at high pressure has been seminal for highlighting a promising line of research on hydrogen-dense materials. Here, we report the evidences of the disproportionation of LiH above 130 GPa to form lithium hydrides containing H2 units. Measurements have been performed using the nonperturbing technique of synchrotron infrared absorption. The observed vibron frequencies match the predictions for LiH2 and LiH6. These polyhydrides remain insulating up to 215 GPa. A disproportionation mechanism based on the diffusion of lithium into the diamond anvil and a stratification of the sample into LiH6/LiH2/LiH layers is proposed. Polyhydrides containing an H2 sublattice do exist and could be ubiquitously stable at high pressure.

10.
J Transl Med ; 14: 9, 2016 Jan 12.
Artículo en Inglés | MEDLINE | ID: mdl-26754490

RESUMEN

BACKGROUND: Hepatocarcinogenesis is a multistep process characterized in patients with chronic liver diseases by a spectrum of hepatic nodules that mark the progression from regenerative nodules to dysplastic lesions followed by hepatocellular carcinoma (HCC). The differential diagnosis between precancerous dysplastic nodules and early HCC still represents a challenge for both radiologists and pathologists. We addressed the potential of Fourier transform-infrared (FTIR) microspectroscopy for grading cirrhotic nodules on frozen tissue sections. METHODS: The study was focused on 39 surgical specimens including normal livers (n = 11), dysplastic nodules (n = 6), early HCC (n = 1), progressed HCC on alcoholic cirrhosis (n = 10) or hepatitis C virus cirrhosis (n = 11). The use of the bright infrared source emitted by the synchrotron radiation allowed investigating the biochemical composition at the cellular level. Chemical mapping on whole tissue sections was further performed using a FTIR microscope equipped with a laboratory-based infrared source. The variance was addressed by principal component analysis. RESULTS: Profound alterations of the biochemical composition of the pathological liver were demonstrated by FTIR microspectroscopy. Indeed, dramatic changes were observed in lipids, proteins and sugars highlighting the metabolic reprogramming in carcinogenesis. Quantifiable spectral markers were characterized by calculating ratios of areas under specific bands along the infrared spectrum. These markers allowed the discrimination of cirrhotic nodules, dysplastic lesions and HCC. Finally, the spectral markers can be measured using a laboratory FTIR microscope that may be easily implemented at the hospital. CONCLUSION: Metabolic reprogramming in liver carcinogenesis can constitute a signature easily detectable using FTIR microspectroscopy for the diagnosis of precancerous and cancerous lesions.


Asunto(s)
Carcinoma Hepatocelular/diagnóstico , Carcinoma Hepatocelular/patología , Cirrosis Hepática/diagnóstico , Cirrosis Hepática/patología , Neoplasias Hepáticas/diagnóstico , Neoplasias Hepáticas/patología , Vibración , Adulto , Anciano de 80 o más Años , Biomarcadores de Tumor/metabolismo , Femenino , Humanos , Hiperplasia , Lípidos/análisis , Masculino , Persona de Mediana Edad , Proteínas de Neoplasias/análisis , Espectroscopía Infrarroja por Transformada de Fourier , Sincrotrones
11.
Analyst ; 141(3): 870-83, 2016 Feb 07.
Artículo en Inglés | MEDLINE | ID: mdl-26688861

