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1.
Proc Natl Acad Sci U S A ; 121(35): e2400194121, 2024 Aug 27.
Artículo en Inglés | MEDLINE | ID: mdl-39172792

RESUMEN

Size-dependent phagocytosis is a well-characterized phenomenon in monocytes and macrophages. However, this size effect for preferential gene delivery to these important cell targets has not been fully exploited because commonly adopted stabilization methods for electrostatically complexed nucleic acid nanoparticles, such as PEGylation and charge repulsion, typically arrest the vehicle size below 200 nm. Here, we bridge the technical gap in scalable synthesis of larger submicron gene delivery vehicles by electrostatic self-assembly of charged nanoparticles, facilitated by a polymer structurally designed to modulate internanoparticle Coulombic and van der Waals forces. Specifically, our strategy permits controlled assembly of small poly(ß-amino ester)/messenger ribonucleic acid (mRNA) nanoparticles into particles with a size that is kinetically tunable between 200 and 1,000 nm with high colloidal stability in physiological media. We found that assembled particles with an average size of 400 nm safely and most efficiently transfect monocytes following intravenous administration and mediate their differentiation into macrophages in the periphery. When a CpG adjuvant is co-loaded into the particles with an antigen mRNA, the monocytes differentiate into inflammatory dendritic cells and prime adaptive anticancer immunity in the tumor-draining lymph node. This platform technology offers a unique ligand-independent, particle-size-mediated strategy for preferential mRNA delivery and enables therapeutic paradigms via monocyte programming.


Asunto(s)
Monocitos , Nanopartículas , ARN Mensajero , Monocitos/metabolismo , Nanopartículas/química , ARN Mensajero/genética , ARN Mensajero/metabolismo , Animales , Ratones , Humanos , Polielectrolitos/química , Macrófagos/metabolismo , Poliaminas/química , Tamaño de la Partícula , Diferenciación Celular , Técnicas de Transferencia de Gen , Células Dendríticas/metabolismo , Electricidad Estática , Polímeros
2.
Proc Natl Acad Sci U S A ; 119(40): e2204716119, 2022 10 04.
Artículo en Inglés | MEDLINE | ID: mdl-36161929

RESUMEN

Despite pluripotent stem cells sharing key transcription factors, their maintenance involves distinct genetic inputs. Emerging evidence suggests that super-enhancers (SEs) can function as master regulatory hubs to control cell identity and pluripotency in humans and mice. However, whether pluripotency-associated SEs share an evolutionary origin in mammals remains elusive. Here, we performed comprehensive comparative epigenomic and transcription factor binding analyses among pigs, humans, and mice to identify pluripotency-associated SEs. Like typical enhancers, SEs displayed rapid evolution in mammals. We showed that BRD4 is an essential and conserved activator for mammalian pluripotency-associated SEs. Comparative motif enrichment analysis revealed 30 shared transcription factor binding motifs among the three species. The majority of transcriptional factors that bind to identified motifs are known regulators associated with pluripotency. Further, we discovered three pluripotency-associated SEs (SE-SOX2, SE-PIM1, and SE-FGFR1) that displayed remarkable conservation in placental mammals and were sufficient to drive reporter gene expression in a pluripotency-dependent manner. Disruption of these conserved SEs through the CRISPR-Cas9 approach severely impaired stem cell pluripotency. Our study provides insights into the understanding of conserved regulatory mechanisms underlying the maintenance of pluripotency as well as species-specific modulation of the pluripotency-associated regulatory networks in mammals.


Asunto(s)
Elementos de Facilitación Genéticos , Células Madre Pluripotentes , Animales , Proteínas de Ciclo Celular/metabolismo , Elementos de Facilitación Genéticos/genética , Euterios/genética , Femenino , Humanos , Ratones , Proteínas Nucleares/metabolismo , Placenta/metabolismo , Células Madre Pluripotentes/metabolismo , Embarazo , Porcinos , Factores de Transcripción/genética , Factores de Transcripción/metabolismo
3.
J Am Chem Soc ; 146(27): 18451-18458, 2024 Jul 10.
Artículo en Inglés | MEDLINE | ID: mdl-38935866

RESUMEN

Electrocatalytic semihydrogenation of alkynols presents a sustainable alternative to conventional thermal methodologies for the high-value production of alkenols. The design of efficient catalysts with superior catalytic and energy efficiency for semihydrogenation poses a significant challenge. Here, we present the application of an electron-divergent Cu3Pd alloy-based heterojunction in promoting the electrocatalytic semihydrogenation of alkynols to alkenols using water as the proton source. The tunable electron divergence of Cuδ- and Pdδ+, modulated by rectifying contact with nitrogen-rich carbons, enables the concerted binding of active H species from the Volmer step of water dissociation and the C≡C bond of alkynols on Pdδ+ sites. Simultaneously, the pronounced electron divergence of Cu3Pd facilitates the universal adsorption of OH species from the Volmer step and alkynols on the Cuδ- sites. The electron-divergent dual-center substantially boosts water dissociation and inhibition of completing hydrogen evolution to give a turnover frequency of 2412 h-1, outperforming the reported electrocatalysts' value of 7.3. Moreover, the continuous production of alkenols at industrial-related current density (-200 mA cm-2) over the efficient and durable Cu3Pd-based electrolyzer could achieve a cathodic energy efficiency of 45 mol kW·h-1, 1.7 times the bench-marked reactors, promising great potential for sustainable industrial synthesis.

