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1.
PLoS Comput Biol ; 17(6): e1009067, 2021 06.
Artículo en Inglés | MEDLINE | ID: mdl-34125841

RESUMEN

Campylobacter jejuni (C. jejuni) causes gastroenteritis following the consumption of contaminated poultry meat, resulting in a large health and economic burden worldwide. Phage therapy is a promising technique for eradicating C. jejuni from poultry flocks and chicken carcasses. However, C. jejuni can resist infections by some phages through stochastic, phase-variable ON/OFF switching of the phage receptors mediated by simple sequence repeats (SSR). While selection strength and exposure time influence the evolution of SSR-mediated phase variation (PV), phages offer a more complex evolutionary environment as phage replication depends on having a permissive host organism. Here, we build and explore several continuous culture bacteria-phage computational models, each analysing different phase-variable scenarios calibrated to the experimental SSR rates of C. jejuni loci and replication parameters for the F336 phage. We simulate the evolution of PV rates via the adaptive dynamics framework for varying levels of selective pressures that act on the phage-resistant state. Our results indicate that growth reducing counter-selection on a single PV locus results in the stable maintenance of the phage, while compensatory selection between bacterial states affects the evolutionary stable mutation rates (i.e. very high and very low mutation rates are evolutionarily disadvantageous), whereas, in the absence of either selective pressure the evolution of PV rates results in mutation rates below the basal values. Contrastingly, a biologically-relevant model with two phase-variable loci resulted in phage extinction and locking of the bacteria into a phage-resistant state suggesting that another counter-selective pressure is required, instance, the use of a distinct phage whose receptor is an F336-phage-resistant state. We conclude that a delicate balance between counter-selection and phage-attack can result in both the evolution of phase-variable phage receptors and persistence of PV-receptor-specific phage.


Asunto(s)
Receptores de Bacteriógrafos/genética , Infecciones por Campylobacter/terapia , Campylobacter jejuni/genética , Campylobacter jejuni/virología , Terapia de Fagos , Animales , Receptores de Bacteriógrafos/fisiología , Infecciones por Campylobacter/microbiología , Infecciones por Campylobacter/virología , Biología Computacional , Simulación por Computador , Evolución Molecular , Regulación Bacteriana de la Expresión Génica , Genes Bacterianos , Humanos , Interacciones Microbianas/genética , Interacciones Microbianas/fisiología , Repeticiones de Microsatélite , Modelos Biológicos , Mutación , Terapia de Fagos/métodos , Terapia de Fagos/estadística & datos numéricos
2.
Food Microbiol ; 100: 103853, 2021 Dec.
Artículo en Inglés | MEDLINE | ID: mdl-34416958

RESUMEN

The combined effects of ethylenediaminetetraacetic acid (EDTA) and bacteriophage (phage) treatment of foodborne pathogens were investigated. Although viable counts for Campylobacter jejuni decreased by 1.5 log after incubation for 8 h in the presence of phage PC10, re-growth was observed thereafter. The combination of phage PC10 and 1 mM EDTA significantly inhibited the re-growth of C. jejuni. The viable counts for C. jejuni decreased by 2.6 log (P < 0.05) compared with that of the initial count after 24 h. Moreover, EDTA at 0.67 or 1.3 mM, combined with the specific lytic phages, also effectively inhibited the re-growth of phage-resistant cells of Campylobacter coli, Salmonella enterica serovar Enteritidis, and Salmonella enterica serovar Typhimurium. In addition, the combined effects of lytic phages and EDTA were investigated on the viability of Campylobacter in BHI broth at low temperatures followed by the optimum growth temperature. The re-growth of C. coli was significantly inhibited by the coexistence of 1.3 mM EDTA, and the viable counts of surviving bacteria was about the same as the initial viable count after the incubation. This is the first study demonstrating the combined use of lytic phages and EDTA is effective in inhibiting the re-growth of phage-resistant bacteria in Gram-negative bacteria.


Asunto(s)
Bacteriófagos/fisiología , Campylobacter coli/crecimiento & desarrollo , Campylobacter jejuni/crecimiento & desarrollo , Ácido Edético/farmacología , Salmonella enteritidis/crecimiento & desarrollo , Salmonella typhimurium/crecimiento & desarrollo , Campylobacter coli/efectos de los fármacos , Campylobacter coli/virología , Campylobacter jejuni/efectos de los fármacos , Campylobacter jejuni/virología , Viabilidad Microbiana , Salmonella enteritidis/efectos de los fármacos , Salmonella enteritidis/virología , Salmonella typhimurium/efectos de los fármacos , Salmonella typhimurium/virología
3.
J Virol ; 93(23)2019 12 01.
Artículo en Inglés | MEDLINE | ID: mdl-31511377

