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1.
Sensors (Basel) ; 23(23)2023 Dec 03.
Artículo en Inglés | MEDLINE | ID: mdl-38067960

RESUMEN

Eye gaze can be a potentially fast and ergonomic method for target selection in augmented reality (AR). However, the eye-tracking accuracy of current consumer-level AR systems is limited. While state-of-the-art AR target selection techniques based on eye gaze and touch (gaze-touch), which follow the "eye gaze pre-selects, touch refines and confirms" mechanism, can significantly enhance selection accuracy, their selection speeds are usually compromised. To balance accuracy and speed in gaze-touch grid menu selection in AR, we propose the Hand-Held Sub-Menu (HHSM) technique.tou HHSM divides a grid menu into several sub-menus and maps the sub-menu pointed to by eye gaze onto the touchscreen of a hand-held device. To select a target item, the user first selects the sub-menu containing it via eye gaze and then confirms the selection on the touchscreen via a single touch action. We derived the HHSM technique's design space and investigated it through a series of empirical studies. Through an empirical study involving 24 participants recruited from a local university, we found that HHSM can effectively balance accuracy and speed in gaze-touch grid menu selection in AR. The error rate was approximately 2%, and the completion time per selection was around 0.93 s when participants used two thumbs to interact with the touchscreen, and approximately 1.1 s when they used only one finger.


Asunto(s)
Realidad Aumentada , Humanos , Interfaz Usuario-Computador , Fijación Ocular , Ergonomía , Sistemas de Computación
2.
J Immunol ; 205(7): 1752-1762, 2020 10 01.
Artículo en Inglés | MEDLINE | ID: mdl-32868411

RESUMEN

P2X7 receptor (P2X7R) is highly expressed on immune cells, triggering the release of cytokines and regulating autoimmune responses. To investigate P2X7R surface expression on T helper (Th) 1, Th17, and regulatory T (Treg) cells in patients with systemic lupus erythematosus (SLE) or rheumatoid arthritis (RA) and correlations with disease activity, 29 SLE and 29 RA patients and 18 healthy controls (HCs) were enrolled. We showed that SLE and RA patients had significantly higher levels of plasma cytokines (IFN-γ, IL-1ß, IL-6, IL-17A, and IL-23), frequencies of Th1 and Th17 cells, and expression of P2X7R on Th1 and Th17 than HCs, and the Th17/Treg ratio was significantly increased, whereas Treg cell levels were significantly decreased. The Ca2+ influx increase following BzATP stimulation was significantly higher in CD4+PBMCs from SLE and RA patients than in HCs. Blood levels of shed P2X7R were increased in SLE and RA patients. Furthermore, 28-joint Disease Activity Score and SLE Disease Activity Index score showed negative correlations with Treg cell levels and positive correlations with Th17/Treg ratio and Th17 cell P2X7R expression. Interestingly, Th17 cell P2X7R expression was closely correlated with IL-1ß, C-reactive protein, the erythrocyte sedimentation rate, anticyclic citrullinated peptide Abs, albumin, and C4. These data indicate that increased Th17 cell P2X7R expression is functionally and positively related to disease activity and some inflammatory mediators in SLE and RA patients, and P2X7R could be critical in promoting the Th17 immune response and contributing to the complex pathogenesis of SLE and RA.


Asunto(s)
Artritis Reumatoide/inmunología , Lupus Eritematoso Sistémico/inmunología , Receptores Purinérgicos P2X7/metabolismo , Linfocitos T Reguladores/inmunología , Células TH1/inmunología , Células Th17/inmunología , Enfermedad Aguda , Adulto , Anciano , Progresión de la Enfermedad , Femenino , Regulación de la Expresión Génica , Humanos , Masculino , Persona de Mediana Edad , Receptores Purinérgicos P2X7/genética
3.
Ecotoxicol Environ Saf ; 213: 112065, 2021 Apr 15.
Artículo en Inglés | MEDLINE | ID: mdl-33636464

