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BMC Bioinformatics ; 21(1): 465, 2020 Oct 19.
Artículo en Inglés | MEDLINE | ID: mdl-33076824

RESUMEN

BACKGROUND: oposSOM is a comprehensive, machine learning based open-source data analysis software combining functionalities such as diversity analyses, biomarker selection, function mining, and visualization. RESULTS: These functionalities are now available as interactive web-browser application for a broader user audience interested in extracting detailed information from high-throughput omics data sets pre-processed by oposSOM. It enables interactive browsing of single-gene and gene set profiles, of molecular 'portrait landscapes', of associated phenotype diversity, and signalling pathway activation patterns. CONCLUSION: The oposSOM-Browser makes available interactive data browsing for five transcriptome data sets of cancer (melanomas, B-cell lymphomas, gliomas) and of peripheral blood (sepsis and healthy individuals) at www.izbi.uni-leipzig.de/opossom-browser .


Asunto(s)
Atención a la Salud , Genómica , Programas Informáticos , Navegador Web , Humanos , Linfoma de Células B/genética , Aprendizaje Automático
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