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1.
Mol Cell ; 81(9): 1920-1934.e9, 2021 05 06.
Artículo en Inglés | MEDLINE | ID: mdl-33689748

RESUMEN

Transcription by RNA polymerase II (Pol II) is coupled to pre-mRNA splicing, but the underlying mechanisms remain poorly understood. Co-transcriptional splicing requires assembly of a functional spliceosome on nascent pre-mRNA, but whether and how this influences Pol II transcription remains unclear. Here we show that inhibition of pre-mRNA branch site recognition by the spliceosome component U2 snRNP leads to a widespread and strong decrease in new RNA synthesis from human genes. Multiomics analysis reveals that inhibition of U2 snRNP function increases the duration of Pol II pausing in the promoter-proximal region, impairs recruitment of the pause release factor P-TEFb, and reduces Pol II elongation velocity at the beginning of genes. Our results indicate that efficient release of paused Pol II into active transcription elongation requires the formation of functional spliceosomes and that eukaryotic mRNA biogenesis relies on positive feedback from the splicing machinery to the transcription machinery.


Asunto(s)
ARN Polimerasa II/metabolismo , ARN Mensajero/biosíntesis , Ribonucleoproteína Nuclear Pequeña U2/metabolismo , Empalmosomas/enzimología , Elongación de la Transcripción Genética , Animales , Proteínas de Drosophila/genética , Proteínas de Drosophila/metabolismo , Drosophila melanogaster/enzimología , Drosophila melanogaster/genética , Retroalimentación Fisiológica , Regulación de la Expresión Génica , Células HeLa , Humanos , Células K562 , Factor B de Elongación Transcripcional Positiva/genética , Factor B de Elongación Transcripcional Positiva/metabolismo , Regiones Promotoras Genéticas , ARN Polimerasa II/genética , Precursores del ARN/genética , Precursores del ARN/metabolismo , Empalme del ARN , ARN Mensajero/genética , Ribonucleoproteína Nuclear Pequeña U2/genética , Saccharomyces cerevisiae/enzimología , Saccharomyces cerevisiae/genética , Proteínas de Saccharomyces cerevisiae/genética , Proteínas de Saccharomyces cerevisiae/metabolismo , Empalmosomas/genética , Factores de Tiempo
2.
EMBO J ; 40(9): e107015, 2021 05 03.
Artículo en Inglés | MEDLINE | ID: mdl-33555055

RESUMEN

Eukaryotic RNA polymerase II (Pol II) contains a tail-like, intrinsically disordered carboxy-terminal domain (CTD) comprised of heptad-repeats, that functions in coordination of the transcription cycle and in coupling transcription to co-transcriptional processes. The CTD repeat number varies between species and generally increases with genome size, but the reasons for this are unclear. Here, we show that shortening the CTD in human cells to half of its length does not generally change pre-mRNA synthesis or processing in cells. However, CTD shortening decreases the duration of promoter-proximal Pol II pausing, alters transcription of putative enhancer elements, and delays transcription activation after stimulation of the MAP kinase pathway. We suggest that a long CTD is required for efficient enhancer-dependent recruitment of Pol II to target genes for their rapid activation.


Asunto(s)
ARN Polimerasa II/química , ARN Polimerasa II/metabolismo , Eliminación de Secuencia , Activación Transcripcional , Elementos de Facilitación Genéticos , Perfilación de la Expresión Génica , Humanos , Sistema de Señalización de MAP Quinasas , Regiones Promotoras Genéticas , Dominios Proteicos , ARN Polimerasa II/genética
3.
BMC Genomics ; 21(1): 403, 2020 Jun 15.
Artículo en Inglés | MEDLINE | ID: mdl-32539834

RESUMEN

BACKGROUND: Mycoplasma anserisalpingitidis is a waterfowl pathogen that mainly infects geese, can cause significant economic losses and is present worldwide. With the advance of whole genome sequencing technologies, new methods are available for the researchers; one emerging methodology is the core genome Multi-Locus Sequence Typing (cgMLST). The core genome contains a high percentage of the coding DNA sequence (CDS) set of the studied strains. The cgMLST schemas are powerful genotyping tools allowing for the investigation of potential epidemics, and precise and reliable classification of the strains. Although whole genome sequences of M. anserisalpingitidis strains are available, to date, no cgMLST schema has been published for this species. RESULTS: In this study, Illumina short reads of 81 M. anserisalpingitidis strains were used, including samples from Hungary, Poland, Sweden, and China. Draft genomes were assembled with the SPAdes software and analysed with the online available chewBBACA program. User made modifications in the program enabled analysis of mycoplasmas and provided similar results as the conventional SeqSphere+ software. The threshold of the presence of CDS in the strains was set to 93% due to the quality of the draft genomes, resulting in the most accurate and robust schema. Three hundred thirty-one CDSs constituted our cgMLST schema (representing 42,77% of the whole CDS set of M. anserisalpingitidis ATCC BAA-2147), and a Neighbor joining tree was created using the allelic profiles. The correlation was observed between the strains' cgMLST profile and geographical origin; however, strains from the same integration but different locations also showed close relationship. Strains isolated from different tissue samples of the same animal revealed highly similar cgMLST profiles. CONCLUSIONS: The Neighbor joining tree from the cgMLST schema closely resembled the real-life spatial and temporal relationships of the strains. The incongruences between background data and the cgMLST profile in the strains from the same integration can be because of the higher probability of contacts between the flocks. This schema can help with the epidemiological investigation and can be used as a basis for further studies.