RESUMEN

Listeria monocytogenes widely exists in the natural environment and does great harm, which can cause worldwide public safety problem. Infection with L. monocytogenes can cause rapid death of Kupffer cell (KCs) in liver tissue and liver damage. American ginseng saponins is a natural compound in plants, which has great potential in inhibiting L. monocytogenes infection. Therefore, American ginseng stem-leaf saponins (AGS) and American ginseng heat-transformed saponins (HTS) were used as raw materials to study their bacteriostatic experiments in vivo and in vitro. In this experiment, female Kunming mice were randomly divided into five groups: control group, negative group, AGS group, HTS group (10 mg/kg/day in an equal volume via gastric administration) and penicillin group, each group containing six mice. Profiles AGS and HTS components were evaluated by high-performance liquid chromatography (HPLC) analysis. The bacteriostatic effect of AGS and HTS on L. monocytogenes was evaluated by inhibition zone test, minimum inhibitory concentration (MIC) and minimum bactericidal concentration (MBC). The bacteriostatic effect of AGS and HTS pretreatment on mice infected with L. monocytogenes were studies by animal experimental. The results showed that the content of polar saponins in AGS was 0.81 ± 0.003 mg/mg, less polar saponins was 0.08 ± 0.02 mg/mg, the content of polar saponins in HTS was 0.10 ± 0.01 mg/mg, less polar saponins was 0.76 ± 0.02 mg/mg. The in vitro bacteriostatic diameter of HTS (16.6 ± 0.8 mm) is large than that of AGS (10.2 ± 1.2 mm). AGS and HTS pretreatment could reduce the colony numbers in the livers of mice infected with Listeria monocytogenes. The levels of alanine aminotransferase (ALT), IL-1ß, IL-6, TNF-α and IFN-γ in the livers of mice in the pretreatment group were significantly lower than those in the negative group. There were obvious leukoplakia, calcification and other liver damage on the liver surface in the negative control group, and obvious inflammatory cell infiltration in HE sections. AGS and HTS pretreatment can reduce liver injury caused by L. monocytogenes and protect the liver. Compared with AGS, HTS has higher content of less polar saponins and better bacteriostatic effect in vitro. The count of bacterial in liver tissue of HTS group was significantly lower, the survival rate was significantly higher than that of AGS group. Less polar saponins had better bacteriostatic effect. Collectively, less polar saponins pretreatment has a protective effect on mice infected with L. monocytogenes, to which alleviated liver damage, improved anti-inflammatory ability and immunity of the body, protected liver may contribute.


Asunto(s)
Ginsenósidos/toxicidad , Listeria monocytogenes/efectos de los fármacos , Animales , Femenino , Listeriosis/inmunología , Listeriosis/metabolismo , Listeriosis/microbiología , Listeriosis/veterinaria , Hígado/metabolismo , Ratones , Pruebas de Sensibilidad Microbiana , Estómago , Factor de Necrosis Tumoral alfa
4.
Bioprocess Biosyst Eng ; 43(3): 429-437, 2020 Mar.
Artículo en Inglés | MEDLINE | ID: mdl-31679050

RESUMEN

This study introduces an effective method to deposit polypyrrole (PPy) on graphite felt (GF) as anode to improve the start-up performance of microbial fuel cells (MFCs). The results of scanning electron microscope (SEM) and electrochemical testing reveal that polypyrrole is able to improve the electrical conductivity and surface roughness, which is beneficial to the microorganism attachment and growth. It shows that microorganisms grow faster on polypyrrole-modified anode than on unmodified anode. It takes ca. 5 days for polypyrrole-modified anode to reach a reproducible voltage platform, while it takes 11 days for unmodified anode. Moreover, the maximum power density of microbial fuel cells with polypyrrole-modified anode was 919 mW m-2, which were 2.3 times of that with unmodified anode. This research revealed that polypyrrole modification can improve the start-up performance of microbial fuel cells. It is considered as a feasible, economical and sustainable anode.