4.
J Exp Bot ; 75(5): 1376-1389, 2024 Feb 28.
Artículo en Inglés | MEDLINE | ID: mdl-37935439

RESUMEN

Genomic imprinting refers to allele-specific expression of genes depending on parental origin, and it is regulated by epigenetic modifications. Intraspecific allelic variation for imprinting has been detected; however, the intraspecific genome-wide allelic epigenetic variation in maize and its correlation with imprinting variants remain unclear. Here, three reciprocal hybrids were generated by crossing Zea mays inbred lines CAU5, B73, and Mo17 in order to examine the intraspecific conservation of the imprinted genes in the kernel. The majority of imprinted genes exhibited intraspecific conservation, and these genes also exhibited interspecific conservation (rice, sorghum, and Arabidopsis) and were enriched in some specific pathways. By comparing intraspecific allelic DNA methylation in the endosperm, we found that nearly 15% of DNA methylation existed as allelic variants. The intraspecific whole-genome correlation between DNA methylation and imprinted genes indicated that DNA methylation variants play an important role in imprinting variants. Disruption of two conserved imprinted genes using CRISPR/Cas9 editing resulted in a smaller kernel phenotype. Our results shed light on the intraspecific correlation of DNA methylation variants and variation for imprinting in maize, and show that imprinted genes play an important role in kernel development.


Asunto(s)
Metilación de ADN , Zea mays , Zea mays/metabolismo , Alelos , Impresión Genómica , Endospermo/genética , Endospermo/metabolismo , Regulación de la Expresión Génica de las Plantas
5.
Microb Pathog ; 196: 106928, 2024 Nov.
Artículo en Inglés | MEDLINE | ID: mdl-39270754

RESUMEN

In recent years, the red swamp crayfish (Procambarus clarkii, P. clarkii) farming industry has suffered huge economic losses due to the pathogenic bacterium Spiroplasma eriocheiris (S. eriocheiris). To elucidate the immune response mechanism and identify hub immune genes as well as their associated microRNAs that regulate the host response of P. clarkii against S. eriocheiris infection, we conducted a comprehensive analysis on P. clarkii hemocyte mRNA and microRNA (miRNA) transcriptomes at different infection stages using third- and second-generation sequencing technologies. In full-length transcriptome functional annotation, 8155 unigenes were annotated, and 1168 potential new transcripts were predicted. In the mRNA transcriptome, a total of 3168 differentially expressed genes were identified at different infection stages, including 1492 upregulated and 1676 downregulated genes (duplicate genes excluded). Transcriptome analysis revealed 880 differentially expressed genes involved in multiple pathways and processes such as endocytosis, autophagy, lysosome, mTOR signaling, phagosome, and the Fanconi anemia pathway. Mfuzz analysis was employed to integrate and cluster the differential expression trends of genes across the three infection stages. In the miRNA transcriptome, 234 miRNAs and 966 predicted target genes were identified, with 86 differentially expressed miRNAs identified across the three time periods. A significant difference (P < 0.05) was observed for miRNAs including pcl-miR-146-3p, pcl-miR-74-3p, pcl-miR-225-5p, and pcl-miR-68-5p. These miRNAs are involved in multiple immune and autophagy-related pathways and have regulatory effects on immune genes including Vps26, lqf, and ERK-A. Based on the differentially expressed immune-related genes, we constructed a protein-protein interaction (PPI) network, which revealed the interactions among hub genes including Rac1, Akt1, Rho1, and Egfr. We also constructed a miRNA-gene interaction network in immune and autophagy-related processes, highlighting the potential regulatory effects of miRNAs including pcl-miR-183-5p, pcl-miR-146-3p, pcl-miR-176-5p, and pcl-miR-225-5p on proteins including LST8, SNAP29, Rab-7A, and ERK-A. To conclude, this study has identified hub immune genes and corresponding regulatory miRNAs in P. clarkii hemocytes in response to S. eriocheiris infection and explored the roles of these genes in selected pathways and processes. These findings are expected to provide further insights into the molecular mechanisms that confer resistance to S. eriocheiris infection in P. clarkii.