RESUMEN

Several reports have demonstrated that Campylobacter bacteriophage DNA is refractory to manipulation, suggesting that these phages encode modified DNA. The characterized Campylobacter jejuni phages fall into two phylogenetic groups within the Myoviridae: the genera Firehammervirus and Fletchervirus Analysis of genomic nucleosides from several of these phages by high-pressure liquid chromatography-mass spectrometry confirmed that 100% of the 2'-deoxyguanosine (dG) residues are replaced by modified bases. Fletcherviruses replace dG with 2'-deoxyinosine, while the firehammerviruses replace dG with 2'-deoxy-7-amido-7-deazaguanosine (dADG), noncanonical nucleotides previously described, but a 100% base substitution has never been observed to have been made in a virus. We analyzed the genome sequences of all available phages representing both groups to elucidate the biosynthetic pathway of these noncanonical bases. Putative ADG biosynthetic genes are encoded by the Firehammervirus phages and functionally complement mutants in the Escherichia coli queuosine pathway, of which ADG is an intermediate. To investigate the mechanism of DNA modification, we isolated nucleotide pools and identified dITP after phage infection, suggesting that this modification is made before nucleotides are incorporated into the phage genome. However, we were unable to observe any form of dADG phosphate, implying a novel mechanism of ADG incorporation into an existing DNA strand. Our results imply that Fletchervirus and Firehammervirus phages have evolved distinct mechanisms to express dG-free DNA.IMPORTANCE Bacteriophages are in a constant evolutionary struggle to overcome their microbial hosts' defenses and must adapt in unconventional ways to remain viable as infectious agents. One mode of adaptation is modifying the viral genome to contain noncanonical nucleotides. Genome modification in phages is becoming more commonly reported as analytical techniques improve, but guanosine modifications have been underreported. To date, two genomic guanosine modifications have been observed in phage genomes, and both are low in genomic abundance. The significance of our research is in the identification of two novel DNA modification systems in Campylobacter-infecting phages, which replace all guanosine bases in the genome in a genus-specific manner.


Asunto(s)
Bacteriófagos/genética , Campylobacter jejuni/virología , Desoxiguanosina/genética , Inosina/genética , Vías Biosintéticas/genética , ADN Viral/genética , Desoxiguanosina/análogos & derivados , Desoxiguanosina/metabolismo , Escherichia coli/metabolismo , Escherichia coli/virología , Genoma Viral , Inosina/análogos & derivados , Inosina/metabolismo , Myoviridae/genética , Filogenia
4.
Mol Microbiol ; 110(4): 616-633, 2018 11.
Artículo en Inglés | MEDLINE | ID: mdl-30230632

RESUMEN

The carrier state is an alternative bacteriophage life cycle by which virulent bacteriophage can persist in association with host bacteria. Campylobacter jejuni carrier state strains exhibit growth phase dependent motility due to a truncated flagella phenotype. Genome sequencing identified a T368A substitution in the G3 domain of the SRP-like GTPase FlhF from C. jejuni PT14CP30A carrier state strains, which we hypothesized to be the cause of the complex motility phenotype. We have analyzed the role of this mutation in C. jejuni PT14 and demonstrated that flhF(T368A) leads to a large proportion of cells unable to synthesize flagella, while the remaining cells form a single flagellum at one pole leading to significantly reduced motility. The flhF(T368A) mutation causes a reduction in the phage adsorption constant, which leads to a decrease in infection efficiency. Down-regulation of σ28 and σ54 dependent flagellar genes were observed as responses to the flhF(T368A) mutation. FlhF(T368A) protein is impaired in GTPase activity and exhibits reduced stability. C. jejuni carrying flhF(T368A) are less sensitive to bacteriophage infection and formation of the carrier state. The acquisition of flhF(T368A) in carrier state strains acts to prevent super-infection and maintain association with the bacteriophage that provoked the interaction.


Asunto(s)
Proteínas Bacterianas/genética , Bacteriófagos/crecimiento & desarrollo , Campylobacter jejuni/genética , Campylobacter jejuni/virología , Flagelos/metabolismo , Locomoción/genética , Proteínas de Unión al GTP Monoméricas/genética , Bacteriófagos/genética , Campylobacter jejuni/fisiología , Flagelos/genética , Genoma Bacteriano/genética
5.
Microbiology (Reading) ; 163(6): 911-919, 2017 06.
Artículo en Inglés | MEDLINE | ID: mdl-28597819

RESUMEN

Phase variation (PV) creates phenotypic heterogeneity at high frequencies and in a reversible manner. This phenomenon allows bacteria to adapt to a variety of different environments and selective pressures. In Campylobacterjejuni this reversible adaptive process is mediated by mutations in homopolymeric G/C tracts. Many C. jejuni-specific phages are dependent on phase-variable surface structures for successful infection. We previously identified the capsular polysaccharide (CPS) moiety, MeOPN-GalfNAc, as a receptor for phage F336 and showed that phase-variable expression of the transferase for this CPS modification, cj1421, and two other phase-variable CPS genes generated phage resistance in C. jejuni. Here we investigate the population dynamics of C. jejuni NCTC11168 when exposed to phage F336 in vitro using a newly described method - the 28-locus-CJ11168 PV analysis. Dynamic switching was observed in the ON/OFF states of three phase-variable CPS genes, cj1421, cj1422 and cj1426, during phage F336 exposure, with the dominant phage-resistant phasotype differing between cultures. Although loss of the phage receptor was predominately observed, several other PV events also led to phage resistance, a phenomenon that increases the chance of phage-resistant subpopulations being present in any growing culture. No other PV genes were affected and exposure to phage F336 resulted in a highly specific response, only selecting for phase variants of cj1421, cj1422 and cj1426. In summary, C. jejuni may benefit from modification of the surface in multiple ways to inhibit or reduce phage binding, thereby ensuring the survival of the population when exposed to phages.


