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1.
Nature ; 632(8026): 802-807, 2024 Aug.
Artículo en Inglés | MEDLINE | ID: mdl-39169247

RESUMEN

Low-latitude (LL) oceans account for up to half of global net primary production and export1-5. It has been argued that the Southern Ocean dominates LL primary production and export6, with implications for the response of global primary production and export to climate change7. Here we applied observational analyses and sensitivity studies to an individual model to show, instead, that 72% of LL primary production and 55% of export is controlled by local mesopelagic macronutrient cycling. A total of 34% of the LL export is sustained by preformed macronutrients supplied from the Southern Ocean via a deeper overturning cell, with a shallow preformed northward supply, crossing 30° S through subpolar and thermocline water masses, sustaining only 7% of the LL export. Analyses of five Coupled Model Intercomparison Project Phase 6 (CMIP6) models, run under both high-emissions low-mitigation (shared socioeconomic pathway (SSP5-8.5)) and low-emissions high-mitigation (SSP1-2.6) climate scenarios for 1850-2300, revealed significant across-model disparities in their projections of not only the amplitude, but also the sign, of LL primary production. Under the stronger SSP5-8.5 forcing, with more substantial upper-ocean warming, the CMIP6 models that account for temperature-dependent remineralization promoted enhanced LL mesopelagic nutrient retention under warming, with this providing a first-order contribution to stabilizing or increasing, rather than decreasing, LL production under high emissions and low mitigation. This underscores the importance of a mechanistic understanding of mesopelagic remineralization and its sensitivity to ocean warming for predicting future ecosystem changes.


Asunto(s)
Organismos Acuáticos , Ecosistema , Nutrientes , Océanos y Mares , Agua de Mar , Movimientos del Agua , Calentamiento Global , Nutrientes/metabolismo , Fitoplancton/metabolismo , Agua de Mar/química , Temperatura , Clima Tropical , Organismos Acuáticos/metabolismo , Movimiento (Física)
2.
Nature ; 633(8030): 587-593, 2024 Sep.
Artículo en Inglés | MEDLINE | ID: mdl-39261723

RESUMEN

The biological pump supplies carbon to the oceans' interior, driving long-term carbon sequestration and providing energy for deep-sea ecosystems1,2. Its efficiency is set by transformations of newly formed particles in the euphotic zone, followed by vertical flux attenuation via mesopelagic processes3. Depth attenuation of the particulate organic carbon (POC) flux is modulated by multiple processes involving zooplankton and/or microbes4,5. Nevertheless, it continues to be mainly parameterized using an empirically derived relationship, the 'Martin curve'6. The derived power-law exponent is the standard metric used to compare flux attenuation patterns across oceanic provinces7,8. Here we present in situ experimental findings from C-RESPIRE9, a dual particle interceptor and incubator deployed at multiple mesopelagic depths, measuring microbially mediated POC flux attenuation. We find that across six contrasting oceanic regimes, representing a 30-fold range in POC flux, degradation by particle-attached microbes comprised 7-29 per cent of flux attenuation, implying a more influential role for zooplankton in flux attenuation. Microbial remineralization, normalized to POC flux, ranged by 20-fold across sites and depths, with the lowest rates at high POC fluxes. Vertical trends, of up to threefold changes, were linked to strong temperature gradients at low-latitude sites. In contrast, temperature played a lesser role at mid- and high-latitude sites, where vertical trends may be set jointly by particle biochemistry, fragmentation and microbial ecophysiology. This deconstruction of the Martin curve reveals the underpinning mechanisms that drive microbially mediated POC flux attenuation across oceanic provinces.


Asunto(s)
Organismos Acuáticos , Ciclo del Carbono , Carbono , Ecosistema , Océanos y Mares , Agua de Mar , Animales , Carbono/metabolismo , Secuestro de Carbono , Agua de Mar/química , Agua de Mar/microbiología , Zooplancton/metabolismo , Temperatura , Organismos Acuáticos/metabolismo
3.
Nature ; 630(8015): 230-236, 2024 Jun.
Artículo en Inglés | MEDLINE | ID: mdl-38811725

RESUMEN

Nitrosopumilus maritimus is an ammonia-oxidizing archaeon that is crucial to the global nitrogen cycle1,2. A critical step for nitrogen oxidation is the entrapment of ammonium ions from a dilute marine environment at the cell surface and their subsequent channelling to the cell membrane of N. maritimus. Here we elucidate the structure of the molecular machinery responsible for this process, comprising the surface layer (S-layer), using electron cryotomography and subtomogram averaging from cells. We supplemented our in situ structure of the ammonium-binding S-layer array with a single-particle electron cryomicroscopy structure, revealing detailed features of this immunoglobulin-rich and glycan-decorated S-layer. Biochemical analyses showed strong ammonium binding by the cell surface, which was lost after S-layer disassembly. Sensitive bioinformatic analyses identified similar S-layers in many ammonia-oxidizing archaea, with conserved sequence and structural characteristics. Moreover, molecular simulations and structure determination of ammonium-enriched specimens enabled us to examine the cation-binding properties of the S-layer, revealing how it concentrates ammonium ions on its cell-facing side, effectively acting as a multichannel sieve on the cell membrane. This in situ structural study illuminates the biogeochemically essential process of ammonium binding and channelling, common to many marine microorganisms that are fundamental to the nitrogen cycle.