Asunto(s)
Astacoidea , Perfilación de la Expresión Génica , MicroARNs , ARN Mensajero , Spiroplasma , Transcriptoma , Animales , Spiroplasma/genética , MicroARNs/genética , Astacoidea/microbiología , Astacoidea/genética , Astacoidea/inmunología , ARN Mensajero/genética , Hemocitos/inmunología , Hemocitos/microbiología , Regulación de la Expresión Génica , Redes Reguladoras de Genes , Secuenciación de Nucleótidos de Alto Rendimiento , Interacciones Huésped-Patógeno/genética , Interacciones Huésped-Patógeno/inmunología
6.
Photochem Photobiol Sci ; 23(5): 957-972, 2024 May.
Artículo en Inglés | MEDLINE | ID: mdl-38613601

RESUMEN

Stem cell paracrine has shown potential application in skin wound repair and photoaging treatment. Our previous study demonstrated that miR-1246-overexpressing Exosomes (OE-EXs) isolated from adipose-derived stem cells (ADSCs) showed superior photo-protecting effects on UVB-induced photoaging than that of the vector, however, the underlying mechanism was unclear. The simultaneous bioinformatics analysis indicated that miR-1246 showed potential binding sites with GSK3ß which acted as a negative regulator for autophagy. This study was aimed to explore whether OE-EXs ameliorate skin photoaging by activating autophagy via targeting GSK3ß. The results demonstrated that OE-EXs significantly decreased GSK3ß expression, enhanced autophagy flux and autophagy-related proteins like LC3II, while suppressed p62 expression. Meanwhile, OE-EXs markedly reversed the levels of intracellular ROS, MMP-1, procollagen type I and DNA damage in human skin fibroblasts caused by UVB irradiation, but the ameliorating effects were significantly inhibited when 3-Methyladenine (3-MA) was introduced to block the autophagy pathway. Further, OE-EXs could reverse UVB-induced wrinkles, epidermal hyperplasia, and collagen fibers reduction in Kunming mice, nevertheless, the therapeutical effects of OE-EXs were attenuated when it was combinative treated with 3-MA. In conclusion, OE-EXs could cure UVB induced skin photoaging by activating autophagy via targeting GSK3ß.


Asunto(s)
Autofagia , Exosomas , Glucógeno Sintasa Quinasa 3 beta , MicroARNs , Envejecimiento de la Piel , Rayos Ultravioleta , Animales , Humanos , Ratones , Células Cultivadas , Exosomas/metabolismo , Fibroblastos/metabolismo , Glucógeno Sintasa Quinasa 3 beta/metabolismo , MicroARNs/genética , MicroARNs/metabolismo , MicroARNs/farmacología , Envejecimiento de la Piel/efectos de los fármacos , Envejecimiento de la Piel/efectos de la radiación
7.
BMC Cardiovasc Disord ; 24(1): 123, 2024 Feb 24.
Artículo en Inglés | MEDLINE | ID: mdl-38402377

RESUMEN

BACKGROUND: Acute myocardial infarction (AMI) is indeed a significant cause of mortality and morbidity in individuals with coronary heart disease. Ferroptosis, an iron-dependent cell death, is characterized by the accumulation of intracellular lipid peroxides, which is implicated in cardiomyocyte injury. This study aims to identify biomarkers that are indicative of ferroptosis in the context of AMI, and to examine their potential roles in immune infiltration. METHODS: Firstly, the GSE59867 dataset was used to identify differentially expressed ferroptosis-related genes (DE-FRGs) in AMI. We then performed gene ontology (GO) and functional enrichment analysis on these DE-FRGs. Secondly, we analyzed the GSE76591 dataset and used bioinformatic methods to build ceRNA networks. Thirdly, we identified hub genes in protein-protein interaction (PPI) network. After obtaining the key DE-FRGs through the junction of hub genes with ceRNA and least absolute shrinkage and selection operator (LASSO). ImmucellAI was applied to estimate the immune cell infiltration in each sample and examine the relationship between key DE-FRGs and 24 immunocyte subsets. The diagnostic performance of these genes was further evaluated using the receiver operating characteristic (ROC) curve analysis. Ultimately, we identified an immune-related ceRNA regulatory axis linked to ferroptosis in AMI. RESULTS: Among 56 DE-FRGs identified in AMI, 41 of them were integrated into the construction of competitive endogenous RNA (ceRNA) networks. TLR4 and PIK3CA were identified as key DE-FRGs and PIK3CA was confirmed as a diagnostic biomarker for AMI. Moreover, CD4_native cells, nTreg cells, Th2 cells, Th17 cells, central-memory cells, effector-memory cells, and CD8_T cells had higher infiltrates in AMI samples compared to control samples. In contrast, exhausted cells, iTreg cells, and Tfh cells had lower infiltrates in AMI samples. Spearman analysis confirmed the correlation between 24 immune cells and PIK3CA/TLR4. Ultimately, we constructed an immune-related regulatory axis involving XIST and OIP5-AS1/miR-216a/PIK3CA. CONCLUSION: Our comprehensive analysis has identified PIK3CA as a robust and promising biomarker for this condition. Moreover, we have also identified an immune-related regulatory axis involving XIST and OIP5-AS1/miR-216a/PIK3CA, which may play a key role in regulating ferroptosis during AMI progression.


