Strong bacterial stochasticity and fast fungal turnover in Taihu Lake sediments, China.

Understanding the assembly and turnover of microbial communities is crucial for gaining insights into the diversity and functioning of lake ecosystems, a fundamental and central issue in microbial ecology. The ecosystem of Taihu Lake has been significantly jeopardized due to urbanization and industrialization. In this study, we examined the diversity, assembly, and turnover of bacterial and fungal communities in Taihu Lake sediment. The results revealed strong bacterial stochasticity and fast fungal turnover in the sediment. Significant heterogeneity was observed among all sediment samples in terms of environmental factors, especially ORP, TOC, and TN, as well as microbial community composition and alpha diversity. For instance, the fungal richness index exhibited an approximate 3-fold variation. Among the environmental factors, TOC, TN, and pH had a more pronounced influence on the bacterial community composition compared to the fungal community composition. Interestingly, species replacement played a dominant role in microbial beta diversity, with fungi exhibiting a stronger pattern. In contrast, stochastic processes governed the community assembly of both bacteria and fungi, but were more pronounced for bacteria (R2 = 0.7 vs. 0.5). These findings deepen the understanding of microbial assembly and turnover in sediments under environmental stress and provide essential insights for maintaining the multifunctionality of lake ecosystems.

Predicting the effects of multiple global change drivers on microbial communities remains challenging.

Microbial communities in many ecosystems are facing a broad range of global change drivers, such as nutrient enrichment, chemical pollution, and temperature change. These drivers can cause changes in the abundance of taxa, the composition of communities, and the properties of ecosystems. While the influence of single drivers is already described in numerous studies, the effect and predictability of multiple drivers changing simultaneously is still poorly understood. In this study, we used 240 highly replicable oxic/anoxic aquatic lab microcosms and four drivers (fertilizer, glyphosate, metal pollution, antibiotics) in all possible combinations at three different temperatures (20, 24, and 28°C) to shed light into consequences of multiple drivers on different levels of organization, ranging from species abundance to community and ecosystem parameters. We found (i) that at all levels of ecological organization, combinations of drivers can change the biological consequence and direction of effect compared to single drivers, (ii) that effects of combinations are further modified by temperature, (iii) that a larger number of drivers occurring simultaneously is often quite closely related to their effect size, and (iv) that there is little evidence that any of these effects are associated with the level of ecological organization of the state variable. These findings suggest that, at least in this experimental ecosystem approximating a stratified aquatic ecosystem, there may be relatively little scope for predicting the effects of combinations of drivers from the effects of individual drivers, or by accounting for the level of ecological organization in question, though there may be some scope for prediction based on the number of drivers that are occurring simultaneous. A priority, though also a considerable challenge, is to extend such research to consider continuous variation in the magnitude of multiple drivers acting together.

Anthropogenic climate change has altered lake state in the Sierra Nevada (California, USA).

Climatic changes threaten freshwater resources and aquatic ecosystem health in the Sierra Nevada (California, USA), which has important consequences for millions of people and the world's fifth largest economy. However, the timing and magnitude of ecological changes driven by hydroclimate oscillations remain poorly understood in California's headwater region. Here, we develop a precisely dated, annually to decadally resolved lake sediment record of ecological change from the eastern Sierra Nevada that spans the last three millennia. Diatom paleoecology reveals a detailed history of abrupt limnologic transitions, best explained by modifications in water column stratification, mixing, and nutrient status in response to changing seasonality. Seasonally stratified conditions were registered during the Late Holocene Dry Period and the Medieval Climate Anomaly, illustrating the sensitivity of fossil diatoms to well-known periods of drought. Yet the most striking feature of the record is the uniqueness of ~1840-2016 CE: a period of singularly strong water column stratification, increased algal diversity, and reduced diatom productivity consistent with unprecedented "hot droughts." The data demonstrate that hot-dry conditions of the Industrial Era altered lake state to conditions unseen in the past ~3180 years, and suggest that regional trends identified by historical monitoring began far earlier than previously recognized. Our record illustrates the profound influence of anthropogenic climate warming on high-elevation lakes and the ecosystem services they provide in the Sierra Nevada, which hold implications for water quality and availability in California.