Asunto(s)
Fuentes de Energía Bioeléctrica , Conductividad Eléctrica , Grafito/química , Polímeros/química , Pirroles/química , Electrodos
5.
Mol Cell Biochem ; 443(1-2): 139-149, 2018 Jun.
Artículo en Inglés | MEDLINE | ID: mdl-29094237

RESUMEN

In human esophageal squamous cell carcinoma (ESCC), miR-34a was downregulated and could inhibit in vitro cell proliferation and migration. However, the underlying mechanism was not clear yet. The expression levels of mRNA and protein were detected by quantitative real-time PCR or western blotting, respectively. MiR-34a was knocked down or overexpressed and transfected into human ESCC cell lines ECA109 and TE-13, respectively. Cell migration and wound healing assays were used to examine the effect on migration and invasion in vitro. Animal models were used to examine the role of miR-34a in metastasis in vivo. Luciferase assay was carried out to validate the potential target of miR-34a. CD44 was upregulated and miR-34a was downregulated in ESCC tissues and cell lines. The linear regression analysis showed that CD44 expression was negatively correlated with the level of miR-34a. Luciferase assay showed that miR-34a interacted with a putative binding site in the CD44 3'UTR. MiR-34a was found to negatively regulate the expression of CD44. In vitro experiment showed that miR-34a overexpression inhibited ESCC cell invasion and migration; whereas miR-34a knockdown showed reversed results. MiR-34a also inhibited esophagus tumor growth and metastasis in vivo; whereas miR-34a knockdown showed reversed results. Finally, we found that CD44 knockdown reversed the effects of miR-34a knockdown on ESCC cell invasion and migration in vitro. MiRNA-34a suppresses invasion and metastatic in ESCC by regulating CD44.


Asunto(s)
Carcinoma de Células Escamosas/metabolismo , Neoplasias Esofágicas/metabolismo , Receptores de Hialuranos/metabolismo , MicroARNs/metabolismo , Proteínas de Neoplasias/metabolismo , ARN Neoplásico/metabolismo , Animales , Carcinoma de Células Escamosas/genética , Carcinoma de Células Escamosas/patología , Neoplasias Esofágicas/genética , Neoplasias Esofágicas/patología , Carcinoma de Células Escamosas de Esófago , Femenino , Humanos , Receptores de Hialuranos/genética , Masculino , Ratones , Ratones Desnudos , MicroARNs/genética , Invasividad Neoplásica , Metástasis de la Neoplasia , Proteínas de Neoplasias/genética , ARN Neoplásico/genética
6.
Water Sci Technol ; 71(5): 754-60, 2015.
Artículo en Inglés | MEDLINE | ID: mdl-25768223

RESUMEN

A novel bioelectrochemical system (BES) was designed to recover copper and nickel from wastewater sequentially. The BES has two chambers separated by a bipolar membrane and two cathodes. Firstly, the copper ions were reduced on a graphite cathode with electricity output, and then with an additional bias-potential applied, the nickel ions were recovered sequentially on a copper sheet with electricity input. In this design, nickel and copper can be recovered and separated sequentially on two cathodes. By adjusting the molar ratio of copper and nickel ions to 2.99:1 in wastewater, 1.40 mmol Cu²âº could be recovered with 143.78 J electricity outputs, while 50.68 J electricity was input for 0.32 mmol nickel reduction. The total energy output of copper recovery was far more than the electricity input of nickel reduction. The present technology provides a potential method for heavy metal ion separation and recovery.