Asunto(s)
Ferroptosis , MicroARNs , Infarto del Miocardio , Humanos , Ferroptosis/genética , Receptor Toll-Like 4/genética , Infarto del Miocardio/diagnóstico , Infarto del Miocardio/genética , Fosfatidilinositol 3-Quinasa Clase I , Biomarcadores
8.
Arch Phys Med Rehabil ; 105(10): 1900-1907, 2024 Oct.
Artículo en Inglés | MEDLINE | ID: mdl-39029774

RESUMEN

OBJECTIVE: To investigate the association of quadriceps strength with the presence of knee pain. DESIGN: This cross-sectional study was based on data from the 1999-2000 to 2001-2002 National Health and Nutrition Examination Survey. SETTING: This was a community-based study. PARTICIPANTS: This study included 2619 adults with complete data for knee pain, quadriceps strength, and covariates. INTERVENTION: Not applicable. MAIN OUTCOME MEASURES: Self-reported knee pain. RESULTS: This study included 2619 individuals, 1287 (52.66%) of whom were women and 1543 (81.66%) identified as Non-Hispanic White. The mean ±standard deviation age was 62.48±9.71 years. After adjusting for covariates, the odds of knee pain decreased with every 20 N/m increase in quadriceps strength (odds ratio, 0.87; 95% confidence interval, 0.81-0.94). Individuals in the upper quartile of quadriceps strength had lower odds of knee pain than those in the lower quartile (Q4 vs Q1 [reference]: odds ratio, 0.28, 95% confidence interval, 0.15-0.52; Ptrend=.006). Nonlinear analyses indicated L-shaped associations for knee pain. The subgroup analyses showed no significant interactions, except for sex (Pinteraction=.046). The significance of the sex interaction indicated a correlation exclusively in women. CONCLUSIONS: The results demonstrated an inverse association between quadriceps strength and the presence of knee pain. The subgroup analysis by sex showed that this inverse relationship was statistically significant in the women but not in the men subgroup.


Asunto(s)
Fuerza Muscular , Músculo Cuádriceps , Humanos , Femenino , Masculino , Músculo Cuádriceps/fisiopatología , Persona de Mediana Edad , Estudios Transversales , Fuerza Muscular/fisiología , Anciano , Encuestas Nutricionales , Articulación de la Rodilla/fisiopatología , Artralgia/fisiopatología , Factores Sexuales
9.
Ecotoxicol Environ Saf ; 286: 117182, 2024 Oct 14.
Artículo en Inglés | MEDLINE | ID: mdl-39405975

RESUMEN

OBJECTIVES: To investigate a potential association between exposure to different concentrations of environmental fine particulate matter (PM2.5) during early pregnancy and maternal thyroid hormone levels. METHODS: The Midong District of Urumqi City was selected as the site for PM2.5 exposure, while Bole City served as the non-exposed group. Participants were women volunteers enrolled before the 28th week of gestation. Basic data were collected, and levels of FT3, FT4, TSH, and urinary iodine were measured. Generalized linear models were used to investigate associations between different environmental exposures to PM2.5 and maternal thyroid hormone levels in early pregnancy. A restricted cubic spline was employed to examine exposure-response relationships between PM2.5 pollution and maternal thyroid hormone levels. RESULTS: The mean daily indoor, outdoor, and multi-environmental PM2.5 exposure of pregnant women in early pregnancy was significantly different between the two sites (p < 0.05). The average daily exposure concentrations of PM2.5 in different environments during the first weeks of pregnancy in the two regions were negatively correlated with maternal levels of FT3 and FT4. The risk of abnormal thyroid hormone levels was higher in pregnant women living in the Midong District compared to those from Bole City. CONCLUSIONS: PM2.5 exposure during early pregnancy was associated with decreased maternal levels of FT3 and FT4. The adverse health effects of exposure to PM2.5 during early pregnancy on both pregnant women and their offspring should be continually emphasized.