Taxonomic differences shape the responses of freshwater aerobic anoxygenic phototrophic bacterial communities to light and predation.

Aerobic anoxygenic phototrophic (AAP) bacteria are a phylogenetically diverse and ubiquitous group of prokaryotes that use organic matter but can harvest light using bacteriochlorophyll a. Although the factors regulating AAP ecology have long been investigated through field surveys, the few available experimental studies have considered AAPs as a group, thus disregarding the potential differential responses between taxonomically distinct AAP assemblages. Here, we used sequencing of the pufM gene to describe the diversity of AAPs in 10 environmentally distinct temperate lakes, and to investigate the taxonomic responses of AAP communities in these lakes when subjected to similar experimental manipulations of light and predator removal. The studied communities were clearly dominated by Limnohabitans AAP but presented a clear taxonomic segregation between lakes presumably driven by local conditions, which was maintained after experimental manipulations. Predation reduction (but not light exposure) caused significant compositional shifts across most assemblages, but the magnitude of these changes could not be clearly related to changes in bulk AAP abundances or taxonomic richness of AAP assemblages during experiments. Only a few operational taxonomic units, which differed taxonomically between lakes, were found to respond positively during experimental treatments. Our results highlight that different freshwater AAP communities respond differently to similar control mechanisms, highlighting that in-depth knowledge on AAP diversity is essential to understand the ecology and potential role of these photoheterotrophs.

Trade-off between taxon diversity and functional diversity in European lake ecosystems.

Inferring ecosystem functioning and ecosystem services through inspections of the species inventory is a major aspect of ecological field studies. Ecosystem functions are often stable despite considerable species turnover. Using metatranscriptome analyses, we analyse a thus-far unparalleled freshwater data set which comprises 21 mainland European freshwater lakes from the Sierra Nevada (Spain) to the Carpathian Mountains (Romania) and from northern Germany to the Apennines (Italy) and covers an altitudinal range from 38 m above sea level (a.s.l) to 3110 m a.s.l. The dominant taxa were Chlorophyta and streptophytic algae, Ciliophora, Bacillariophyta and Chrysophyta. Metatranscriptomics provided insights into differences in community composition and into functional diversity via the relative share of taxa to the overall read abundance of distinct functional genes on the ecosystem level. The dominant metabolic pathways in terms of the fraction of expressed sequences in the cDNA libraries were affiliated with primary metabolism, specifically oxidative phosphorylation, photosynthesis and the TCA cycle. Our analyses indicate that community composition is a good first proxy for the analysis of ecosystem functions. However, differential gene regulation modifies the relative importance of taxa in distinct pathways. Whereas taxon composition varies considerably between lakes, the relative importance of distinct metabolic pathways is much more stable, indicating that ecosystem functioning is buffered against shifts in community composition through a functional redundancy of taxa.

Distinct food-web transfers of 137Cs to fish in river and lake ecosystems: A case study focusing on masu salmon in the Fukushima evacuation zone.