Asunto(s)
Genoma Bacteriano , Mycoplasma/clasificación , Mycoplasma/genética , Animales , Gansos/microbiología , Genotipo , Epidemiología Molecular , Tipificación de Secuencias Multilocus , Filogenia , Secuenciación Completa del Genoma
4.
Genes Dev ; 26(8): 857-71, 2012 Apr 15.
Artículo en Inglés | MEDLINE | ID: mdl-22508729

RESUMEN

Epigenetic memory mediated by Polycomb group (PcG) proteins must be maintained during cell division, but must also be flexible to allow cell fate transitions. Here we quantify dynamic chromatin-binding properties of PH::GFP and PC::GFP in living Drosophila in two cell types that undergo defined differentiation and mitosis events. Quantitative fluorescence recovery after photobleaching (FRAP) analysis demonstrates that PcG binding has a higher plasticity in stem cells than in more determined cells and identifies a fraction of PcG proteins that binds mitotic chromatin with up to 300-fold longer residence times than in interphase. Mathematical modeling examines which parameters best distinguish stem cells from differentiated cells. We identify phosphorylation of histone H3 at Ser 28 as a potential mechanism governing the extent and rate of mitotic PC dissociation in different lineages. We propose that regulation of the kinetic properties of PcG-chromatin binding is an essential factor in the choice between stability and flexibility in the establishment of cell identities.


Asunto(s)
Diferenciación Celular , Cromatina/metabolismo , Mitosis , Proteínas Represoras/metabolismo , Células Madre/citología , Animales , Proteínas de Drosophila/metabolismo , Drosophila melanogaster/citología , Recuperación de Fluorescencia tras Fotoblanqueo , Proteínas Fluorescentes Verdes/metabolismo , Histonas/metabolismo , Modelos Biológicos , Fosforilación , Proteínas del Grupo Polycomb , Serina/metabolismo , Células Madre/metabolismo
5.
BMC Vet Res ; 15(1): 1, 2019 Jan 03.
Artículo en Inglés | MEDLINE | ID: mdl-30606179

RESUMEN

BACKGROUND: Mycoplasma synoviae (MS) is an important poultry pathogen worldwide. This bacterium may cause eggshell changes including an altered shell surface, thinning, and increased translucency in different areas, which leads to a greater incidence of eggshell cracks and breaks. In the present study the association between experimental infection of birds with two field strains of MS from different genotypes and the production of abnormal eggs is described. The analysis of those eggshells using a full-field optical coherence tomography (FF OCT) scanner is also reported. RESULTS: Eggshell samples were obtained from three experimental groups of chickens: one control and two infected tracheally with field strains of MS which produced abnormal eggs. In both experimental groups infected with MS a reduction of mean daily egg production by 11% was observed compared to the control group, which started at 21 to 42 dpi. Eggshell apex abnormalities increased to 24.5% of eggs and in some cases, soft-shelled eggs were produced. This study provides the first analysis of shells from anomalous eggs carried out using FF OCT, which allows three-dimensional structural imaging of an investigated sample at micrometre scale. FF OCT showed ultrastructural changes in eggshells and a smaller number of pores on the entire surface of the affected shells. CONCLUSIONS: The eggshell pathology and the concomitant egg production losses that result from infections highlight the economic significance of MS in commercial poultry. There are differences in the strains of MS which may induce eggshell apex abnormalities (EAA) and egg production losses. The use of FF OCT, which is a noninvasive measurement method based on analysis of the light backscattered from the measured object, will confer the ability to control the quality of eggshells in flocks infected with MS.


Asunto(s)
Cáscara de Huevo/anomalías , Infecciones por Mycoplasma/veterinaria , Mycoplasma synoviae/genética , Enfermedades de las Aves de Corral/patología , Animales , Pollos/microbiología , Cáscara de Huevo/diagnóstico por imagen , Cáscara de Huevo/microbiología , Femenino , Genotipo , Infecciones por Mycoplasma/patología , Oviposición , Reacción en Cadena de la Polimerasa/veterinaria , Análisis de Secuencia de ADN , Tomografía de Coherencia Óptica/veterinaria
6.
J Cell Biochem ; 118(7): 1741-1755, 2017 07.
Artículo en Inglés | MEDLINE | ID: mdl-27935099