10.
Ecotoxicol Environ Saf ; 277: 116352, 2024 Jun 01.
Artículo en Inglés | MEDLINE | ID: mdl-38663195

RESUMEN

Cadmium (Cd) pollution in soil poses a global concern due to its serious impacts on human health and ecological security. In plants, tremendous efforts have been made to identify some key genes and pathways in Cd stress responses. However, studies on the roles of epigenetic factors in response to Cd stress were still limited. In the study, we first gain insight into the gene expression dynamics for maize seedlings under 0 h, 12 h, and 72 h Cd stress. As a result, six distinct groups of genes were identified by hierarchical clustering and principal component analysis. The key pathways associated with 12 h Cd stress were protein modifications including protein ubiquitination, signal transduction by protein phosphorylation, and histone modification. Whereas, under 72 h stress, main pathways were involved in biological processes including phenylalanine metabolism, response to oxygen-containing compounds and metal ions. Then to be noted, one of the most highly expressed genes at 12 h under Cd treatment is annotated as histone demethylases (ZmJMJ20). The evolutionary tree analysis and domain analysis showed that ZmJMJ20 belonged to the JmjC-only subfamily of the Jumonji-C (JmjC) family, and ZmJMJ20 was conserved in rice and Arabidopsis. After 72 h of Cd treatment, the zmjmj20 mutant created by EMS treatment manifested less severe chlorosis/leaf yellowing symptoms compared with wild-type plants, and there was no significant difference in Fv/Fm and φPSII value before and after Cd treatment. Moreover, the expression levels of several photosynthesis-related down-regulated genes in EMS mutant plants were dramatically increased compared with those in wild-type plants at 12 h under Cd treatment. Our results suggested that ZmJMJ20 plays an important role in the Cd tolerance response pathway and will facilitate the development of cultivars with improved Cd stress tolerance.


Asunto(s)
Cadmio , Perfilación de la Expresión Génica , Regulación de la Expresión Génica de las Plantas , Contaminantes del Suelo , Estrés Fisiológico , Zea mays , Zea mays/genética , Zea mays/efectos de los fármacos , Cadmio/toxicidad , Contaminantes del Suelo/toxicidad , Estrés Fisiológico/efectos de los fármacos , Regulación de la Expresión Génica de las Plantas/efectos de los fármacos , Histona Demetilasas/genética , Histona Demetilasas/metabolismo , Proteínas de Plantas/genética , Proteínas de Plantas/metabolismo , Plantones/efectos de los fármacos , Plantones/genética
11.
J Integr Neurosci ; 23(1): 14, 2024 Jan 16.
Artículo en Inglés | MEDLINE | ID: mdl-38287843

RESUMEN

BACKGROUND: Heliox shows protective effects against acute focal ischemia-reperfusion injury in the brain. However, further research is needed to unveil the intricate molecular mechanisms involved. Determining how heliox affects ferroptosis caused by oxygen-glucose deprivation/reoxygenation (OGD/R) in SH-SY5Y cells as well as the underlying mechanism was the goal of the current work. METHODS: With the use of 2',7'-Dichlorodihydrofluorescein diacetate (DCFH-DA), JC-1, and methyl thiazolyl tetrazolium, we assessed the survival, reactive oxygen species (ROS), and mitochondrial membrane potential in SH-SY5Y cells after they had been exposed to OGD/R and heliox. The expression of molecules associated with ferroptosis and the phosphatidylinositol 3-kinase/protein kinase B (PI3K/AKT) pathway was analyzed using quantitative polymerase chain reaction (PCR) and immunoblotting, while malondialdehyde (MDA), oxidized glutathione disulfide (GSSG), ferrous ion (Fe2+), and reduced glutathione (GSH) levels were evaluated using biochemical kits. RESULTS: OGD/R treatment reduced the GSH to GSSG ratio; the potential of the mitochondrial membrane; the expression of the proteins GSH, SLC7A11, and glutathione peroxidase 4 (GPX4); and the ability of SH-SY5Y cells to survive. In contrast, OGD/R treatment increased the expression of cyclooxygenase-2 (COX2), ACSL4, and ferritin heavy chain 1 (FTH1) proteins, the production of MDA and GSSG, and the levels of ROS and Fe2+. However, heliox effectively mitigated all these OGD/R-induced effects. Furthermore, in OGD/R-treated SH-SY5Y cells, heliox administration stimulated the PI3K/AKT pathway while suppressing the nuclear factor-κB (NF-κB) pathway. When MK-2206, an AKT inhibitor, was applied concurrently to the cells, these outcomes were reversed. CONCLUSIONS: Heliox prevents OGD/R from causing ferroptosis in SH-SY5Y cells by activating the PI3K/AKT pathway. This suggests a promising therapeutic potential for heliox use in the management of ischemia/reperfusion injury.


Asunto(s)
Ferroptosis , Helio , Neuroblastoma , Daño por Reperfusión , Humanos , Proteínas Proto-Oncogénicas c-akt/metabolismo , Especies Reactivas de Oxígeno/metabolismo , Fosfatidilinositol 3-Quinasas/metabolismo , Glucosa/metabolismo , Disulfuro de Glutatión/uso terapéutico , Oxígeno/metabolismo , Daño por Reperfusión/metabolismo , Reperfusión
12.
Angew Chem Int Ed Engl ; : e202419816, 2024 Oct 24.
Artículo en Inglés | MEDLINE | ID: mdl-39447111

RESUMEN

Nonoxidative dehydrogenation of propane is useful for the high selectivity to propylene but is suffering from the heavy coke deposition on the catalyst surface. Herein, we present a proof-of-concept application of a hole-hydrogen (H) couple on a metallic cobalt surface to decrease the deactivation rate. The coupled H atoms on the Co surface, partially resulting from propane dehydrogenation, enabled the desorption of propylene to avoid deep hydrogenolysis and coke deposition and realize selective and durable propylene production, while conventional Co metal-based catalysts do not generate propylene. The optimized hole-H coupled Co catalyst provided a low deactivation rate (0.0036 h-1) and a high turnover frequency (55.6 h-1) for propylene production with a high propane flux (48 vol.% C3H8 in gas feeds) at 550 °C.