This study was conducted to elucidate the spatial and size variations, and food-web transfer of 137Cs in freshwater fish in the upper reaches of the Ukedo River system, a highly contaminated river system flowing through the Fukushima evacuation zone. Fish collection and environmental surveys were conducted in the summer of 2020 at five forest rivers and at the Ogaki Dam reservoir (an artificial lake) with different air dose rates (mean 0.20-3.32 µSv/h). From the river sites, two salmonid species (masu salmon and white-spotted charr) were sampled, with masu salmon generally exhibiting higher 137Cs concentrations, ranging widely (10.6 Bq/kg-wet to 13.0 kBq/kg-wet) depending on the fish size (size effect) and site. The 137Cs concentrations in masu salmon were explained by the air dose rates, 137Cs concentrations in water, sediments (excluding the lake site), and primary producers, with site-specific variations. In the rivers, masu salmon (fluvial type with parr marks) mainly fed on terrestrial insects with higher 137Cs concentrations compared with those of aquatic insects, indicating that 137Cs was transferred mainly to fish through the allochthonous forest food-web during summer. In the lake, masu salmon (lake-run type with larger size and silvery body coloration) mainly preyed on smaller fish with lower 137Cs concentrations, demonstrating that 137Cs is transferred to fish through the autochthonous lake food-web with biomagnification. Differences in 137Cs concentrations among masu salmon (mean 441 Bq/kg-wet) and other fish species (mean 74.8 Bq/kg-wet to 2.35 kBq/kg-wet) were also found in the lake. The distinct 137Cs transfers to river and lake fish were supported by stable isotope analysis: δ15N and δ13C values enriched stepwisely through the food-webs were, respectively, higher and lower in the lake. Our results obtained using multiple approaches clearly revealed the distinct food-web transfer of 137Cs in river and lake ecosystems. These findings can contribute to prediction of radioactive contamination in freshwater fish in the Fukushima evacuation zone.

Impacts of environmental flow regulation on survival of aquatic organisms: a case study of Cyprinus Carpio in Baiyangdian, China.

Decreasing water volume and increasing pollutants in wetlands pose challenges to aquatic life. While environmental flow regulation is widely applied to enhance aquatic habitats, its effectiveness needs to be evaluated. In this study, a hydrodynamic-water quality model was used to simulate the fields of flow, temperature, and pollutants. The Ecological Niche Modeling at the MetaLand EcologyLab (ENMTML) was utilized to evaluate the area of suitable habitats for aquatic organisms under both environmental flow regulation and no environmental flow regulation conditions. The typical Baiyangdian Wetland in northern China was taken as the study area, and the important economic fish, Cyprinus carpio, served as the indicator of aquatic species. The effectiveness of environmental flow regulation was evaluated from December 1, 2017, to June 30, 2018. The results indicated that the variables of water depth, dissolved oxygen (DO), ammonia nitrogen (NH4+-N) and Chlorophyll a (Chla) were the major environmental factors determining the variability of the suitable habitat area for Cyprinus carpio. The environmental flow regulation capacity of the Baiyangdian Wetland was 2.6 [Formula: see text] 108 m3, which produced a suitable habitat area of 135.538 km2 at the end of the water supply period. Compared with the no environmental flow regulation condition, the highly and moderately suitable habitat areas for Cyprinus carpio were enlarged by 56.30 km2 and 34.11 km2, respectively. The outcome provides not only a basic reference for wetland management, but also a scientific perspective for understanding the impact of environmental flow regulation on aquatic organisms. The proposed method demonstrates the important potential of evaluating the effectiveness of environmental flow regulation on aquatic organisms in wetlands.

Unraveling the rate-limiting step in microorganisms' mediation of denitrification and phosphorus absorption/transport processes in a highly regulated river-lake system.

River-lake ecosystems are indispensable hubs for water transfers and flow regulation engineering, which have frequent and complex artificial hydrological regulation processes, and the water quality is often unstable. Microorganisms usually affect these systems by driving the nutrient cycling process. Thus, understanding the key biochemical rate-limiting steps under highly regulated conditions was critical for the water quality stability of river-lake ecosystems. This study investigated how the key microorganisms and genes involving nitrogen and phosphorus cycling contributed to the stability of water by combining 16S rRNA and metagenomic sequencing using the Dongping river-lake system as the case study. The results showed that nitrogen and phosphorus concentrations were significantly lower in lake zones than in river inflow and outflow zones (p < 0.05). Pseudomonas, Acinetobacter, and Microbacterium were the key microorganisms associated with nitrate and phosphate removal. These microorganisms contributed to key genes that promote denitrification (nirB/narG/narH/nasA) and phosphorus absorption and transport (pstA/pstB/pstC/pstS). Partial least squares path modeling (PLS-PM) revealed that environmental factors (especially flow velocity and COD concentration) have a significant negative effect on the key microbial abundance (p < 0.001). Our study provides theoretical support for the effective management and protection of water transfer and the regulation function of the river-lake system.