Asunto(s)
Cobre/aislamiento & purificación , Níquel/aislamiento & purificación , Eliminación de Residuos Líquidos/métodos , Cationes , Electricidad , Técnicas Electroquímicas/instrumentación , Electrodos , Eliminación de Residuos Líquidos/instrumentación , Aguas Residuales/química , Contaminantes Químicos del Agua/aislamiento & purificación
7.
Biomarkers ; 19(5): 402-6, 2014 Aug.
Artículo en Inglés | MEDLINE | ID: mdl-24857385

RESUMEN

CONTEXT: Nesfatin-1 is implicated to possess an anti-inflammatory effect. OBJECTIVE: The aim of our study is to investigate whether abnormal serum levels of nesfatin-1 are associated with the presence and severity of preeclampsia. METHODS: A total of 120 women with preeclampsia and 92 women with uncomplicated pregnancies were enrolled in this study. RESULTS: Women with preeclampsia showed significantly reduced levels of serum nesfatin-1 levels than women with uncomplicated pregnancies. Serum nesfatin-1 levels were significantly decreased in women with severe preeclampsia compared with women with mild preeclampsia. CONCLUSION: Decreased serum nesfatin-1 levels are associated with the presence and severity of preeclampsia.


Asunto(s)
Proteínas de Unión al Calcio/sangre , Proteínas de Unión al ADN/sangre , Proteínas del Tejido Nervioso/sangre , Preeclampsia/sangre , Adulto , Presión Sanguínea , Diagnóstico Diferencial , Femenino , Humanos , Resistencia a la Insulina , Modelos Lineales , Nucleobindinas , Preeclampsia/diagnóstico , Preeclampsia/fisiopatología , Embarazo , Índice de Severidad de la Enfermedad , Triglicéridos/sangre
8.
Parasitol Res ; 113(5): 1769-73, 2014 May.
Artículo en Inglés | MEDLINE | ID: mdl-24609234

RESUMEN

Artemisinin, also known as qinghaosu, is a sesquiterpene lactone endoperoxide extracted from the plant Artemisia annua L, an herb employed in traditional Chinese medicine. Artemisinin and its two main derivatives artemether and artesunate have been shown to be effective against both malaria and schistosomiasis, and therefore, they were described by Liu et al (Parasitol Res 110:2071-2074, 2012b) as the gifts from traditional Chinese medicine not only for malaria control but also for schistosomiasis control. However, another artemisinin derivative dihydroartemisinin (DHA) cannot be neglected. Dihydroartemisinin, a derivative of artemisinin with the C-10 lactone group replaced by hemiacetal and the active metabolite of all artemisinin compounds, was firstly identified as an antimalarial agent, and the dihydroartemisinin-piperaquine combination has been recommended as a first-line treatment of uncomplicated Plasmodium falciparum malaria by the WHO. It has been recently found that administration of dihydroartemisinin at a single dose of 300 mg/kg 2 h or 3, 5, 7, 10, 14, 18, 21, 28, or 35 days post-infection reduces total worm burdens by 1.1-64.8% and female worm burden reductions by 11.9-90.5%, and the in vivo activity of dihydroartemisinin against S. japonicum is enhanced by the use of multiple doses. However, a combination of praziquantel and dihydroartemisinin appears no more effective against S. japonicum schistosomulum than treatment with dihydroartemisinin alone. In mice experimentally infected with S. mansoni, administration with dihydroartemisinin at a single dose of 300 mg/kg on days 1, 7, 14, 21, 28, 35, 42, 49, or 56 post-infection results in total worm burden reductions of 13.8-82.1% and female worm burden reductions of 13-82.8%, and a clear-cut dose-response relationship of dihydroartemisinin against the schistosomula and adult worms of S. mansoni is observed. In addition, dihydroartemisinin was found to cause damages to the reproductive system of female S. mansoni worms, reduce the oviposition of survival worms, and inhibit the formation of granulomas around tissue-trapped eggs. More interestingly, no reduced sensitivity to dihydroartemisinin is detected in praziquantel non-susceptible S. japonicum, which provides a new option for the treatment of S. japonicum and S. mansoni infections, notably in endemic foci with praziquantel resistance or insensitivity detected. It is therefore considered that dihydroartemisinin is another gift from the traditional Chinese medicine not only for malaria control but also for schistosomiasis control.