13.
J Cell Sci ; 134(18)2021 09 15.
Artículo en Inglés | MEDLINE | ID: mdl-34409458

RESUMEN

Emerging evidence has demonstrated that nucleoporins (Nups) play a pivotal role in cell-type-specific gene regulation, but how they control the expression and activity of ion channel genes in the heart remains unclear. Here, we show that Nup50, which is localized in the nucleus of cardiomyocytes, selectively induces an increase in the transcription and translation of Kcna4. The Kcna4 gene encodes a K+ voltage-gated channel of shaker-related subfamily member 4 and is essential for regulating the action potential in cardiac membranes. Using immunofluorescence imaging, luciferase assays and chromatin immunoprecipitation assays, we identified that the direct binding of the FG-repeat domain within Nup50 to the proximity of the Kcna4 promoter was required to activate the transcription and subsequent translation of Kcna4. Functionally, Nup50 overexpression increased the currents of KCNA4-encoded Ito,s channels, and reverse knockdown of Nup50 resulted in a remarkable decrease in the amplitude of Ito,s currents in cardiomyocytes. Moreover, a positive correlation between Nup50 and Kcna4 mRNA and protein expression was observed in heart tissues subjected to ischemic insults. These findings provide insights into the homeostatic control of cardiac electrophysiology through Nup-mediated regulation.


Asunto(s)
Miocitos Cardíacos , Proteínas de Complejo Poro Nuclear , Potenciales de Acción , Proteínas de Complejo Poro Nuclear/genética , Regiones Promotoras Genéticas/genética , ARN Mensajero
14.
BMC Plant Biol ; 23(1): 470, 2023 Oct 06.
Artículo en Inglés | MEDLINE | ID: mdl-37803280

RESUMEN

BACKGROUND: Genomic imprinting refers to a subset of genes that are expressed from only one parental allele during seed development in plants. Studies on genomic imprinting have revealed that intraspecific variations in genomic imprinting expression exist in naturally genetic varieties. However, there have been few studies on the functional analysis of allele-specific imprinted genes. RESULTS: Here, we generated three reciprocal crosses among the B73, Mo17 and CAU5 inbred lines. Based on the transcriptome-wide analysis of allele-specific expression using RNA sequencing technology, 305 allele-specific imprinting genes (ASIGs) were identified in embryos, and 655 ASIGs were identified in endosperms from three maize F1 hybrids. Of these ASIGs, most did not show consistent maternal or paternal bias between the same tissue from different hybrids or different tissues from one hybrid cross. By gene ontology (GO) analysis, five and eight categories of GO exhibited significantly higher functional enrichments for ASIGs identified in embryo and endosperm, respectively. These functional categories indicated that ASIGs are involved in intercellular nutrient transport, signaling pathways, and transcriptional regulation of kernel development. Finally, the mutation and overexpression of one ASIG (Zm305) affected the length and width of the kernel. CONCLUSION: In this study, our data will be helpful in gaining further knowledge of genes exhibiting allele-specific imprinting patterns in seeds. The gain- and loss-of-function phenotypes of ASIGs associated with agronomically important seed traits provide compelling evidence for ASIGs as crucial targets to optimize seed traits in crop plants.


Asunto(s)
Endospermo , Transcriptoma , Endospermo/metabolismo , Alelos , Zea mays/metabolismo , Semillas/genética , Impresión Genómica , Regulación de la Expresión Génica de las Plantas
15.
Opt Express ; 31(24): 39852-39866, 2023 Nov 20.
Artículo en Inglés | MEDLINE | ID: mdl-38041299

RESUMEN

Machine learning methods have been regarded as practical tools for the inverse design of nanophotonic devices. However, for the devices with complex expected targets, such as the spectrum with multiple peaks and valleys, there are still many sufferings remaining for these data-driven approaches, such as overfitting. To resolve it, we firstly propose a hybrid inverse design scheme combining supervised and unsupervised learning. Compared with the previous inverse design schemes based on artificial neural networks (ANNs), clustering algorithms and an encoder model are introduced for data preprocessing. A typical metamaterial composed of multiple metal strips that can produce tunable dual plasmon-induced transparency phenomena is designed to verify the performance of our proposed hybrid scheme. Compared with the ANNs directly trained by the entire dataset, the loss functions (mean squared error) of the ANNs in our hybrid scheme can be effectively reduced by more than 51% for both training and test datasets under the same training conditions. Our hybrid scheme paves an efficient improvement for the inverse design tasks with complex targets.