RESUMEN

The main physiological function of MCPIP1 (regnase-1) is negative regulation of inflammation. Moreover, roles of regnase-1 in apoptosis and differentiation have also been described, but its involvement in cancer is yet to be fully recognized. Earlier, we showed a lack of expression of MCPIP1 in both primary tumors and several neuroblastoma cell lines. Additionally, we reported that levels of MCPIP1 and the key neuroblastoma oncoprotein-MYCN were inversely correlated in BE(2)-C clones overexpressing the MCPIP1 gene. Here, we show that exogenous expression of the MCPIP1 protein decreases MYCN mRNA and protein levels without changing the MYCN mRNA half-life. Furthermore, it was shown that MCPIP1-wt exogenous expression affects levels and phosphorylation of MYCN partners such as Aurora A (Thr288), CDC2 (Tyr15 and Thr161), GSK3ß (Ser9), and key cellular components of Akt/mTOR signaling, which regulate MYCN stability and activation. In accordance with the obtained results, we found increased phosphorylation of MYCN protein at Thr58 that causes destabilization of the oncoprotein. Moreover, it is shown that exogenous expression of MCPIP1 does not cause apoptosis. Our data extend knowledge on roles of MCPIP1 in our model and link the protein to regulation of expression and stability of MYCN through decrease of signaling via Akt/mTOR pathway. J. Cell. Biochem. 118: 1741-1755, 2017. © 2016 Wiley Periodicals, Inc.


Asunto(s)
Proteína Proto-Oncogénica N-Myc/metabolismo , Neuroblastoma/metabolismo , Ribonucleasas/metabolismo , Factores de Transcripción/metabolismo , Apoptosis/genética , Apoptosis/fisiología , Aurora Quinasa A/genética , Aurora Quinasa A/metabolismo , Western Blotting , Proteína Quinasa CDC2/genética , Proteína Quinasa CDC2/metabolismo , Diferenciación Celular/genética , Diferenciación Celular/fisiología , Línea Celular Tumoral , Glucógeno Sintasa Quinasa 3 beta/genética , Glucógeno Sintasa Quinasa 3 beta/metabolismo , Humanos , Proteína Proto-Oncogénica N-Myc/genética , Neuroblastoma/genética , Fosforilación/genética , Fosforilación/fisiología , Estabilidad Proteica , Proteínas Proto-Oncogénicas c-akt/genética , Proteínas Proto-Oncogénicas c-akt/metabolismo , Ribonucleasas/genética , Transducción de Señal/genética , Transducción de Señal/fisiología , Serina-Treonina Quinasas TOR/genética , Serina-Treonina Quinasas TOR/metabolismo , Factores de Transcripción/genética
7.
Genome Res ; 24(11): 1808-20, 2014 Nov.
Artículo en Inglés | MEDLINE | ID: mdl-25135956

RESUMEN

The selectivity of transcriptional responses to extracellular cues is reflected by the deposition of stimulus-specific chromatin marks. Although histone H3 phosphorylation is a target of numerous signaling pathways, its role in transcriptional regulation remains poorly understood. Here, for the first time, we report a genome-wide analysis of H3S28 phosphorylation in a mammalian system in the context of stress signaling. We found that this mark targets as many as 50% of all stress-induced genes, underlining its importance in signal-induced transcription. By combining ChIP-seq, RNA-seq, and mass spectrometry we identified the factors involved in the biological interpretation of this histone modification. We found that MSK1/2-mediated phosphorylation of H3S28 at stress-responsive promoters contributes to the dissociation of HDAC corepressor complexes and thereby to enhanced local histone acetylation and subsequent transcriptional activation of stress-induced genes. Our data reveal a novel function of the H3S28ph mark in the activation of mammalian genes in response to MAP kinase pathway activation.


Asunto(s)
Histonas/metabolismo , Serina/metabolismo , Estrés Fisiológico/genética , Activación Transcripcional , Células 3T3 , Acetilación , Animales , Inmunoprecipitación de Cromatina , Fibroblastos/citología , Fibroblastos/metabolismo , Perfilación de la Expresión Génica , Ontología de Genes , Estudio de Asociación del Genoma Completo , Células HeLa , Secuenciación de Nucleótidos de Alto Rendimiento , Histona Desacetilasas/genética , Histona Desacetilasas/metabolismo , Humanos , Sistema de Señalización de MAP Quinasas/genética , Ratones , Análisis de Secuencia por Matrices de Oligonucleótidos , Fosforilación , Regiones Promotoras Genéticas/genética , Proteínas Quinasas S6 Ribosómicas 90-kDa/genética , Proteínas Quinasas S6 Ribosómicas 90-kDa/metabolismo
8.
Biochim Biophys Acta ; 1839(8): 711-8, 2014 Aug.
Artículo en Inglés | MEDLINE | ID: mdl-24747175

RESUMEN

Systematic analysis of histone modifications has revealed a plethora of posttranslational modifications that mediate changes in chromatin structure and gene expression. Histone phosphorylation is a transient histone modification that becomes induced by extracellular signals, DNA damage or entry into mitosis. Importantly, phosphorylation of histone proteins does lead not only to the binding of specific reader proteins but also to changes in the affinity for readers or writers of other histone modifications. This induces a cross-talk between different chromatin modifications that allows the spatio-temporal control of chromatin-associated events. In this review we will summarize the progress in our current knowledge of factors sensing reversible histone phosphorylation in different biological scenarios. This article is part of a Special Issue entitled: Molecular mechanisms of histone modification function.