Asunto(s)
Bacteriófagos/fisiología , Campylobacter jejuni/crecimiento & desarrollo , Campylobacter jejuni/virología , Regulación Bacteriana de la Expresión Génica , Proteínas Bacterianas/genética , Proteínas Bacterianas/metabolismo , Bacteriófagos/genética , Campylobacter jejuni/genética , Campylobacter jejuni/metabolismo , Mutación
6.
BMC Genomics ; 17(1): 990, 2016 12 03.
Artículo en Inglés | MEDLINE | ID: mdl-27912729

RESUMEN

BACKGROUND: Whole genome sequencing (WGS) is useful for determining clusters of human cases, investigating outbreaks, and defining the population genetics of bacteria. It also provides information about other aspects of bacterial biology, including classical typing results, virulence, and adaptive strategies of the organism. Cell culture invasion and protein expression patterns of four related multilocus sequence type 21 (ST21) C. jejuni isolates from a significant Canadian water-borne outbreak were previously associated with the presence of a CJIE1 prophage. Whole genome sequencing was used to examine the genetic diversity among these isolates and confirm that previous observations could be attributed to differential prophage carriage. Moreover, we sought to determine the presence of genome sequences that could be used as surrogate markers to delineate outbreak-associated isolates. RESULTS: Differential carriage of the CJIE1 prophage was identified as the major genetic difference among the four outbreak isolates. High quality single-nucleotide variant (hqSNV) and core genome multilocus sequence typing (cgMLST) clustered these isolates within expanded datasets consisting of additional C. jejuni strains. The number and location of homopolymeric tract regions was identical in all four outbreak isolates but differed from all other C. jejuni examined. Comparative genomics and PCR amplification enabled the identification of large chromosomal inversions of approximately 93 kb and 388 kb within the outbreak isolates associated with transducer-like proteins containing long nucleotide repeat sequences. The 93-kb inversion was characteristic of the outbreak-associated isolates, and the gene content of this inverted region displayed high synteny with the reference strain. CONCLUSIONS: The four outbreak isolates were clonally derived and differed mainly in the presence of the CJIE1 prophage, validating earlier findings linking the prophage to phenotypic differences in virulence assays and protein expression. The identification of large, genetically syntenous chromosomal inversions in the genomes of outbreak-associated isolates provided a unique method for discriminating outbreak isolates from the background population. Transducer-like proteins appear to be associated with the chromosomal inversions. CgMLST and hqSNV analysis also effectively delineated the outbreak isolates within the larger C. jejuni population structure.


Asunto(s)
Infecciones por Campylobacter/microbiología , Campylobacter jejuni/genética , Genoma Bacteriano , Genómica , Infecciones por Campylobacter/epidemiología , Campylobacter jejuni/clasificación , Campylobacter jejuni/aislamiento & purificación , Campylobacter jejuni/virología , Canadá/epidemiología , Inversión Cromosómica , Cromosomas Bacterianos , Brotes de Enfermedades , Variación Genética , Genómica/métodos , Secuenciación de Nucleótidos de Alto Rendimiento , Humanos , Tipificación de Secuencias Multilocus , Filogenia , Plásmidos/genética , Profagos/genética , Análisis de Secuencia de ADN
7.
Mol Microbiol ; 95(1): 101-15, 2015 Jan.
Artículo en Inglés | MEDLINE | ID: mdl-25354466

RESUMEN

Bacteriophage receptor-binding proteins (RBPs) confer host specificity. We previously identified a putative RBP (Gp047) from the campylobacter lytic phage NCTC 12673 and demonstrated that Gp047 has a broader host range than its parent phage. While NCTC 12673 recognizes the capsular polysaccharide (CPS) of a limited number of Campylobacter jejuni isolates, Gp047 binds to a majority of C. jejuni and related Campylobacter coli strains. In this study, we demonstrate that Gp047 also binds to acapsular mutants, suggesting that unlike the parent phage, CPS is not the receptor for Gp047. Affinity chromatography and far-western analyses of C. jejuni lysates using Gp047 followed by mass spectrometry indicated that Gp047 binds to the major flagellin protein, FlaA. Because C. jejuni flagellin is extensively glycosylated, we investigated this binding specificity further and demonstrate that Gp047 only recognizes flagellin decorated with acetamidino-modified pseudaminic acid. This binding activity is localized to the C-terminal quarter of the protein and both wild-type and coccoid forms of C. jejuni are recognized. In addition, Gp047 treatment agglutinates vegetative cells and reduces their motility. Because Gp047 is highly conserved among all campylobacter phages sequenced to date, it is likely that this protein plays an important role in the phage life cycle.