16.
Photochem Photobiol Sci ; 22(1): 135-146, 2023 Jan.
Artículo en Inglés | MEDLINE | ID: mdl-36114328

RESUMEN

Stem cell therapy is widely employed for the treatment of skin diseases, especially in skin rejuvenation. Exosomes derived from stem cells have been demonstrated to possess anti-photoaging effects; however, the precise components within exosomes that are responsible for this effect remain unknown. Previously, miR-1246 was found to be one of the most abundant nucleic acids in adipose-derived stem cells (ADSCs)-derived exosomes. This study examined whether miR-1246 was the major therapeutic agent employed by ADSCs to protect against UVB-induced photoaging. Lentivirus infection was used to obtain miR-1246-overexpressing ADSCs and exosomes. We then determined the anti-photoaging effects of miR-1246-overexpressing exosomes (OE-EX) on both UVB-irradiated human skin fibroblasts (HSFs) and Kunming mice. The results showed that OE-EX could significantly decrease MMP-1 by inhibiting the MAPK/AP-1 signaling pathway. Meanwhile, OE-EX markedly increased procollagen type I secretion by activating the TGF-ß/Smad pathway. OE-EX also exhibited an anti-inflammatory effect by preventing the UVB-induced degradation of IκB-α and NF-κB overexpression. Animal experiments demonstrated that OE-EX could reduce UVB-induced wrinkle formation, epidermis thickening, and the loss of collagen fibers reduction in Kunming mice. The combined results suggested that miR-1246 is the key component within ADSCs-derived exosomes that protects against UVB-induced skin photoaging.


Asunto(s)
Exosomas , MicroARNs , Envejecimiento de la Piel , Enfermedades de la Piel , Ratones , Animales , Humanos , Factor de Transcripción AP-1/metabolismo , Factor de Crecimiento Transformador beta/metabolismo , Factor de Crecimiento Transformador beta/farmacología , Exosomas/metabolismo , Piel , MicroARNs/genética , MicroARNs/metabolismo , MicroARNs/farmacología , Enfermedades de la Piel/metabolismo , Rayos Ultravioleta , Fibroblastos
17.
Photodermatol Photoimmunol Photomed ; 39(5): 466-477, 2023 Sep.
Artículo en Inglés | MEDLINE | ID: mdl-37165910

RESUMEN

BACKGROUND: UV exposure is one of the primary factors responsible for photoaging, causing the increase in matrix metalloproteinases (MMPs) and the reduction in collagen. Salvia plebeia R. Br (SP), as an herbaceous plant, contains abundant flavonoids and possesses excellent anti-inflammatory and antioxidant activities. This study aimed to investigate the photoprotective effects of SP on UVB-induced photodamage in immortalized human keratinocytes (HaCaTs) and Kunming mice, as well as its main active components such as homoplantaginin (HP). METHODS: CCK-8 was applied to detect the cell viability in UVB-irradiated or non-irradiated HaCaTs. Commercial kits were used to evaluate the levels of ROS, MDA, SA-ß-Gal, MMP-1, and IL-6. The expression of MAPK and TGF-ß/Smad pathways was detected by western blot. HE and Masson's trichrome staining were performed to examine the epidermis thickness and collagen degradation of Kunming mice. RESULTS: Our results found that SP and HP notably decreased UVB-induced ROS, MDA, and SA-ß-Gal production, and inhibited MMP-1 and IL-6 secretion by inhibiting the MAPK signaling pathway. In addition, SP and HP significantly promoted type I procollagen synthesis by activation of TGF-ß/Smad pathway. Consistently, the in vivo experiments also indicated that SP and HP had a photoprotective effect, which significantly reversed UVB-induced epidermis thickness and collagen degradation. CONCLUSION: This study demonstrated that SP effectively could protect skin from UVB-induced photoaging, while HP acted as the active substance in SP. All these findings provided a new strategy for skin photoaging treatment.


Asunto(s)
Metaloproteinasa 1 de la Matriz , Envejecimiento de la Piel , Ratones , Animales , Humanos , Metaloproteinasa 1 de la Matriz/metabolismo , Interleucina-6 , Etanol/metabolismo , Etanol/farmacología , Especies Reactivas de Oxígeno/metabolismo , Colágeno/metabolismo , Piel/metabolismo , Factor de Crecimiento Transformador beta/metabolismo , Factor de Crecimiento Transformador beta/farmacología , Rayos Ultravioleta/efectos adversos , Fibroblastos/metabolismo , Extractos Vegetales/farmacología
18.
Proc Natl Acad Sci U S A ; 117(15): 8455-8461, 2020 04 14.
Artículo en Inglés | MEDLINE | ID: mdl-32234783