Asunto(s)
Proteínas 14-3-3/metabolismo , Cromatina/química , Epigénesis Genética , Histonas/metabolismo , Procesamiento Proteico-Postraduccional , Proteínas 14-3-3/genética , Acetilación , Cromatina/genética , Cromatina/metabolismo , Daño del ADN , Células Eucariotas/citología , Células Eucariotas/metabolismo , Histonas/genética , Humanos , Metilación , Mitosis , Fosforilación , Unión Proteica , Dominios y Motivos de Interacción de Proteínas , Transducción de Señal , Transcripción Genética
9.
Arch Microbiol ; 197(2): 319-25, 2015 Mar.
Artículo en Inglés | MEDLINE | ID: mdl-25413672

RESUMEN

Mycoplasma synoviae (MS) remains a serious concern in production of poultry and affects world production of chickens and turkeys. Loop-mediated isothermal amplification (LAMP) of DNA has been recently used for the identification of different economically important avian pathogens. The aim of this study was to develop LAMP for simple and inexpensive detection of MS strains in poultry using specifically designed primers targeting hemagglutin A (vlh) gene. The assay was conducted in a water bath for 1 h at 63 °C. The results were visualized after addition of SYBR Green(®) fluorescent dye. LAMP was specific exclusively for MS without cross-reactivity with other Mycoplasma species. The sensitivity of LAMP was determined as 10(-1) CFU/ml and was 1,000 times higher than MS-specific polymerase chain reaction. LAMP assay was conducted on 18 MS field strains to ensure its reliability and usefulness. This is the first report on LAMP development and application for the rapid detection of MS isolated from chickens. This simple method may be applied by diagnostic laboratories without access to expensive equipment.


Asunto(s)
Infecciones por Mycoplasma/veterinaria , Mycoplasma synoviae/genética , Técnicas de Amplificación de Ácido Nucleico , Enfermedades de las Aves de Corral/diagnóstico , Enfermedades de las Aves de Corral/microbiología , Animales , Proteínas Bacterianas/genética , Pollos , Cartilla de ADN/genética , Lectinas/genética , Infecciones por Mycoplasma/diagnóstico , Infecciones por Mycoplasma/microbiología , Mycoplasma synoviae/aislamiento & purificación , Reproducibilidad de los Resultados , Sensibilidad y Especificidad
10.
Physiol Plant ; 154(2): 194-209, 2015 Jun.
Artículo en Inglés | MEDLINE | ID: mdl-25214438

RESUMEN

During their lifetime, plants need to adapt to a changing environment, including light and temperature. To understand how these factors influence plant growth, we investigated the physiological and antioxidant responses of two Arabidopsis accessions, Shahdara (Sha) from the Shahdara valley (Tajikistan, Central Asia) in a mountainous area and Lovvik-5 (Lov-5) from northern Sweden to different light and temperature conditions. These accessions originate from different latitudes and have different life strategies, both of which are known to be influenced by light and temperature. We showed that both accessions grew better in high-light and at a lower temperature (16°C) than in low light and at 23°C. Interestingly, Sha had a lower chlorophyll content but more efficient non-photochemical quenching than Lov-5. Sha, also showed a higher expression of vitamin E biosynthetic genes. We did not observe any difference in the antioxidant prenyllipid level under these conditions. Our results suggest that the mechanisms that keep the plastoquinone (PQ)-pool in more oxidized state could play a role in the adaptation of these accessions to their local climatic conditions.


Asunto(s)
Antioxidantes/metabolismo , Arabidopsis/fisiología , Aclimatación , Arabidopsis/genética , Arabidopsis/efectos de la radiación , Arabidopsis/ultraestructura , Clorofila/metabolismo , Luz , Oxidación-Reducción , Hojas de la Planta/genética , Hojas de la Planta/fisiología , Hojas de la Planta/efectos de la radiación , Hojas de la Planta/ultraestructura , Plastoquinona/metabolismo , Suecia , Temperatura
11.
PLoS Genet ; 8(3): e1002540, 2012.
Artículo en Inglés | MEDLINE | ID: mdl-22396659

