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1.
Biophys J ; 87(1): 696-713, 2004 Jul.
Artículo en Inglés | MEDLINE | ID: mdl-15240503

RESUMEN

The mechanism of functional coupling between mitochondrial creatine kinase (MiCK) and adenine nucleotide translocase (ANT) in isolated heart mitochondria is analyzed. Two alternative mechanisms are studied: 1), dynamic compartmentation of ATP and ADP, which assumes the differences in concentrations of the substrates between intermembrane space and surrounding solution due to some diffusion restriction and 2), direct transfer of the substrates between MiCK and ANT. The mathematical models based on these possible mechanisms were composed and simulation results were compared with the available experimental data. The first model, based on a dynamic compartmentation mechanism, was not sufficient to reproduce the measured values of apparent dissociation constants of MiCK reaction coupled to oxidative phosphorylation. The second model, which assumes the direct transfer of substrates between MiCK and ANT, is shown to be in good agreement with experiments--i.e., the second model reproduced the measured constants and the estimated ADP flux, entering mitochondria after the MiCK reaction. This model is thermodynamically consistent, utilizing the free energy profiles of reactions. The analysis revealed the minimal changes in the free energy profile of the MiCK-ANT interaction required to reproduce the experimental data. A possible free energy profile of the coupled MiCK-ANT system is presented.


Asunto(s)
Creatina Quinasa/metabolismo , Isoenzimas/metabolismo , Mitocondrias/enzimología , Translocasas Mitocondriales de ADP y ATP/metabolismo , Modelos Teóricos , Fosforilación Oxidativa , Adenosina Difosfato/química , Adenosina Trifosfato/química , Animales , Simulación por Computador , Forma Mitocondrial de la Creatina-Quinasa , Difusión , Humanos , Termodinámica
2.
Mol Cell Biochem ; 256-257(1-2): 229-41, 2004.
Artículo en Inglés | MEDLINE | ID: mdl-14977184

RESUMEN

Recent studies have revealed the structural and functional interactions between mitochondria, myofibrils and sarcoplasmic reticulum in cardiac cells. Direct channeling of adenosine phosphates between organelles identified in the experiments indicates that diffusion of adenosine phosphates is limited in cardiac cells due to very specific intracellular structural organization. However, the mode of diffusion restrictions and nature of the intracellular structures in creating the diffusion barriers is still unclear, and, therefore, a subject of active research. The aim of this work is to analyze the possible role of two principally different modes of restriction distribution for adenosine phosphates (a) the uniform diffusion restriction and (b) the localized diffusion limitation in the vicinity of mitochondria, by fitting the experimental data with the mathematical model. The reaction-diffusion model of compartmentalized energy transfer was used to analyze the data obtained from the experiments with the skinned muscle fibers, which described the following processes: mitochondrial respiration rate dependency on exogenous ADP and ATP concentrations; inhibition of endogenous ADP-stimulated respiration by pyruvate kinase (PK) and phosphoenolpyruvate (PEP) system; kinetics of oxygen consumption stabilization after addition of 2 mM MgATP or MgADP; ATPase activity with inhibited mitochondrial respiration; and buildup of MgADP concentration in the medium after addition of MgATP. The analysis revealed that only the second mechanism considered--localization of diffusion restrictions--is able to account for the experimental data. In the case of uniform diffusion restrictions, the model solution was in agreement only with two measurements: the respiration rate as a function of ADP or ATP concentrations and inhibition of respiration by PK + PEP. It was concluded that intracellular diffusion restrictions for adenosine phosphates are not distributed uniformly, but rather are localized in certain compartments of the cardiac cells.


Asunto(s)
Adenosina Difosfato/metabolismo , Adenosina Trifosfato/metabolismo , Miocardio/metabolismo , Adenosina Trifosfatasas/metabolismo , Animales , Medios de Cultivo , Difusión , Femenino , Cinética , Masculino , Fosforilación Oxidativa , Consumo de Oxígeno , Ratas , Ratas Wistar
3.
Biophys J ; 84(5): 3436-56, 2003 May.
Artículo en Inglés | MEDLINE | ID: mdl-12719270

RESUMEN

Heterogeneity of ADP diffusion and regulation of respiration were studied in permeabilized cardiomyocytes and cardiac fibers in situ and in silico. Regular arrangement of mitochondria in cells was altered by short-time treatment with trypsin and visualized by confocal microscopy. Manipulation of matrix volumes by changing K(+) and sucrose concentrations did not affect the affinity for ADP either in isolated heart mitochondria or in skinned fibers. Pyruvate kinase (PK)-phosphoenolpyruvate (PEP) were used to trap ADP generated in Ca,MgATPase reactions. Inhibition of respiration by PK-PEP increased 2-3 times after disorganization of regular mitochondrial arrangement in cells. ADP produced locally in the mitochondrial creatine kinase reaction was not accessible to PK-PEP in intact permeabilized fibers, but some part of it was released from mitochondria after short proteolysis due to increased permeability of outer mitochondrial membrane. In in silico studies we show by mathematical modeling that these results can be explained by heterogeneity of ADP diffusion due to its restrictions at the outer mitochondrial membrane and in close areas, which is changed after proteolysis. Localized restrictions and heterogeneity of ADP diffusion demonstrate the importance of mitochondrial functional complexes with sarcoplasmic reticulum and myofibrillar structures and creatine kinase in regulation of oxidative phosphorylation.


Asunto(s)
Adenosina Difosfato/fisiología , Respiración de la Célula/fisiología , Hemostasis/fisiología , Mitocondrias Cardíacas/fisiología , Modelos Cardiovasculares , Fibras Musculares Esqueléticas/fisiología , Miocitos Cardíacos/fisiología , Adenosina Difosfato/metabolismo , Animales , Células Cultivadas , Simulación por Computador , Difusión , Corazón/fisiología , Mitocondrias Cardíacas/ultraestructura , Fibras Musculares Esqueléticas/citología , Miocardio/citología , Miocitos Cardíacos/citología , Ratas
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