Asunto(s)
Artemisininas/farmacología , Medicamentos Herbarios Chinos/farmacología , Esquistosomicidas/farmacología , Animales , Antimaláricos/farmacología , Arteméter , Artesunato , Femenino , Malaria Falciparum/tratamiento farmacológico , Ratones , Praziquantel/farmacología , Esquistosomiasis Japónica/tratamiento farmacológico
9.
Parasitol Res ; 113(1): 239-41, 2014 Jan.
Artículo en Inglés | MEDLINE | ID: mdl-24146209

RESUMEN

Currently, praziquantel is the drug of choice for the treatment of human Schistosoma mansoni infections. It has not been proved until now that there is real praziquantel resistance, but there is decreased praziquantel sensitivity. A search for novel antischistosomal agents against the parasite has been given a high priority. Dihydroartemisinin, formerly identified as an antimalarial drug, has been shown to be active against both Schistosoma japonicum and S. mansoni in mice. Interestingly, dihydroartemisinin is found to be highly effective against the 14-28-day schistosomula of S. mansoni, and treatment with multiple low doses of the drug achieves a high efficacy with reduced toxicity to the host. The long time development from juveniles to adults allows adequate timing for treatment of this neglected tropical disease. It is supposed that dihydroartemisinin, a safe orally administered agent, may be used for the prevention and control of human S. mansoni infections, notably in areas with reduced praziquantel sensitivity or praziquantel resistance detected.


Asunto(s)
Artemisininas/uso terapéutico , Esquistosomiasis mansoni/tratamiento farmacológico , Esquistosomicidas/uso terapéutico , Animales , Femenino , Ratones , Praziquantel/uso terapéutico , Schistosoma mansoni/efectos de los fármacos
10.
IEEE Trans Vis Comput Graph ; 30(1): 447-457, 2024 Jan.
Artículo en Inglés | MEDLINE | ID: mdl-37883270

RESUMEN

To facilitate the reuse of existing charts, previous research has examined how to obtain a semantic understanding of a chart by deconstructing its visual representation into reusable components, such as encodings. However, existing deconstruction approaches primarily focus on chart styles, handling only basic layouts. In this paper, we investigate how to deconstruct chart layouts, focusing on rectangle-based ones, as they cover not only 17 chart types but also advanced layouts (e.g., small multiples, nested layouts). We develop an interactive tool, called Mystique, adopting a mixed-initiative approach to extract the axes and legend, and deconstruct a chart's layout into four semantic components: mark groups, spatial relationships, data encodings, and graphical constraints. Mystique employs a wizard interface that guides chart authors through a series of steps to specify how the deconstructed components map to their own data. On 150 rectangle-based SVG charts, Mystique achieves above 85% accuracy for axis and legend extraction and 96% accuracy for layout deconstruction. In a chart reproduction study, participants could easily reuse existing charts on new datasets. We discuss the current limitations of Mystique and future research directions.

11.
IEEE Trans Vis Comput Graph ; 30(1): 825-835, 2024 Jan.
Artículo en Inglés | MEDLINE | ID: mdl-37883272

RESUMEN

Line-based density plots are used to reduce visual clutter in line charts with a multitude of individual lines. However, these traditional density plots are often perceived ambiguously, which obstructs the user's identification of underlying trends in complex datasets. Thus, we propose a novel image space coloring method for line-based density plots that enhances their interpretability. Our method employs color not only to visually communicate data density but also to highlight similar regions in the plot, allowing users to identify and distinguish trends easily. We achieve this by performing hierarchical clustering based on the lines passing through each region and mapping the identified clusters to the hue circle using circular MDS. Additionally, we propose a heuristic approach to assign each line to the most probable cluster, enabling users to analyze density and individual lines. We motivate our method by conducting a small-scale user study, demonstrating the effectiveness of our method using synthetic and real-world datasets, and providing an interactive online tool for generating colored line-based density plots.