RESUMEN

A CpG island (CGI) lies at the 5' end of the Airn macro non-protein-coding (nc) RNA that represses the flanking Igf2r promoter in cis on paternally inherited chromosomes. In addition to being modified on maternally inherited chromosomes by a DNA methylation imprint, the Airn CGI shows two unusual organization features: its position immediately downstream of the Airn promoter and transcription start site and a series of tandem direct repeats (TDRs) occupying its second half. The physical separation of the Airn promoter from the CGI provides a model to investigate if the CGI plays distinct transcriptional and epigenetic roles. We used homologous recombination to generate embryonic stem cells carrying deletions at the endogenous locus of the entire CGI or just the TDRs. The deleted Airn alleles were analyzed by using an ES cell imprinting model that recapitulates the onset of Igf2r imprinted expression in embryonic development or by using knock-out mice. The results show that the CGI is required for efficient Airn initiation and to maintain the unmethylated state of the Airn promoter, which are both necessary for Igf2r repression on the paternal chromosome. The TDRs occupying the second half of the CGI play a minor role in Airn transcriptional elongation or processivity, but are essential for methylation on the maternal Airn promoter that is necessary for Igf2r to be expressed from this chromosome. Together the data indicate the existence of a class of regulatory CGIs in the mammalian genome that act downstream of the promoter and transcription start.


Asunto(s)
Islas de CpG/genética , Metilación de ADN , Epigénesis Genética , Impresión Genómica , Regiones Promotoras Genéticas , Precursores del ARN/genética , ARN no Traducido/genética , Animales , Diferenciación Celular , Células Cultivadas , Desarrollo Embrionario , Células Madre Embrionarias , Regulación de la Expresión Génica , Recombinación Homóloga , Factor II del Crecimiento Similar a la Insulina/genética , Factor II del Crecimiento Similar a la Insulina/metabolismo , Ratones , Eliminación de Secuencia , Secuencias Repetidas en Tándem , Sitio de Iniciación de la Transcripción
12.
Molecules ; 20(8): 14533-51, 2015 Aug 12.
Artículo en Inglés | MEDLINE | ID: mdl-26274943

RESUMEN

Novel and promising macromolecular conjugates of the α1-adrenergic blocker prazosin were directly synthesized by covalent incorporation of the drug to matrices composed of biodegradable polymers and α-amino acids for the development of a polymeric implantable drug delivery carrier. The cyto- and genotoxicity of the synthesized matrices were evaluated using a bacterial luminescence test, protozoan assay, and Salmonella typhimurium TA1535. A new urethane bond was formed between the hydroxyl end-groups of the synthesized polymer matrices and an amine group of prazosin, using 1,1'-carbonyldiimidazole (CDI) as a coupling agent. The structure of the polymeric conjugates was characterized by various spectroscopy techniques. A study of hydrogen nuclear magnetic resonance ((1)H-NMR) and differential scanning calorimetry (DSC) thermodiagrams indicated that the presence of prazosin pendant groups in the macromolecule structures increased the polymer's rigidity alongside increasing glass transition temperature. It has been found that the kinetic release of prazosin from the obtained macromolecular conjugates, tested in vitro under different conditions, is strongly dependent on the physicochemical properties of polymeric matrices. Furthermore, the presence of a urethane bond in the macromolecular conjugates allowed for obtaining a relatively controlled release profile of the drug. The obtained results confirm that the pharmacokinetics of prazosin might be improved through the synthesis of polymeric conjugates containing biomedical polymers and α-amino acids in the macromolecule.


Asunto(s)
Aminoácidos/química , Sistemas de Liberación de Medicamentos/métodos , Poliésteres/química , Prazosina/análogos & derivados , Prazosina/química , Antagonistas de Receptores Adrenérgicos alfa 1/síntesis química , Antagonistas de Receptores Adrenérgicos alfa 1/química , Aliivibrio fischeri/efectos de los fármacos , Antihipertensivos/síntesis química , Antihipertensivos/química , Arginina/química , Rastreo Diferencial de Calorimetría , Caproatos/química , Cilióforos/efectos de los fármacos , Citrulina/química , Imidazoles/química , Lactonas/química , Espectroscopía de Resonancia Magnética , Resonancia Magnética Nuclear Biomolecular , Prazosina/síntesis química , Prazosina/farmacología
13.
PLoS Genet ; 6(4): e1000927, 2010 Apr 29.
Artículo en Inglés | MEDLINE | ID: mdl-20442873