RESUMEN

Hypoxia is a common feature of solid tumours and is associated with poor prognosis, resistance to radio- and chemotherapy, and tumour aggressiveness. For predictive purposes as well as for improved therapeutic intervention, it is increasingly needed to have direct and specific diagnostic tools in order to measure the extent of, and changes in, tumour hypoxia. In this article, we have investigated the potential of Fourier Transform Infrared (FTIR) microspectroscopy, at cellular and subcellular resolution, for detecting hypoxia-induced metabolic changes in brain tumour (glioblastoma) cell lines and in short term primary cultures derived from patient samples. The most prominent and common changes observed were the increase in glycogen (specifically in the U87MG cell line) and lipids (all cell lines studied). Additionally, each cell line presented specific individual metabolic fingerprints. The metabolic changes did not evolve markedly with time (from 1 to 5 days hypoxic incubation), and yet were harder to detect under chronic hypoxic conditions, which is consistent with cellular adaptation occurring upon long term changes in the microenvironment. The metabolic signature was similar regardless of the severity of the hypoxic insult and was replicated by the hypoxia mimetic drug dimethyloxalylglycine (DMOG). To investigate any specific changes at subcellular levels and to improve the sensitivity of the detection method, spectra were recorded separately in the cytoplasm and in the nucleus of D566 glioblastoma cells, thanks to the use of a synchrotron source. We show that this method provides improved detection in both cell compartments. Whilst there was a high spectral variability between cell lines, we show that FTIR microspectroscopy allowed the detection of the common metabolic changes triggered by hypoxia regardless of cell type, providing a potential new approach for the detection of hypoxic tumours.


Asunto(s)
Biomarcadores de Tumor/metabolismo , Neoplasias Encefálicas/metabolismo , Glioblastoma/metabolismo , Neoplasias Encefálicas/patología , Hipoxia de la Célula , Núcleo Celular/metabolismo , Citoplasma/metabolismo , Ácidos Grasos Insaturados/metabolismo , Glioblastoma/patología , Glucógeno/metabolismo , Células HeLa , Humanos , Subunidad alfa del Factor 1 Inducible por Hipoxia/metabolismo , Microespectrofotometría , Fosfolípidos/análisis , Espectroscopía Infrarroja por Transformada de Fourier
12.
Analyst ; 140(17): 5920-8, 2015 Sep 07.
Artículo en Inglés | MEDLINE | ID: mdl-26212688

RESUMEN

Freezing is widely used for preserving different types of cells. Frozen concentrates of lactic acid bacteria (LAB) are extensively used for manufacturing food, probiotic products and for green chemistry and medical applications. However, the freezing and thawing processes cause cell injuries that result in significant cell death. Producing homogeneous bacterial populations with high cryotolerance remains a real challenge. Our objective was to investigate the biochemical and physiological changes in a LAB model at the cell scale following fermentation and freezing in order to identify cellular biomarkers of cryotolerance. Infrared spectra of individual bacteria produced by applying different fermentation and freezing conditions were acquired using synchrotron radiation-based Fourier-transform infrared (SR-FTIR) microspectroscopy to achieve sub-cellular spatial resolution. Fluorescent microscopy was concomitantly assessed, thus making possible to simultaneously analyse the biochemistry and physiological state of a single cell for the first time. Principal component analysis was used to evaluate changes in cell composition, with particular focus on lipids, proteins and polysaccharides. SR-FTIR results indicated that before freezing, freeze-resistant cells grown in a rich medium presented a high content of CH3 groups from lipid chains, of cell proteins in an α-helix secondary structure and of charged polymers such as teichoic and lipoteichoic acids that constitute the Gram-positive bacterial wall. Moreover, SR-FTIR microspectroscopy made it possible to reveal cell heterogeneity within the cluster of resistant cells, which was ascribed to the diversity of potential substrates in the growth medium. Freezing and thawing processes induced losses of membrane integrity and cell viability in more than 90% of the freeze-sensitive bacterial population. These damages leading to cell death were ascribed to biochemical modification of cell membrane phospholipids, in particular a rigidification of the cytoplasmic membrane following freezing. Furthermore the freeze-resistant cells remained viable after freezing and thawing but a modification of protein secondary structure was detected by SR-FTIR analysis. These results highlighted the potential application of bimodal analysis by SR-FTIR and fluorescence microscopy to increase our knowledge about mechanisms related to cell damage.