Asunto(s)
Bacteriófagos/metabolismo , Campylobacter jejuni/virología , Flagelina/metabolismo , Proteínas Virales/genética , Proteínas Virales/metabolismo , Cápsulas Bacterianas/genética , Cápsulas Bacterianas/metabolismo , Bacteriófagos/genética , Campylobacter jejuni/genética , Campylobacter jejuni/metabolismo , Cromatografía de Afinidad , Secuencia Conservada , Glicosilación , Espectrometría de Masas , Mutación , Unión Proteica , Azúcares Ácidos/metabolismo
8.
Appl Environ Microbiol ; 80(22): 7096-106, 2014 Nov.
Artículo en Inglés | MEDLINE | ID: mdl-25261508

RESUMEN

Previous studies have identified a specific modification of the capsular polysaccharide as receptor for phages that infect Campylobacter jejuni. Using acapsular kpsM mutants of C. jejuni strains NCTC11168 and NCTC12658, we found that bacteriophage F341 infects C. jejuni independently of the capsule. In contrast, phage F341 does not infect C. jejuni NCTC11168 mutants that either lack the flagellar filaments (ΔflaAB) or that have paralyzed, i.e., nonrotating, flagella (ΔmotA and ΔflgP). Complementing flgP confirmed that phage F341 requires rotating flagella for successful infection. Furthermore, adsorption assays demonstrated that phage F341 does not adsorb to these nonmotile C. jejuni NCTC11168 mutants. Taken together, we propose that phage F341 uses the flagellum as a receptor. Phage-host interactions were investigated using fluorescence confocal and transmission electron microscopy. These data demonstrate that F341 binds to the flagellum by perpendicular attachment with visible phage tail fibers interacting directly with the flagellum. Our data are consistent with the movement of the C. jejuni flagellum being required for F341 to travel along the filament to reach the basal body of the bacterium. The initial binding to the flagellum may cause a conformational change of the phage tail that enables DNA injection after binding to a secondary receptor.


Asunto(s)
Bacteriófagos/fisiología , Campylobacter jejuni/citología , Campylobacter jejuni/virología , Flagelos/virología , Proteínas Bacterianas/genética , Proteínas Bacterianas/metabolismo , Campylobacter jejuni/genética , Campylobacter jejuni/fisiología
9.
BMC Microbiol ; 14: 70, 2014 Mar 19.
Artículo en Inglés | MEDLINE | ID: mdl-24641125

RESUMEN

BACKGROUND: The presence of Campylobacter jejuni temperate bacteriophages has increasingly been associated with specific biological effects. It has recently been demonstrated that the presence of the prophage CJIE1 is associated with increased adherence and invasion of C. jejuni isolates in cell culture assays. RESULTS: Quantitative comparative proteomics experiments were undertaken using three closely related isolates with CJIE1 and one isolate without CJIE1 to determine whether there was a corresponding difference in protein expression levels. Initial experiments indicated that about 2% of the total proteins characterized were expressed at different levels in isolates with or without the prophage. Some of these proteins regulated by the presence of CJIE1 were associated with virulence or regulatory functions. Additional experiments were conducted using C. jejuni isolates with and without CJIE1 grown on four different media: Mueller Hinton (MH) media containing blood; MH media containing 0.1% sodium deoxycholate, which is thought to result in increased expression of virulence proteins; MH media containing 2.5% Oxgall; and MHwithout additives. These experiments provided further evidence that CJIE1 affected protein expression, including virulence-associated proteins. They also demonstrated a general bile response involving a majority of the proteome and clearly showed the induction of almost all proteins known to be involved with iron acquisition. The data have been deposited to the ProteomeXchange with identifiers PXD000798, PXD000799, PXD000800, and PXD000801. CONCLUSION: The presence of the CJIE1 prophage was associated with differences in protein expression levels under different conditions. Further work is required to determine what genes are involved in causing this phenomenon.


Asunto(s)
Proteínas Bacterianas/biosíntesis , Ácidos y Sales Biliares/metabolismo , Campylobacter jejuni/metabolismo , Campylobacter jejuni/virología , Regulación Bacteriana de la Expresión Génica , Profagos/genética , Proteínas Bacterianas/genética , Medios de Cultivo/química , ADN Bacteriano/química , ADN Bacteriano/genética , Datos de Secuencia Molecular , Proteoma/análisis , Análisis de Secuencia de ADN
10.
Sci Rep ; 14(1): 9218, 2024 04 22.
Artículo en Inglés | MEDLINE | ID: mdl-38649444

RESUMEN

For reducing Campylobacter (C.) in the food production chain and thus the risk to the consumer, the combined application of different measures as a multiple-hurdle approach is currently under discussion. This is the first study to investigate possible synergistic activities in vivo, aiming at reducing intestinal C. jejuni counts by administering (i) bacteriophages (phages) in combination with a competitive exclusion (CE) product and (ii) carvacrol combined with organic acids. The combined application of the two selected phages (Fletchervirus phage NCTC 12673 and Firehammervirus phage vB_CcM-LmqsCPL1/1) and the CE product significantly reduced C. jejuni loads by 1.0 log10 in cecal and colonic contents as well as in cloacal swabs at the end of the trial (33 and 34 days post hatch). The proportion of bacterial isolates showing reduced phage susceptibility ranged from 10.9% (isolates from cecal content) to 47.8% (isolates from cloacal swabs 32 days post hatch) for the Fletchervirus phage, while all tested isolates remained susceptible to the Firehammervirus phage. The use of carvacrol combined with an organic acid blend (sorbic acid, benzoic acid, propionic acid, and acetic acid) significantly reduced Campylobacter counts by 1.0 log10 in cloacal swabs on day 30 only.