RESUMEN

Large fractions of eukaryotic genomes contain repetitive sequences of which the vast majority is derived from transposable elements (TEs). In order to inactivate those potentially harmful elements, host organisms silence TEs via methylation of transposon DNA and packaging into chromatin associated with repressive histone marks. The contribution of individual histone modifications in this process is not completely resolved. Therefore, we aimed to define the role of reversible histone acetylation, a modification commonly associated with transcriptional activity, in transcriptional regulation of murine TEs. We surveyed histone acetylation patterns and expression levels of ten different murine TEs in mouse fibroblasts with altered histone acetylation levels, which was achieved via chemical HDAC inhibition with trichostatin A (TSA), or genetic inactivation of the major deacetylase HDAC1. We found that one LTR retrotransposon family encompassing virus-like 30S elements (VL30) showed significant histone H3 hyperacetylation and strong transcriptional activation in response to TSA treatment. Analysis of VL30 transcripts revealed that increased VL30 transcription is due to enhanced expression of a limited number of genomic elements, with one locus being particularly responsive to HDAC inhibition. Importantly, transcriptional induction of VL30 was entirely dependent on the activation of MAP kinase pathways, resulting in serine 10 phosphorylation at histone H3. Stimulation of MAP kinase cascades together with HDAC inhibition led to simultaneous phosphorylation and acetylation (phosphoacetylation) of histone H3 at the VL30 regulatory region. The presence of the phosphoacetylation mark at VL30 LTRs was linked with full transcriptional activation of the mobile element. Our data indicate that the activity of different TEs is controlled by distinct chromatin modifications. We show that activation of a specific mobile element is linked to a dual epigenetic mark and propose a model whereby phosphoacetylation of histone H3 is crucial for full transcriptional activation of VL30 elements.


Asunto(s)
Epigénesis Genética , Regulación de la Expresión Génica , Histonas/metabolismo , Retroelementos/genética , Acetilación , Animales , Cromatina , Embrión de Mamíferos/metabolismo , Histona Desacetilasas/genética , Histona Desacetilasas/metabolismo , Ratones , Fosforilación
14.
Acta Bioeng Biomech ; 24(3): 91-97, 2022.
Artículo en Inglés | MEDLINE | ID: mdl-38314469

RESUMEN

The purpose of the study was to investigate the influence of additional tactile information (light fingertip touch) on the postural sway and regularity of center-of-pressure (COP) fluctuations. Thirty-two young, healthy participants performed a quiet standing task (30 s) on a force platform with and without light fingertip touch. COP time-series were analyzed using standard postural sway measures (range, root mean square error, velocity), COP regularity was measured with Sample entropy. Participants demonstrated significantly smaller postural sway with a light touch, but only in the anteroposterior direction. The amount of sway with additional tactile information in the sagittal plane reached the level of sway in the frontal plane without this information. Similarly, COP fluctuations were more irregular during light touch condition only in the anteroposterior direction, as evidenced by significantly higher Sample entropy. Furthermore, COP regularity decreased in the sagittal plane and reached level in the frontal plane without light touch. These results suggest that postural sway is mostly controlled in the sagittal plane and that in the mediolateral direction the control is mostly automated. In conclusion, our results support the notion that the light touch provides additional information which enhances postural stabilization. Our results expand the relation between COP regularity and the attention invested in posture in the touch domain and prove that light touch, as an attentional demanding task, leads to increased COP irregularity. Nonlinear measures of signal regularity (i.e., SampEn) provide surplus insight into human postural control and can be used as an additional useful tool to traditional balance measures.

15.
Vet Microbiol ; 266: 109362, 2022 Mar.
Artículo en Inglés | MEDLINE | ID: mdl-35144043

RESUMEN

Mycoplasma anserisalpingitidis infection is associated with the inflammation of the genital tract and cloaca, embryo lethality and decreased egg production in geese, leading to serious economic losses. This bacterium has so far been described in Europe and Asia. There is no commercially available vaccine against M. anserisalpingitidis, thus treatment of waterfowl mycoplasmosis relies mainly on antimicrobial therapy. However, M. anserisalpingitidis isolates with decreased susceptibility to macrolides and lincomycin have been reported before. The minimal inhibitory concentration (MIC) values of tilmicosin, tylosin, tylvalosin and lincomycin were determined against 82 M. anserisalpingitidis isolates originating from Hungary, Poland, China and Vietnam. Whole-genome sequence analyses revealed two mutations in the 23S rRNA coding regions and one mutation in the 50S ribosomal protein L22 coding gene possibly correlating with decreased susceptibility to the examined antibiotics. Mismatch amplification mutation assays coupled with melt analysis (melt-MAMAs) were designed to detect the nucleotide substitutions. This study is the first to describe resistance-related mutations in the goose pathogen M. anserisalpingitidis. The developed molecular assays support targeted antibiotic usage, hence their use may help to reduce the development and spread of antibiotic resistance.


Asunto(s)
Infecciones por Mycoplasma , Mycoplasma , Animales , Antibacterianos/farmacología , Farmacorresistencia Bacteriana/genética , Lincomicina/farmacología , Macrólidos/farmacología , Pruebas de Sensibilidad Microbiana/veterinaria , Mutación , Mycoplasma/genética , Infecciones por Mycoplasma/microbiología , Infecciones por Mycoplasma/veterinaria
16.
J Biol Chem ; 285(52): 41062-73, 2010 Dec 24.
Artículo en Inglés | MEDLINE | ID: mdl-20952396