Asunto(s)
Lactobacillus/fisiología , Microscopía Fluorescente , Espectroscopía Infrarroja por Transformada de Fourier , Colorantes Fluorescentes/química , Congelación , Lactobacillus/química , Lactobacillus/crecimiento & desarrollo , Análisis de Componente Principal , Compuestos de Selenio/química , Compuestos de Zinc/química
13.
Analyst ; 140(7): 2190-204, 2015 Apr 07.
Artículo en Inglés | MEDLINE | ID: mdl-25705743

RESUMEN

In this study, ketogenic diet-induced biochemical changes occurring in normal and epileptic hippocampal formations were compared. Four groups of rats were analyzed, namely seizure experiencing animals and normal rats previously fed with ketogenic (KSE and K groups respectively) or standard laboratory diet (NSE and N groups respectively). Synchrotron radiation based Fourier-transform infrared microspectroscopy was used for the analysis of distributions of the main organic components (proteins, lipids, compounds containing phosphate group(s)) and their structural modifications as well as anomalies in creatine accumulation with micrometer spatial resolution. Infrared spectra recorded in the molecular layers of the dentate gyrus (DG) areas of normal rats on a ketogenic diet (K) presented increased intensity of the 1740 cm(-1) absorption band. This originates from the stretching vibrations of carbonyl groups and probably reflects increased accumulation of ketone bodies occurring in animals on a high fat diet compared to those fed with a standard laboratory diet (N). The comparison of K and N groups showed, moreover, elevated ratios of absorbance at 1634 and 1658 cm(-1) for DG internal layers and increased accumulation of creatine deposits in sector 3 of the Ammon's horn (CA3) hippocampal area of ketogenic diet fed rats. In multiform and internal layers of CA3, seizure experiencing animals on ketogenic diet (KSE) presented a lower ratio of absorbance at 1634 and 1658 cm(-1) compared to rats on standard laboratory diet (NSE). Moreover, in some of the examined cellular layers, the increased intensity of the 2924 cm(-1) lipid band as well as the massifs of 2800-3000 cm(-1) and 1360-1480 cm(-1), was found in KSE compared to NSE animals. The intensity of the 1740 cm(-1) band was diminished in DG molecular layers of KSE rats. The ketogenic diet did not modify the seizure induced anomalies in the unsaturation level of lipids or the number of creatine deposits.


Asunto(s)
Dieta Cetogénica/efectos adversos , Hipocampo/efectos de los fármacos , Convulsiones/etiología , Convulsiones/metabolismo , Animales , Creatina/metabolismo , Hipocampo/metabolismo , Metabolismo de los Lípidos/efectos de los fármacos , Masculino , Fosfatos/metabolismo , Proteínas/metabolismo , Ratas , Ratas Wistar , Convulsiones/patología
14.
Analyst ; 140(4): 1107-18, 2015 Feb 21.
Artículo en Inglés | MEDLINE | ID: mdl-25581590

RESUMEN

Non-alcoholic fatty liver disease (NAFLD) is a frequent lesion associated with obesity, diabetes and the metabolic syndrome. The hallmark feature of fatty liver disease is steatosis, which is the intra-cellular accumulation of lipids resulting in the formation of vesicles in hepatocytes. Steatosis is a precursor of steatohepatitis, a condition that may progress to hepatic fibrosis, cirrhosis and primary liver cancer. We addressed the potential of Fourier transform-infrared (FTIR) microspectroscopy for grading steatosis on frozen tissue sections. The use of the bright infrared source emitted by synchrotron radiation (SR) allowed the investigation of the biochemical composition at the cellular level. The variance in the huge number of spectra acquired was addressed by principal component analysis (PCA). The study demonstrated that the progression of steatosis corresponds not only to the accumulation of lipids but also to dramatic changes in the qualitative composition of the tissue. Indeed, a lower grade of steatosis showed a decrease in glycogen content and a concomitant increase in lipids in comparison with normal liver. Intermediate steatosis exhibited an increase in glycogen and major changes in lipids, with a significant contribution of esterified fatty acids with elongated carbon chains and unsaturated lipids, and these features were more pronounced in a high grade of steatosis. Furthermore, the approach allows a systematic discrimination of morphological features, leading to a separate investigation of steatotic vesicles and the non-steatotic counterpart of the tissue. This highlighted the fact that dramatic biochemical changes occur in the non-steatotic part of the tissue also despite its normal histological aspect, suggesting that the whole tissue reflects the grade of steatosis.