Asunto(s)
Bacteriófagos , Pollos , Cimenos , Cimenos/farmacología , Animales , Bacteriófagos/fisiología , Pollos/microbiología , Infecciones por Campylobacter/prevención & control , Infecciones por Campylobacter/microbiología , Enfermedades de las Aves de Corral/microbiología , Enfermedades de las Aves de Corral/prevención & control , Enfermedades de las Aves de Corral/virología , Campylobacter jejuni/virología , Campylobacter jejuni/efectos de los fármacos , Campylobacter/efectos de los fármacos , Campylobacter/virología
11.
Biochem Soc Trans ; 41(6): 1475-81, 2013 Dec.
Artículo en Inglés | MEDLINE | ID: mdl-24256240

RESUMEN

The continuous battle for survival in the environment has led to the development or acquisition of sophisticated defence systems in bacteria. These defence systems have contributed to the survival of the bacterial species in the environment for millions of years. Some systems appear to have evolved in a number of pathogenic bacteria towards a role in virulence and host immune evasion. Recently, different bacterial cell envelope components from diverse bacterial species have been linked not only to bacteriophage defence, but also to virulence features. In the present review we focus specifically on the bacterial cell envelope-expressed sialic-acid-containing LOS (lipo-oligosaccharide) structures and Type II CRISPR (clustered regularly interspaced short palindromic repeats)-Cas (CRISPR-associated) genes that both occur in specific Gram-negative pathogens. In Campylobacter jejuni circumstantial evidence points at a potential intertwined dual function between sialylated LOS structures and subtype II-C CRISPR-Cas, i.e. in phage defence and virulence. In the present review we discuss whether a dual functionality of sialylated LOS and subtype II-C CRISPR-Cas is exclusive to C. jejuni only or could be more widespread within the group of Type II CRISPR-Cas-harbouring bacteria. We conclude from the literature that, at least in C. jejuni, circumstantial evidence exists for a complex intertwined dual functionality between sialylated LOS and Type II CRISPR-Cas, and that other bacteria show similar genomic signatures.


Asunto(s)
Bacteriófagos/inmunología , Bacteriófagos/patogenicidad , Campylobacter jejuni/inmunología , Campylobacter jejuni/virología , Bacteriófagos/genética , Sistemas CRISPR-Cas/genética , Campylobacter jejuni/genética , Campylobacter jejuni/metabolismo , Lipopolisacáridos/química , Lipopolisacáridos/metabolismo , Virulencia
12.
Appl Environ Microbiol ; 79(23): 7525-33, 2013 Dec.
Artículo en Inglés | MEDLINE | ID: mdl-24077703

RESUMEN

Campylobacteriosis is the most frequent food-borne human enteritis. The major source for infection with Campylobacter spp. is broiler meat. Risk assessments consider the reduction of Campylobacter in primary production to be most beneficial for human health. The aim of this study was to test the efficacy of a bacteriophage application under commercial conditions which had proved to be effective in previous noncommercial studies under controlled experimental conditions. A phage cocktail for Campylobacter reduction was tested on three commercial broiler farms each with a control and an experimental group. Colonization of Campylobacter was confirmed prior to phage application in fecal samples. Subsequently, a phage cocktail was applied via drinking water in the experimental group (log10 5.8 to 7.5 PFU/bird). One day after phage application, Campylobacter counts of one experimental group were reduced under the detection limit (<50 CFU/g, P=0.0140) in fecal samples. At slaughter, a significant reduction of >log10 3.2 CFU/g cecal content compared to the control was still detected (P=0.0011). No significant reduction was observed in the experimental groups of the other trials. However, a significant drop in cecal Campylobacter counts occurred in a phage-contaminated control. These results suggest that maximum reduction of Campylobacter at the slaughterhouse might be achieved by phage application 1 to 4 days prior to slaughter.