12.
Sci Total Environ ; 928: 172597, 2024 Jun 10.
Artículo en Inglés | MEDLINE | ID: mdl-38642753

RESUMEN

Solar-driven interfacial water purification emerges as a sustainable technology for seawater desalination and wastewater treatment to address the challenge of water scarcity. Currently, the energy losses via radiation and convection to surrounding environment minimize its energy efficiency. Therefore, it is necessary to develop strategies to minimize the heat losses for efficient water purification. Here, a novel evaporator was developed through the in situ gelation of PAM hydrogel on the surface carbonized hydroponic bamboo (PSC) to promote energy efficiency. The inherent porous and layered network structures of bamboo, in synergy with the functional hydration capacity of PAM hydrogel, facilitated adequate water transportation, while reducing evaporation enthalpy. The PAM hydrogel firmly covered on the photothermal layer surface effectively minimized the radiation and convection heat losses, while further harvesting those thermal energy that would otherwise dissipate into the surrounding environment. The reduced thermal conductivity of PSC served as a thermal insulator as well, obstructing heat transfer to bulk water and thus diminishing conduction losses. Consequently, the rational designed PSC could efficiently convert solar energy to purified water, leading to the evaporation of 2.09 kg m-2 h-1, the energy efficiency of 87.6 % under one sun irradiation, and yielding 9.6 kg m-2 fresh water over 11 h outdoor operation. Moreover, the PSC also performs excellent salt rejection, and long-term stability at outdoor experiment. These results demonstrated high and stable solar evaporation performance could be achieved if turning heat losses into a way of extra energy extraction to further enhance the evaporation performance. This strategy appears to be a promising strategy for effective thermal energy management and practical application.

13.
Comput Biol Med ; 163: 107217, 2023 09.
Artículo en Inglés | MEDLINE | ID: mdl-37450968

RESUMEN

BACKGROUND AND OBJECTIVE: Medical image visualization is an essential tool for conveying anatomical information. Ray-casting-based volume rendering is commonly used for generating visualizations of raw medical images. However, exposing a target area inside the skin often requires manual tuning of transfer functions or segmentation of original images, as preset parameters in volume rendering may not work well for arbitrary scanned data. This process is tedious and unnatural. To address this issue, we propose a volume visualization system that enhances the view inside the skin, enabling flexible exploration of medical volumetric data using virtual reality. METHODS: In our proposed system, we design a virtual reality interface that allows users to walk inside the data. We introduce a view-dependent occlusion weakening method based on geodesic distance transform to support this interaction. By combining these methods, we develop a virtual reality system with intuitive interactions, facilitating online view enhancement for medical data exploration and annotation inside the volume. RESULTS: Our rendering results demonstrate that the proposed occlusion weakening method effectively weakens obstacles while preserving the target area. Furthermore, comparative analysis with other alternative solutions highlights the advantages of our method in virtual reality. We conducted user studies to evaluate our system, including area annotation and line drawing tasks. The results showed that our method with enhanced views achieved 47.73% and 35.29% higher accuracy compared to the group with traditional volume rendering. Additionally, subjective feedback from medical experts further supported the effectiveness of the designed interactions in virtual reality. CONCLUSIONS: We successfully address the occlusion problems in the exploration of medical volumetric data within a virtual reality environment. Our system allows for flexible integration of scanned medical volumes without requiring extensive manual preprocessing. The results of our user studies demonstrate the feasibility and effectiveness of walk-in interaction for medical data exploration.