Asunto(s)
Hígado Graso/patología , Hígado/química , Hígado/patología , Espectroscopía Infrarroja por Transformada de Fourier/métodos , Adulto , Anciano , Anciano de 80 o más Años , Femenino , Humanos , Lípidos/análisis , Masculino , Persona de Mediana Edad , Análisis Multivariante
15.
Cytometry A ; 85(8): 688-97, 2014 Aug.
Artículo en Inglés | MEDLINE | ID: mdl-24845779

RESUMEN

Over the last few years, significant scientific insight on the effects of chemotherapy drugs at cellular level using synchrotron-based FTIR (S-FTIR) microspectroscopy has been obtained. The work carried out so far has identified spectral differences in cancer cells before and after the addition of drugs. However, this had to account for the following issues. First, chemotherapy agents cause both chemical and morphological changes in cells, the latter being responsible for changes in the spectral profile not correlated with biochemical characteristics. Second, as the work has been carried out in mixed populations of cells (resistant and sensitive), it is important to distinguish the spectral differences which are due to sensitivity/resistance to those due to cell morphology and/or cell mixture. Here, we successfully cloned resistant and sensitive lung cancer cells to a chemotherapy drug. This allowed us to study a more uniform population and, more important, allowed us to study sensitive and resistant cells prior to the addition of the drug with S-FTIR microscopy. Principal component analysis (PCA) did not detect major differences in resistant cells prior to and after adding the drug. However, PCA separated sensitive cells prior to and after the addition of the drug. This would indicate that the spectral differences between cells prior to and after adding a drug might reside on those more or less sensitive cells that have been able to remain alive when they were collected to be studied with S-FTIR microspectroscopy. This is a proof of concept and a feasibility study showing a methodology that opens a new way to identify the effects of drugs on more homogeneous cell populations using vibrational spectroscopy.


Asunto(s)
Desoxicitidina/análogos & derivados , Resistencia a Antineoplásicos/efectos de los fármacos , Espectroscopía Infrarroja por Transformada de Fourier/métodos , Sincrotrones , Línea Celular Tumoral , Células Clonales , Desoxicitidina/farmacología , Humanos , Análisis de Componente Principal , Gemcitabina
16.
Anal Chem ; 85(7): 3765-73, 2013 Apr 02.
Artículo en Inglés | MEDLINE | ID: mdl-23458159

RESUMEN

Huntington's disease is caused by a polyglutamine expansion in huntingtin. Affected brain regions contain characteristic aggregates of the misfolded expanded protein. Studies in cells and animals show that aggregates are polymorphic and that the secondary structure of the aggregates is likely to condition their cytotoxicity. Therefore knowing the structure of aggregates is important as neurotoxic secondary structures may be specifically targeted during the search for prophylactic or therapeutic drugs. The structure of aggregates in the brain of patients is still unknown. Using synchrotron based infrared microspectroscopy we demonstrate that the brains of patients with Huntington disease contain putative oligomers and various kinds of microscopic aggregates (inclusions) that can be distinguished by their differential absorbance at 1627 cm(-1) (amyloid ß sheets) and 1639 cm(-1) (ß sheets/unordered). We also describe the parallel/antiparallel organization of the ß strands. As the inclusions enriched in both ß sheets and ß sheets/unordered structures are characteristic of severely affected brain regions, we conclude that this kind of amyloid inclusions is likely to be particularly toxic to neurons.