Asunto(s)
Carga Bacteriana , Bacteriófagos/crecimiento & desarrollo , Terapia Biológica/métodos , Infecciones por Campylobacter/terapia , Infecciones por Campylobacter/veterinaria , Campylobacter jejuni/aislamiento & purificación , Campylobacter jejuni/virología , Infecciones por Campylobacter/microbiología , Portador Sano/microbiología , Portador Sano/terapia , Portador Sano/veterinaria , Heces/microbiología , Resultado del Tratamiento
13.
Eur J Clin Microbiol Infect Dis ; 32(2): 207-26, 2013 Feb.
Artículo en Inglés | MEDLINE | ID: mdl-22945471

RESUMEN

Guillain-Barré syndrome (GBS) is a post-infectious disease in which the human peripheral nervous system is affected after infection by specific pathogenic bacteria, including Campylobacter jejuni. GBS is suggested to be provoked by molecular mimicry between sialylated lipooligosaccharide (LOS) structures on the cell envelope of these bacteria and ganglioside epitopes on the human peripheral nerves, resulting in autoimmune-driven nerve destruction. Earlier, the C. jejuni sialyltransferase (Cst-II) was found to be linked to GBS and demonstrated to be involved in the biosynthesis of the ganglioside-like LOS structures. Apart from a role in pathogenicity, we report here that Cst-II-generated ganglioside-like LOS structures confer efficient bacteriophage resistance in C. jejuni. By bioinformatic analysis, it is revealed that the presence of sialyltransferases in C. jejuni and other potential GBS-related pathogens correlated significantly with the apparent degeneration of an alternative anti-virus system: type II Clusters of Regularly Interspaced Short Palindromic Repeat and associated genes (CRISPR-Cas). Molecular analysis of the C. jejuni CRISPR-Cas system confirmed the bioinformatic investigation. CRISPR degeneration and mutations in the cas genes cas2, cas1 and csn1 were found to correlate with Cst-II sialyltransferase presence (p < 0.0001). Remarkably, type II CRISPR-Cas systems are mainly found in mammalian pathogens. To study the potential involvement of this system in pathogenicity, we inactivated the type II CRISPR-Cas marker gene csn1, which effectively reduced virulence in primarily cst-II-positive C. jejuni isolates. Our findings indicate a novel link between viral defence, virulence and GBS in a pathogenic bacterium.


Asunto(s)
Bacteriófagos/crecimiento & desarrollo , Infecciones por Campylobacter/complicaciones , Campylobacter jejuni/patogenicidad , Gangliósidos/metabolismo , Síndrome de Guillain-Barré/microbiología , Factores de Virulencia/metabolismo , Infecciones por Campylobacter/inmunología , Infecciones por Campylobacter/microbiología , Campylobacter jejuni/genética , Campylobacter jejuni/inmunología , Campylobacter jejuni/virología , Biología Computacional , ADN Bacteriano/genética , Gangliósidos/inmunología , Humanos , Factores de Virulencia/inmunología
14.
J Virol ; 85(17): 8597-605, 2011 Sep.
Artículo en Inglés | MEDLINE | ID: mdl-21697478

RESUMEN

CP81 is a virulent Campylobacter group III phage whose linear genome comprises 132,454 bp. At the nucleotide level, CP81 differs from other phages. However, a number of its structural and replication/recombination proteins revealed a relationship to the group II Campylobacter phages CP220/CPt10 and to T4-type phages. Unlike the T4-related phages, the CP81 genome does not contain conserved replication and virion modules. Instead, the respective genes are scattered throughout the phage genome. Moreover, most genes for metabolic enzymes of CP220/CPt10 are lacking in CP81. On the other hand, the CP81 genome contains nine similar genes for homing endonucleases which may be involved in the attrition of the conserved gene order for the virion core genes of T4-type phages. The phage apparently possesses an unusual modification of C or G bases. Efficient cleavage of its DNA was only achieved with restriction enzymes recognizing pure A/T sites. Uncommonly, phenol extraction leads to a significant loss of CP81 DNA from the aqueous layer, a property not yet described for other phages belonging to the T4 superfamily.


Asunto(s)
Bacteriófagos/genética , Campylobacter jejuni/virología , Genes Virales , Myoviridae/genética , Bacteriófago T4/genética , Bacteriófagos/aislamiento & purificación , ADN Viral/química , ADN Viral/genética , Orden Génico , Humanos , Datos de Secuencia Molecular , Myoviridae/aislamiento & purificación , Análisis de Secuencia de ADN , Homología de Secuencia de Aminoácido
15.
BMC Microbiol ; 12: 269, 2012 Nov 20.
Artículo en Inglés | MEDLINE | ID: mdl-23167543

RESUMEN

BACKGROUND: Prophages of enteric bacteria are frequently of key importance for the biology, virulence, or host adaptation of their host. Some C. jejuni isolates carry homologs of the CJIE1 (CMLP 1) prophage that carry cargo genes potentially involved in virulence. Possible role(s) of CJIE1 homologs in the biology and virulence of C. jejuni were therefore investigated by using in vitro cell culture assays and by assessing the association of C. jejuni isolates with and without these prophages with patients' symptoms, with source, and with clonal lineages within the C. jejuni population. RESULTS: Four C. jejuni isolates, three carrying the CJIE1-like prophage and one without, were tested in cell culture assays for adherence and invasion. Both adherence and invasion of C. jejuni to cells in culture were increased by the presence of the CJIE1-family prophage. Differences in motility and growth rate did not appear to be responsible. The CJIE1 prophage was present in 23% of isolates from human and non-human sources combined that were obtained through sentinel-site surveillance, and the distribution of CJIE1 in this population showed modest clonal associations. There was no correlation between the presence of the CJIE1 prophage in C. jejuni and patient symptoms, although there was some statistical support for lower rates of abdominal pain and fever when the prophage was present. Little evidence was found for a role of the prophage in host adaptation or host specificity. CONCLUSION: These biological effects suggest that the presence of the prophage may be a marker for differential virulence of some C. jejuni isolates. Ongoing research into the effects of the prophage on protein expression may provide additional insights into the roles the prophage may play in the biology of its host bacterium.