Asunto(s)
Realidad Virtual , Interfaz Usuario-Computador , Piel
14.
IEEE Trans Vis Comput Graph ; 29(1): 193-202, 2023 Jan.
Artículo en Inglés | MEDLINE | ID: mdl-36166554

RESUMEN

We present SizePairs, a new technique to create stable and balanced treemap layouts that visualize values changing over time in hierarchical data. To achieve an overall high-quality result across all time steps in terms of stability and aspect ratio, SizePairs employs a new hierarchical size-based pairing algorithm that recursively pairs two nodes that complement their size changes over time and have similar sizes. SizePairs maximizes the visual quality and stability by optimizing the splitting orientation of each internal node and flipping leaf nodes, if necessary. We also present a comprehensive comparison of SizePairs against the state-of-the-art treemaps developed for visualizing time-dependent data. SizePairs outperforms existing techniques in both visual quality and stability, while being faster than the local moves technique.

15.
IEEE Trans Vis Comput Graph ; 29(11): 4460-4471, 2023 Nov.
Artículo en Inglés | MEDLINE | ID: mdl-37782602

RESUMEN

With the development of virtual reality, the practical requirements of the wearable haptic interface have been greatly emphasized. While passive haptic devices are commonly used in virtual reality, they lack generality and are difficult to precisely generate continuous force feedback to users. In this work, we present SmartSpring, a new solution for passive haptics, which is inexpensive, lightweight and capable of providing controllable force feedback in virtual reality. We propose a hybrid spring-linkage structure as the proxy and flexibly control the mechanism for adjustable system stiffness. By analyzing the structure and force model, we enable a smart transform of the structure for producing continuous force signals. We quantitatively examine the real-world performance of SmartSpring to verify our model. By asymmetrically moving or actively pressing the end-effector, we show that our design can further support rendering torque and stiffness. Finally, we demonstrate the SmartSpring in a series of scenarios with user studies and a just noticeable difference analysis. Experimental results show the potential of the developed haptic display in virtual reality.

16.
IEEE Trans Vis Comput Graph ; 29(1): 886-895, 2023 Jan.
Artículo en Inglés | MEDLINE | ID: mdl-36166546

RESUMEN

Over the past few decades, a large number of graph layout techniques have been proposed for visualizing graphs from various domains. In this paper, we present a general framework, Taurus, for unifying popular techniques such as the spring-electrical model, stress model, and maxent-stress model. It is based on a unified force representation, which formulates most existing techniques as a combination of quotient-based forces that combine power functions of graph-theoretical and Euclidean distances. This representation enables us to compare the strengths and weaknesses of existing techniques, while facilitating the development of new methods. Based on this, we propose a new balanced stress model (BSM) that is able to layout graphs in superior quality. In addition, we introduce a universal augmented stochastic gradient descent (SGD) optimizer that efficiently finds proper solutions for all layout techniques. To demonstrate the power of our framework, we conduct a comprehensive evaluation of existing techniques on a large number of synthetic and real graphs. We release an open-source package, which facilitates easy comparison of different graph layout methods for any graph input as well as effectively creating customized graph layout techniques.

17.
Artículo en Inglés | MEDLINE | ID: mdl-37021999

RESUMEN

In this paper, we propose the t-FDP model, a force-directed placement method based on a novel bounded short-range force (t-force) defined by Student's t-distribution. Our formulation is flexible, exerts limited repulsive forces for nearby nodes and can be adapted separately in its short- and long-range effects. Using such forces in force-directed graph layouts yields better neighborhood preservation than current methods, while maintaining low stress errors. Our efficient implementation using a Fast Fourier Transform is one order of magnitude faster than state-of-the-art methods and two orders faster on the GPU, enabling us to perform parameter tuning by globally and locally adjusting the t-force in real-time for complex graphs. We demonstrate the quality of our approach by numerical evaluation against state-of-the-art approaches and extensions for interactive exploration.