Asunto(s)
Amiloide/análisis , Encéfalo/patología , Enfermedad de Huntington/patología , Proteínas del Tejido Nervioso/análisis , Espectrofotometría Infrarroja/instrumentación , Sincrotrones/instrumentación , Humanos , Proteína Huntingtina , Estructura Secundaria de Proteína
17.
Analyst ; 138(19): 5685-96, 2013 Oct 07.
Artículo en Inglés | MEDLINE | ID: mdl-23897515

RESUMEN

Oriental lacquer has been used in Asian countries for thousands of years as a durable and aesthetic coating material for its adhesive, consolidating, protective and decorative properties. Although these objects are made from an unusual material in Occident, Western museum collections host many lacquerwares. Curators, restorers and scientists are daily confronted with questions of their conservation and their alteration. The characterization of their conservation state is usually assessed through visual observations. However deterioration often starts at the microscopic level and cannot be detected by a simple visual inspection. Often, ageing and deterioration of artworks are connected to physical, mechanical and chemical transformations. Thus new insight into alteration of lacquer involves the monitoring of macro-, microscopic and molecular modifications, and this can be assessed from physico-chemical measurements. Non-invasive (microtopography and Scanning Electron Microscopy - SEM) and micro-invasive (infrared micro-spectroscopy using a synchrotron source - SR-µFTIR) investigations were performed to study the degradation processes of lacquers and evaluate their level of alteration. In particular, spectral decomposition and fitting procedure were performed in the 1820-1520 cm(-1) region to follow the shift of the C=O and C=C band positions during lacquer ageing. The present work proves the potential of this physico-chemical approach in conservation studies of lacquers and in the quantification of the state of alteration. It evidences chemical phenomena of alteration such as oxidation and decomposition of a lacquer polymeric network. It also demonstrates for the first time the degradation front of artificially aged lacquer and the chemical imaging of a more than 2000 years old archaeological lacquer by using SR-µFTIR.


Asunto(s)
Fenómenos Químicos , Laca/análisis , Imagen Multimodal/métodos , Árboles , Asia , Espectroscopía Infrarroja por Transformada de Fourier/métodos , Árboles/química
18.
Anal Bioanal Chem ; 405(8): 2685-97, 2013 Mar.
Artículo en Inglés | MEDLINE | ID: mdl-23354575

RESUMEN

The present work was focused on elucidating biochemical changes in the model bacterium Escherichia coli exposed to ionic silver mediated stress, at a single-cell scale. In order to achieve this, in situ synchrotron Fourier-transform infrared (sFTIR) microspectroscopy was performed, for the first time, on individual cells by attenuated total reflectance (ATR) combined with the use of zinc-selenide hemisphere for high spatial resolution. In a first part, the potential of the method was evaluated on bacteria subjected to a lethal 100 µM AgNO(3) concentration for 2 h compared to untreated 100 % viable cells. Differences in cell composition were assessed for the C-H stretching and protein spectral regions, indicating that the inhibitory action was targeted against both fatty acids and proteins. Transmission electron microscopy (TEM) confirmed morphological damages of the cell ultrastructure. The relevance of ATR-sFTIR microspectroscopy for highlighting the heterogeneity in Ag(+)-mediated effects within a given bacterial population was also pointed out. In a second part, cells were exposed to sub-lethal Ag(+) concentrations (<10 µM AgNO(3)) tested under "dynamic" growth mode: early addition vs. pulse in the mid-exponential phase, and compared to simultaneously batch-grown untreated bacteria or cells sampled just before the pulse, respectively. sFTIR microspectroscopy and TEM imaging were performed in close relation with growth kinetics characterization. No significant effect of the Ag(+) pulses was detected, in accordance with macrokinetics data. For early-treated cells, effects on fatty acid composition were shown, although no major alteration of protein secondary structure was noticed. These partial effects were consistent with TEM observations and growth kinetics.