Asunto(s)
Infecciones por Campylobacter/microbiología , Infecciones por Campylobacter/veterinaria , Campylobacter jejuni/patogenicidad , Campylobacter jejuni/virología , Profagos/genética , Animales , Adhesión Bacteriana , Técnicas de Tipificación Bacteriana , Infecciones por Campylobacter/patología , Línea Celular , Células Epiteliales/microbiología , Humanos , Virulencia
16.
J Bacteriol ; 193(23): 6742-9, 2011 Dec.
Artículo en Inglés | MEDLINE | ID: mdl-21965558

RESUMEN

Bacteriophages infecting the food-borne human pathogen Campylobacter jejuni could potentially be exploited to reduce bacterial counts in poultry prior to slaughter. This bacterium colonizes the intestinal tract of poultry in high numbers, and contaminated poultry meat is regarded as the major source of human campylobacteriosis. In this study, we used phage F336 belonging to the Myoviridae family to select a C. jejuni NCTC11168 phage-resistant strain, called 11168R, with the aim of investigating the mechanisms of phage resistance. We found that phage F336 has reduced adsorption to 11168R, thus indicating that the receptor is altered. While proteinase K-treated C. jejuni cells did not affect adsorption, periodate treatment resulted in reduced adsorption, suggesting that the phage binds to a carbohydrate moiety. Using high-resolution magic angle spinning nuclear magnetic resonance (NMR) spectroscopy, we found that 11168R lacks an O-methyl phosphoramidate (MeOPN) moiety attached to the GalfNAc on the capsular polysaccharide (CPS), which was further confirmed by mass spectroscopy. Sequence analysis of 11168R showed that the potentially hypervariable gene cj1421, which encodes the GalfNAc MeOPN transferase, contains a tract of 10 Gs, resulting in a nonfunctional gene product. However, when 11168R reverted back to phage sensitive, cj1421 contained 9 Gs, and the GalfNAc MeOPN was regained in this strain. In summary, we have identified the phase-variable MeOPN moiety, a common component of the diverse capsular polysaccharides of C. jejuni, as a novel receptor of phages infecting this bacterium.


Asunto(s)
Amidas/metabolismo , Cápsulas Bacterianas/metabolismo , Campylobacter jejuni/metabolismo , Campylobacter jejuni/virología , Myoviridae/fisiología , Ácidos Fosfóricos/metabolismo , Receptores Virales/metabolismo , Acoplamiento Viral , Amidas/química , Cápsulas Bacterianas/química , Cápsulas Bacterianas/genética , Proteínas Bacterianas/genética , Proteínas Bacterianas/metabolismo , Infecciones por Campylobacter/microbiología , Campylobacter jejuni/química , Campylobacter jejuni/genética , Humanos , Ácidos Fosfóricos/química , Receptores Virales/química
17.
Appl Environ Microbiol ; 77(23): 8265-71, 2011 Dec.
Artículo en Inglés | MEDLINE | ID: mdl-21965409

RESUMEN

Campylobacter jejuni continues to be the leading cause of bacterial food-borne illness worldwide, so improvements to current methods used for bacterial detection and disease prevention are needed. We describe here the genome and proteome of C. jejuni bacteriophage NCTC 12673 and the exploitation of its receptor-binding protein for specific bacterial detection. Remarkably, the 135-kb Myoviridae genome of NCTC 12673 differs greatly from any other proteobacterial phage genome described (including C. jejuni phages CP220 and CPt10) and instead shows closest homology to the cyanobacterial T4-related myophages. The phage genome contains 172 putative open reading frames, including 12 homing endonucleases, no visible means of packaging, and a putative trans-splicing intein. The phage DNA appears to be strongly associated with a protein that interfered with PCR amplification and estimation of the phage genome mass by pulsed-field gel electrophoresis. Identification and analyses of the receptor-binding protein (Gp48) revealed features common to the Salmonella enterica P22 phage tailspike protein, including the ability to specifically recognize a host organism. Bacteriophage receptor-binding proteins may offer promising alternatives for use in pathogen detection platforms.