18.
IEEE Trans Vis Comput Graph ; 29(10): 4256-4268, 2023 Oct.
Artículo en Inglés | MEDLINE | ID: mdl-35786556

RESUMEN

We present Target Netgrams as a visualization technique for radial layouts of graphs. Inspired by manually created target sociograms, we propose an annulus-constrained stress model that aims to position nodes onto the annuli between adjacent circles for indicating their radial hierarchy, while maintaining the network structure (clusters and neighborhoods) and improving readability as much as possible. This is achieved by having more space on the annuli than traditional layout techniques. By adapting stress majorization to this model, the layout is computed as a constrained least square optimization problem. Additional constraints (e.g., parent-child preservation, attribute-based clusters and structure-aware radii) are provided for exploring nodes, edges, and levels of interest. We demonstrate the effectiveness of our method through a comprehensive evaluation, a user study, and a case study.

19.
Artículo en Inglés | MEDLINE | ID: mdl-37294655

RESUMEN

We propose to use optimally ordered orthogonal neighbor-joining (O 3 NJ) trees as a new way to visually explore cluster structures and outliers in multi-dimensional data. Neighbor-joining (NJ) trees are widely used in biology, and their visual representation is similar to that of dendrograms. The core difference to dendrograms, however, is that NJ trees correctly encode distances between data points, resulting in trees with varying edge lengths. We optimize NJ trees for their use in visual analysis in two ways. First, we propose to use a novel leaf sorting algorithm that helps users to better interpret adjacencies and proximities within such a tree. Second, we provide a new method to visually distill the cluster tree from an ordered NJ tree. Numerical evaluation and three case studies illustrate the benefits of this approach for exploring multi-dimensional data in areas such as biology or image analysis.

20.
Syst Rev ; 12(1): 228, 2023 12 08.
Artículo en Inglés | MEDLINE | ID: mdl-38062492

RESUMEN

BACKGROUND: Integrative Chinese and Western medicine (ICWM) is commonly used for the treatment of ulcerative colitis (UC) in clinical practice. However, it is unclear whether the details of ICWM interventions, such as selection rationale, implementation design, and potential interactions, were adequately reported. Therefore, this study aimed to assess the quality of reporting in the ICWM interventional randomized controlled trials (RCTs) of UC and to identify the common problems if any. METHODS: Through a search of 10 international electronic databases, we identified RCTs of UC with ICWM interventions published in English or Chinese from the inception date of each database up to 16 June 2023. Literature screening was strictly conducted based on the inclusion and exclusion criteria of the Population, Concept, and Context (PCC) framework. The general characteristics of the included studies were described. The quality of reporting was assessed according to three checklists, including the CONSORT (Consolidated Standards of Reporting Trials) with 36 items (except for one item 1b about abstract), the CONSORT for Abstracts (17 items), and a self-designed ICWM-related checklist (27 items covering design rationale, intervention details, outcome assessments, and analysis). The reporting scores of RCTs published before and after 2010 were compared. RESULTS: A total of 1458 eligible RCTs were included. For the reporting compliance, the median score (interquartile ranges) of the CONSORT (72 score in total), the CONSORT for Abstract (34 score), and ICWM-related (54 score) items was 21 (18-25), 13 (12-15), and 18 (15-21), respectively. Although the time period comparisons showed that reporting quality of included publications improved significantly after the CONSORT 2010 issued (P < 0.01), more than 50% of items were evaluated as poor quality (reporting rate < 65%) among each checklist, especially in the CONSORT for Abstract and ICWM-specific items. CONCLUSION: Although CONSORT appears to have enhanced the reporting of RCTs in UC, the quality of ICWM specifics is variable and in need of improvement. Reporting guidelines of the ICWM recommendations should be developed to improve their quality.


Asunto(s)
Colitis Ulcerosa , Humanos , Colitis Ulcerosa/terapia , Ensayos Clínicos Controlados Aleatorios como Asunto , Publicaciones , Lista de Verificación , Evaluación de Resultado en la Atención de Salud
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