RESUMEN

The reduction of protochlorophyllide (Pchlide) to chlorophyllide (Chlide) is the penultimate step of chlorophyll biosynthesis. In oxygenic photosynthetic bacteria, algae, and plants, this reaction can be catalyzed by the light-dependent Pchlide oxidoreductase (LPOR), a member of the short-chain dehydrogenase superfamily sharing a conserved Rossmann fold for NAD(P)H binding and the catalytic activity. Whereas modeling and simulation approaches have been used to study the catalytic mechanism of this light-driven reaction, key details of the LPOR structure remain unclear. We determined the crystal structures of LPOR from two cyanobacteria, Synechocystis sp. PCC 6803 and Thermosynechococcus elongatus Structural analysis defines the LPOR core fold, outlines the LPOR-NADPH interaction network, identifies the residues forming the substrate cavity and the proton-relay path, and reveals the role of the LPOR-specific loop. These findings provide a basis for understanding the structure-function relationships of the light-driven Pchlide reduction.


Asunto(s)
Cianobacterias/enzimología , Luz , NADP/metabolismo , Oxidorreductasas actuantes sobre Donantes de Grupo CH-CH/química , Oxidorreductasas actuantes sobre Donantes de Grupo CH-CH/metabolismo , Protoclorofilida/metabolismo , Synechocystis/enzimología , Catálisis , Clorofila/metabolismo , Cristalografía por Rayos X , Modelos Moleculares , NADP/química , Conformación Proteica , Protoclorofilida/química , Protones , Thermosynechococcus
19.
Mycorrhiza ; 33(1-2): 107-118, 2023 Mar.
Artículo en Inglés | MEDLINE | ID: mdl-36396734

RESUMEN

Orchids commonly rely on mycorrhizal fungi to obtain the necessary resources for seed germination and growth. Whereas most photosynthetic orchids typically associate with so-called rhizoctonia fungi to complete their life cycle, there is increasing evidence that other fungi may be involved as well and that the mycorrhizal communities associated with orchids may be more diverse. Coexisting orchid species also tend to associate with different fungi to reduce competition for similar resources and to increase long-term population viability. However, few studies have related the mycorrhizal communities in the rhizosphere to communities found in the roots of closely related coexisting orchid species. In this study, we used high-throughput sequencing to investigate the diversity and community composition of orchid mycorrhizal fungi in the roots and the rhizosphere of four Cypripedium species growing in forests in Northeast China. The results showed that the investigated Cypripedium species associated with a wide variety of fungi including members of Tulasnellaceae, Psathyrellaceae, and Herpotrichiellaceae, whereas members of Russulaceae, Cortinariaceae, Thelephoraceae, and Herpotrichiellaceae showed high abundance in rhizosphere soils. The diversity of fungi detected in the rhizosphere soil was much higher than that in the roots. The observed variation in fungal communities in Cypripedium roots was not related to forest site or orchid species. On the other hand, variation in mycorrhizal communities of rhizosphere soil was significantly related to sampling site. These results indicate that orchid mycorrhizal communities in the rhizosphere display considerable variation among sites and that orchids use only a subset of the locally available fungi. Future studies focusing on the fine-scale spatial distribution of orchid mycorrhizal fungi and more detailed assessments of local environmental conditions will provide novel insights into the mechanisms explaining variation of fungal communities in both orchid roots and the rhizosphere.


Asunto(s)
Agaricales , Basidiomycota , Micorrizas , Orchidaceae , Micorrizas/genética , Orchidaceae/microbiología , Especificidad de la Especie , Raíces de Plantas/microbiología , Suelo , Filogenia , Simbiosis
20.
Sensors (Basel) ; 23(18)2023 Sep 11.
Artículo en Inglés | MEDLINE | ID: mdl-37765851

RESUMEN

A model-free adaptive positioning control strategy for piezoelectric stick-slip actuators (PSSAs) with uncertain disturbance is proposed. The designed controller consists of a data-driven self-learning feedforward controller and a model-free adaptive feedback controller with a radial basis function neural network (RBFNN)-based observer. Unlike the traditional model-based control methods, the model-free adaptive control (MFAC) strategy avoids the complicated modeling process. First, the nonlinear system of the PSSA is dynamically linearized into a data model. Then, the model-free adaptive feedback controller based on a data model is designed to avoid the complicated modeling process and enhance the robustness of the control system. Simultaneously, the data-driven self-learning feedforward controller is improved to realize the high-precision control performance. Additionally, the convergence of the tracking error and the boundedness of the control output signal are proved. Finally, the experimentally obtained results illustrate the advantages and effectiveness of the developed control methodology on the bidirectional stick-slip piezoelectric actuator with coupled asymmetric flexure-hinge mechanisms. The positioning error through the proposed controller reaches 30 nm under the low-frequency condition and 200 nm under the high-frequency condition when the target position is set to 100 µm. In addition, the target position can be accurately tracked in less than 0.5 s in the presence of a 100 Hz frequency.

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