Asunto(s)
Bacteriófagos/química , Bacteriófagos/genética , Campylobacter jejuni/virología , Genes Virales , Genoma Viral , Proteoma/análisis , Proteínas Virales/análisis , ADN Viral/química , ADN Viral/genética , Datos de Secuencia Molecular , Myoviridae/química , Myoviridae/genética , Sistemas de Lectura Abierta , Análisis de Secuencia de ADN
18.
Appl Environ Microbiol ; 77(10): 3320-6, 2011 May.
Artículo en Inglés | MEDLINE | ID: mdl-21441325

RESUMEN

Bacteria in their natural environments frequently exist as mixed surface-associated communities, protected by extracellular material, termed biofilms. Biofilms formed by the human pathogen Campylobacter jejuni may arise in the gastrointestinal tract of animals but also in water pipes and other industrial situations, leading to their possible transmission into the human food chain either directly or via farm animals. Bacteriophages are natural predators of bacteria that usually kill their prey by cell lysis and have potential application for the biocontrol and dispersal of target bacteria in biofilms. The effects of virulent Campylobacter specific-bacteriophages CP8 and CP30 on C. jejuni biofilms formed on glass by strains NCTC 11168 and PT14 at 37°C under microaerobic conditions were investigated. Independent bacteriophage treatments (n ≥ 3) led to 1 to 3 log10 CFU/cm² reductions in the viable count 24 h postinfection compared with control levels. In contrast, bacteriophages applied under these conditions effected a reduction of less than 1 log10 CFU/ml in planktonic cells. Resistance to bacteriophage in bacteria surviving bacteriophage treatment of C. jejuni NCTC 11168 biofilms was 84% and 90% for CP8 and CP30, respectively, whereas bacteriophage resistance was not found in similarly recovered C. jejuni PT14 cells. Dispersal of the biofilm matrix by bacteriophage was demonstrated by crystal violet staining and transmission electron microscopy. Bacteriophage may play an important role in the control of attachment and biofilm formation by Campylobacter in situations where biofilms occur in nature, and they have the potential for application in industrial situations leading to improvements in food safety.


Asunto(s)
Bacteriólisis , Bacteriófagos/crecimiento & desarrollo , Biopelículas/crecimiento & desarrollo , Campylobacter jejuni/crecimiento & desarrollo , Campylobacter jejuni/virología , Viabilidad Microbiana
19.
Analyst ; 136(22): 4780-6, 2011 Nov 21.
Artículo en Inglés | MEDLINE | ID: mdl-21955997

RESUMEN

Campylobacter jejuni is found in the intestines of poultry, cattle, swine, wild birds and pet animals and is the major cause of foodborne gastroenteritis in developed countries. We report the use of the receptor binding protein (RBP) of Campylobacter bacteriophage NCTC 12673 for the specific capture of Campylobacter jejuni bacteria using RBP-derivatized capturing surfaces. The Gp48 RBP was expressed as a glutathione S-transferase-Gp48 (GST-Gp48) fusion protein and immobilized onto surface plasmon resonance (SPR) surfaces using glutathione self-assembled monolayers (GSH SAM). Bovine serum albumin (BSA) was used to block any non-specific binding. Glutathione SAM leads to an oriented attachment of the protein, resulting in a two- to three-fold improvement of bacterial capture when compared to dithiobis(succinimidyl propionate) (DTSP) SAM-based unoriented attachment. The specificity of recognition was confirmed using Salmonella enterica subsp. enterica serovar Typhimurium as a negative control, which indeed showed negligible binding. The detection limit of the RBP-derivatized SPR surfaces was found to be 10(2) cfu/ml. Finally, GST-Gp48 was also immobilized onto magnetic beads that were successfully used to capture and pre-concentrate the host pathogen from suspension.


Asunto(s)
Bacteriófagos , Campylobacter jejuni/aislamiento & purificación , Campylobacter jejuni/virología , Sondas Moleculares/metabolismo , Resonancia por Plasmón de Superficie/métodos , Proteínas Virales/metabolismo , Animales , Campylobacter jejuni/metabolismo , Bovinos , Proteínas Inmovilizadas/química , Proteínas Inmovilizadas/metabolismo , Microesferas , Sondas Moleculares/química , Proteínas Recombinantes de Fusión/química , Proteínas Recombinantes de Fusión/metabolismo , Proteínas Virales/química
20.
Can J Microbiol ; 57(10): 795-808, 2011 Oct.
Artículo en Inglés | MEDLINE | ID: mdl-21939376

RESUMEN

Bacteriophages capable of integrating into host bacterial genomes as prophages affect the biology and virulence of their bacterial hosts. Previously, partial sequencing of 12 prophages similar to CJIE1 from Campylobacter jejuni RM1221 did not show the presence of inserted nonphage genes. Therefore, four of these prophages were sequenced completely, and indels were found in at least two different regions of the prophage genome. Putative proteins from one indel appeared to be members of two new families of proteins, with proteins within each family related to each other by a common domain. Further heterogeneity was found adjacent to the CJE0270 homolog, creating difficulty locating the end of the prophage on this side and in determining the composition of the core prophage. These prophages appear to comprise a family that has heterogeneity in gene content resulting from insertion or deletion of additional genes at three locations in their genomes. In addition, members of the CJIE1 phage family may differ somewhat in their biology from phage Mu. Further investigations of these Campylobacter prophages can be expected to provide interesting insights into the biology of the phages themselves and into the role of these phages in the biology of their hosts.


Asunto(s)
Bacteriófagos/genética , Campylobacter jejuni/virología , ADN Viral/química , ADN Viral/genética , Genoma Viral , Genes Virales , Mutación INDEL , Profagos/genética , Análisis de Secuencia de ADN
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