Overlooked great role of wind erosion in terrestrial dissolved organic matter input to lake ecosystem in cold and arid regions.

Lakes in cold and arid regions have weak hydrological connectivity to their watersheds and serious soil erosion by wind, and are particularly sensitive to changes in underlying surface process and global climate changes, which may result in unique carbon cycles across the terrestrial-aquatic interface and ecological impacts. However, the roles of input pathways of terrestrial dissolved organic matter (TDOM) to lakes in cold and arid regions, especially the effects of possible TDOM input caused by wind erosion, has not been fully understood. Taking a typical lake in cold and arid regions as an example, this study comprehensively investigated the characteristics and contributions of dissolved organic matter (DOM) input from different TDOM input pathways, ultimately highlighted the impacts of wind erosion from composition characteristics, historical changes and universal proofs. The results showed that DOM introduced by wind erosion contributed 37.34 % to all TDOM input, and exhibited the strongest humification and aromaticity, and greatest molecular weight and stability. The considerable input and refractory characteristics led to the differences in the TDOM distribution and DOM composition between the near-wind and far-wind shores of the lake. Moreover, historical analysis showed that wind erosion became the main way driving the changes in buried terrestrial organic matter in the lake through a combined action of precipitation and land cover changes after 2008. The pervasive importance of wind erosion pathways on TDOM inputs in the cold and arid regions was further demonstrated through the proof from two other representative lakes. The findings also shed light on the possible impacts of wind erosion on material distribution, aquatic productivity, and energy input in lake ecosystems. The study provides new insights to broaden the content of global lake-landscape interactions and regional ecosystem conservation.

Differential selenium uptake by periphyton in boreal lake ecosystems.

The largest and most variable step of selenium (Se) assimilation into aquatic ecosystems is the rapid uptake of aqueous Se by primary producers. These organisms can transfer more harmful forms of Se to higher trophic levels via dietary pathways, although much uncertainty remains around this step of Se assimilation due to site-specific differences in water chemistry, hydrological and biogeochemical characteristics, and community composition. Thus, predictions of Se accumulation are difficult, and boreal lake systems are relatively understudied. To address these knowledge gaps, five static-renewal field experiments were performed to examine the bioaccumulation of low, environmentally relevant concentrations of Se, as selenite, by naturally grown periphyton from multiple boreal lakes. Periphyton rapidly accumulated Se at low aqueous Se concentrations, with tissue Se concentrations ranging from 8.0 to 24.9 µg/g dry mass (dm) in the 1-2 µg Se/L treatments. Enrichment functions ranged from 2870 to 12 536 L/kg dm in the 4 µg Se/L treatment, to 11 867-22 653 L/kg dm in the 0.5 µg Se/L treatment among lakes. Periphyton Se uptake differed among the five study lakes, with periphyton from mesotrophic lakes generally accumulating more Se than periphyton from oligotrophic lakes. Higher proportions of charophytes and greater dissolved inorganic carbon in more oligotrophic lakes corresponded to less periphyton Se uptake. Conversely, increased proportions of bacillariophytes and total dissolved phosphorus in more mesotrophic lakes corresponded to greater periphyton Se uptake. Periphyton community composition and water chemistry variables were correlated, limiting interpretation of differences in periphyton Se accumulation among lakes. The results of this research provide insight on the biodynamics of Se assimilation at the base of boreal lake food webs at environmentally relevant concentrations, which can potentially inform ecological risk assessments in boreal lake ecosystems in North America.