RESUMEN

Histone deacetylase inhibitors induce cell cycle arrest and apoptosis in tumor cells and are, therefore, promising anti-cancer drugs. The cyclin-dependent kinase inhibitor p21 is activated in histone deacetylase (HDAC) inhibitor-treated tumor cells, and its growth-inhibitory function contributes to the anti-tumorigenic effect of HDAC inhibitors. We show here that induction of p21 by trichostatin A involves MAP kinase signaling. Activation of the MAP kinase signaling pathway by growth factors or stress signals results in histone H3 serine 10 phosphorylation at the p21 promoter and is crucial for acetylation of the neighboring lysine 14 and recruitment of activated RNA polymerase II in response to trichostatin A treatment. In non-induced cells, the protein phosphatase PP2A is associated with the p21 gene and counteracts its activation. Induction of p21 is linked to simultaneous acetylation and phosphorylation of histone H3. The dual modification mark H3S10phK14ac at the activated p21 promoter is recognized by the phospho-binding protein 14-3-3ζ, which protects the phosphoacetylation mark from being processed by PP2A. Taken together we have revealed a cross-talk of reversible phosphorylation and acetylation signals that controls the activation of p21 by HDAC inhibitors and identify the phosphatase PP2A as chromatin-associated transcriptional repressor in mammalian cells.


Asunto(s)
Inhibidor p21 de las Quinasas Dependientes de la Ciclina/metabolismo , Inhibidores de Histona Desacetilasas/farmacología , Ácidos Hidroxámicos/farmacología , Sistema de Señalización de MAP Quinasas/efectos de los fármacos , Transcripción Genética/efectos de los fármacos , Activación Transcripcional/efectos de los fármacos , Proteínas 14-3-3/genética , Proteínas 14-3-3/metabolismo , Acetilación/efectos de los fármacos , Animales , Inhibidor p21 de las Quinasas Dependientes de la Ciclina/genética , Histonas/genética , Histonas/metabolismo , Sistema de Señalización de MAP Quinasas/fisiología , Ratones , Fosforilación/efectos de los fármacos , Fosforilación/fisiología , ARN Polimerasa II/genética , ARN Polimerasa II/metabolismo , Células 3T3 Swiss , Transcripción Genética/fisiología , Activación Transcripcional/fisiología
17.
Handb Exp Pharmacol ; 206: 13-37, 2011.
Artículo en Inglés | MEDLINE | ID: mdl-21879444

RESUMEN

Traditionally, cancer has been regarded to originate from genetic alterations such as mutations, deletions, rearrangements as well as gene amplifications, leading to abnormal expression of tumor suppressor genes and oncogenes. An increasing body of evidence indicates that in addition to changes in DNA sequence, epigenetic alterations contribute to cancer initiation and progression. In contrast to genetic mutations, epigenetic changes are reversible and therefore an attractive target for cancer therapy. Many epi-drugs such as histone deacetylase (HDAC) inhibitors showed anticancer activity in cell culture and animal models of carcinogenesis. Recently, the two HDAC inhibitors suberoylanilide hydroxamic acid (SAHA, Vorinostat) and Romidepsin (Depsipeptide, FK228) were FDA approved for the treatment of cutaneous T-cell lymphoma (CTCL). Although HDAC inhibitors are potent anticancer agents, these compounds act against several HDAC family members potentially resulting in numerous side effects. This stems from the fact that HDACs play crucial roles in a variety of biological processes including cell cycle progression, proliferation, differentiation, and development. Consistently, mice deficient in single HDACs mostly exhibit severe phenotypes. Therefore, it is necessary to specify the cancer-relevant HDACs in a given tumor type in order to design selective inhibitors that target only cancer cells without affecting normal cells. In this chapter, we summarize the current state of knowledge of individual nuclear HDAC family members in development and tumorigenesis, their contribution to the hallmarks of cancer, and the involvement of HDAC family members in different types of human malignancies.


Asunto(s)
Núcleo Celular/enzimología , Epigénesis Genética , Histona Desacetilasas/metabolismo , Neoplasias/enzimología , Animales , Antineoplásicos/uso terapéutico , Núcleo Celular/efectos de los fármacos , Epigénesis Genética/efectos de los fármacos , Regulación Neoplásica de la Expresión Génica , Inhibidores de Histona Desacetilasas/uso terapéutico , Histona Desacetilasas/genética , Humanos , Neoplasias/tratamiento farmacológico , Neoplasias/genética , Neoplasias/patología
18.
Vet Microbiol ; 254: 108972, 2021 Mar.
Artículo en Inglés | MEDLINE | ID: mdl-33422690