Asunto(s)
Escherichia coli/efectos de los fármacos , Escherichia coli/fisiología , Nitrato de Plata/farmacología , Análisis de la Célula Individual/métodos , Espectroscopía Infrarroja por Transformada de Fourier/métodos , Escherichia coli/citología , Espectroscopía Infrarroja por Transformada de Fourier/instrumentación , Estrés Fisiológico/efectos de los fármacos , Sincrotrones
19.
Anal Chem ; 84(23): 10260-6, 2012 Dec 04.
Artículo en Inglés | MEDLINE | ID: mdl-23121424

RESUMEN

Liver is subject to various chronic pathologies, progressively leading to cirrhosis, which is associated with an increased risk of hepatocellular carcinoma. There is an urgent need for diagnostic and prognostic markers of chronic liver diseases and liver cancer. Spectroscopy-based approaches can provide an overview of the chemical composition of a tissue sample offering the possibility of investigating in depth the subtle chemical changes associated with pathological states. In this study, we have addressed the composition of cirrhotic liver tissue by combining synchrotron Fourier transform infrared (FTIR) microspectroscopy and synchrotron micro-X-ray fluorescence (XRF) on the same tissue section using a single sample holder in copper. This allowed investigation of the in situ biochemical as well as elemental composition of cells and tissues at high spatial resolution. Cirrhosis is characterized by regeneration nodules surrounded by annular fibrosis. Hepatocytes within cirrhotic nodules were characterized by high content in esters and sugars as well as in phosphorus and iron compared with fibrotic septa. A high heterogeneity was observed between cirrhotic nodules in their content in sugars and iron. On fibrosis, synchrotron XRF revealed enrichment in calcium compared to cirrhotic hepatocytes. Careful scrutiny of tissue sections led to detection of the presence of microcrystals that were demonstrated as precipitates of calcite using synchrotron FTIR. These results demonstrated that synchrotron FTIR and synchrotron XRF microspectroscopies provide complementary information on the chemical composition of cirrhotic hepatocytes and fibrotic septa in cirrhosis.


Asunto(s)
Cobre/análisis , Cirrosis Hepática/metabolismo , Hígado/química , Espectrometría de Fluorescencia/métodos , Espectroscopía Infrarroja por Transformada de Fourier/métodos , Sincrotrones , Adulto , Anciano , Calcio/análisis , Femenino , Humanos , Hígado/metabolismo , Cirrosis Hepática/patología , Masculino , Persona de Mediana Edad
20.
Phys Chem Chem Phys ; 14(8): 2864-74, 2012 Feb 28.
Artículo en Inglés | MEDLINE | ID: mdl-22261934

RESUMEN

Superheated water has been studied by infrared spectroscopy to examine whether the special ability of liquid water to undergo such a metastable state corresponds to the development of peculiar inter-molecular networking under tension. As the best technique to superheat water is to trap the liquid inside micro-cavities in solids (the so-called "fluid inclusions"), the role of the water-solid interfaces to stabilize the adjoining liquid is also explored with the same infra-red micro-spectroscopy tool. The key signal is the intra-molecular OH stretching band, sensitive to the networking in the probed material. The sample of choice is liquid water occluded inside a quartz cavity of micrometric size, synthesized in laboratory from pure quartz and milli-Q water. The stretching band of the superheated water shows no significant spectral difference from that of a bulk "normal" water, which means that the molecular properties of the superheating liquid are quite similar to those of the stable bulk liquid. Liquid water is readily "superheatable" but retains its "normality" under these special conditions. Additionally, this result establishes a firm ground to justify that the properties of the former are predicted extrapolating the usual (though empirical) equation of state of the latter. The infra-red signals of the water-solid interfaces are more complex. The water-solid interfaces blue-shift the signal, affecting differently the three sub-bands of the OH-stretching. This effect was unexpected since the micro-IR spectroscopy probes volume beyond what is classically assigned for the interfacial properties. In addition, the interfacial signature is clearer under superheating than under the saturation conditions, which offers an interesting (and unexpected) way to interpret the special stability of the occluded metastable water. These encouraging results give confidence on the potentialities of the high-resolution micro-spectroscopy to get insights into the molecular basis of macroscopic properties.

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