RESUMEN

Mycoplasma anserisalpingitidis infection is associated with the inflammation of the genital tract and cloaca, embryo lethality, and decreased egg production in geese, leading to serious economic losses. M. anserisalpingitidis has been detected mainly in Central and Eastern Europe, especially in Hungary, but the pathogen was identified recently in China, predicting it's worldwide occurrence. In this study, a novel multilocus sequence typing (MLST) scheme was developed to analyse phylogenetic relationships between M. anserisalpingitidis field isolates and clinical specimens originating from different geographical locations. Five loci (atpG, fusA, pgiB, plsY, and uvrA) were selected for the final MLST study. The examined 89 M. anserisalpingitidis samples yielded 76 unique sequence types with a 0.994 Simpson's index of diversity. The samples were originated from Hungary, Poland, Ukraine, China, and Vietnam. Phylogenetic analysis revealed the existence of three distinct clades (A-C) and six subclades within clade C. Generally, samples originating from the same geographical locations or livestock integration clustered together. Isolates in clade A showed the closest relationships to the M. anatis outgroup due to sequence similarity of the plsY locus. The highest genetic distance was observed in 5C among the subclades of clade C, containing the Asian and some Hungarian field isolates. The developed MLST assay revealed high diversity of the investigated M. anserisalpingitidis samples. The method proved to be a valuable and cost-effective tool for sequence typing of this waterfowl Mycoplasma species, enabling the better understanding of its phylogeny and providing a robust assay for future molecular epidemiological investigations.


Asunto(s)
Gansos/microbiología , Genotipo , Tipificación de Secuencias Multilocus/métodos , Infecciones por Mycoplasma/veterinaria , Mycoplasma/clasificación , Mycoplasma/genética , Animales , Enfermedades de las Aves/microbiología , China , ADN Bacteriano/genética , Variación Genética , Técnicas de Genotipaje/métodos , Hungría , Tipificación de Secuencias Multilocus/economía , Mycoplasma/patogenicidad , Infecciones por Mycoplasma/microbiología , Filogenia , Polonia , Enfermedades de las Aves de Corral/microbiología , Vietnam
19.
Pediatr Transplant ; 14(5): 629-35, 2010 Aug.
Artículo en Inglés | MEDLINE | ID: mdl-20158667

RESUMEN

EBV loads and abnormalities of humoral responses were monitored in 51 pediatric liver transplant recipients as a proposed non-invasive laboratory tool for early detection of changes preceding severe clinical complications. EBV DNA load, concentrations of IgM, IgG, IgA, and monoclonal proteins were determined in each blood sample. EBV DNA was detected in 70.6% of the children, dysgammaglobulinemia of one or more Ig isotype was present in 41.2% of them. MG detected in 43.1% of patients correlated with the presence of EBV DNA (p = 0.003) and was usually preceded by hypergammaglobulinemia. The median maximum EBV load was significantly higher in EBV DNA+/MG+ patients than in EBV DNA+/MG- patients (p = 0.04), although there was no correlation between current viral load and appearance of MG. Four of 15 EBV DNA-negative patients developed MG, preceded by hypergammaglobulinemia in two. Minimization or cessation of immunosuppression in 42 patients, in whom abnormal biomarkers and/or clinical symptoms raised suspicion of disease progression, permitted complete resolution of abnormalities in all but one patient who developed B-NHL and died. Simultaneous monitoring of protein profiles and EBV DNA load together with thorough physical evaluation of children after LTx is important for early implementation of suitable preemptive therapy.


Asunto(s)
ADN Viral , Infecciones por Virus de Epstein-Barr/virología , Hepatopatías/cirugía , Trasplante de Hígado , Trastornos Linfoproliferativos/virología , Carga Viral , Adolescente , Niño , Preescolar , Femenino , Humanos , Lactante , Masculino , Neoplasias
20.
PLoS One ; 15(4): e0231545, 2020.
Artículo en Inglés | MEDLINE | ID: mdl-32298318

RESUMEN

Mycoplasma gallisepticum is one of the most important poultry pathogens that can also infect wild birds, but knowledge of potential non-poultry hosts that could be reservoirs of M. gallisepticum is limited. For the paper presented here, we screened three databases (PubMed, Scopus, and the Web of Knowledge) to find articles on the occurrence of M. gallisepticum in different wild bird species that were published between 1951 and 2018. Among 314 studies found, we selected and included 50 original articles that met the pre-established criteria. From those publications we extracted the following information: name of the first author, year of publication, year of sample isolation, country, region, number of birds sampled, number of birds tested by each method, number of positive samples, diagnostic criteria, and if birds were wild or captive. Because different detection techniques were used to confirm the presence of M. gallisepticum in one animal, we decided to perform the meta analyses separately for each method. The estimated prevalence of M. gallisepticum in wild birds was different by each method of detection. Our summary revealed that M. gallisepticum was present in 56 species of bird belonging to 11 different orders, of which 21 species were reported suffering both past and current infection. Our work provides information on wild bird species that could be considered potential reservoirs or carriers of M. gallisepticum and could be helpful to set the direction for future research on the spread and phylogeny of M. gallisepticum in different hosts.


Asunto(s)
Animales Salvajes/microbiología , Enfermedades de las Aves/epidemiología , Infecciones por Mycoplasma/veterinaria , Mycoplasma gallisepticum , Animales , Enfermedades de las Aves/microbiología , Aves/microbiología , Infecciones por Mycoplasma/epidemiología , Prevalencia
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