Asunto(s)
Amoníaco , Organismos Acuáticos , Archaea , Membrana Celular , Amoníaco/química , Amoníaco/metabolismo , Organismos Acuáticos/química , Organismos Acuáticos/metabolismo , Organismos Acuáticos/ultraestructura , Archaea/química , Archaea/metabolismo , Archaea/ultraestructura , Cationes/química , Cationes/metabolismo , Microscopía por Crioelectrón , Modelos Moleculares , Oxidación-Reducción , Polisacáridos/metabolismo , Polisacáridos/química
4.
Nature ; 634(8034): 721-728, 2024 Oct.
Artículo en Inglés | MEDLINE | ID: mdl-39261732

RESUMEN

SAR11 bacteria are the most abundant microorganisms in the surface ocean1 and have global biogeochemical importance2-4. To thrive in their competitive oligotrophic environment, these bacteria rely heavily on solute-binding proteins that facilitate uptake of specific substrates via membrane transporters5,6. The functions and properties of these transport proteins are key factors in the assimilation of dissolved organic matter and biogeochemical cycling of nutrients in the ocean, but they have remained largely inaccessible to experimental investigation. Here we performed genome-wide experimental characterization of all solute-binding proteins in a prototypical SAR11 bacterium, revealing specific functions and general trends in their properties that contribute to the success of SAR11 bacteria in oligotrophic environments. We found that the solute-binding proteins of SAR11 bacteria have extremely high binding affinity (dissociation constant >20 pM) and high binding specificity, revealing molecular mechanisms of oligotrophic adaptation. Our functional data have uncovered new carbon sources for SAR11 bacteria and enable accurate biogeographical analysis of SAR11 substrate uptake capabilities throughout the ocean. This study provides a comprehensive view of the substrate uptake capabilities of ubiquitous marine bacteria, providing a necessary foundation for understanding their contribution to assimilation of dissolved organic matter in marine ecosystems.


Asunto(s)
Organismos Acuáticos , Bacterias , Proteínas Bacterianas , Proteínas Portadoras , Organismos Acuáticos/genética , Organismos Acuáticos/metabolismo , Bacterias/genética , Bacterias/metabolismo , Proteínas Bacterianas/genética , Proteínas Bacterianas/metabolismo , Carbono/metabolismo , Proteínas Portadoras/genética , Proteínas Portadoras/metabolismo , Genoma Bacteriano/genética , Proteínas de Transporte de Membrana/genética , Proteínas de Transporte de Membrana/metabolismo , Océanos y Mares , Unión Proteica , Agua de Mar/microbiología , Agua de Mar/química , Especificidad por Sustrato , Compuestos Orgánicos/metabolismo , Filogeografía
5.
Nature ; 619(7971): 782-787, 2023 Jul.
Artículo en Inglés | MEDLINE | ID: mdl-37438520

RESUMEN

Many communities in low- and middle-income countries globally lack sustainable, cost-effective and mutually beneficial solutions for infectious disease, food, water and poverty challenges, despite their inherent interdependence1-7. Here we provide support for the hypothesis that agricultural development and fertilizer use in West Africa increase the burden of the parasitic disease schistosomiasis by fuelling the growth of submerged aquatic vegetation that chokes out water access points and serves as habitat for freshwater snails that transmit Schistosoma parasites to more than 200 million people globally8-10. In a cluster randomized controlled trial (ClinicalTrials.gov: NCT03187366) in which we removed invasive submerged vegetation from water points at 8 of 16 villages (that is, clusters), control sites had 1.46 times higher intestinal Schistosoma infection rates in schoolchildren and lower open water access than removal sites. Vegetation removal did not have any detectable long-term adverse effects on local water quality or freshwater biodiversity. In feeding trials, the removed vegetation was as effective as traditional livestock feed but 41 to 179 times cheaper and converting the vegetation to compost provided private crop production and total (public health plus crop production benefits) benefit-to-cost ratios as high as 4.0 and 8.8, respectively. Thus, the approach yielded an economic incentive-with important public health co-benefits-to maintain cleared waterways and return nutrients captured in aquatic plants back to agriculture with promise of breaking poverty-disease traps. To facilitate targeting and scaling of the intervention, we lay the foundation for using remote sensing technology to detect snail habitats. By offering a rare, profitable, win-win approach to addressing food and water access, poverty alleviation, infectious disease control and environmental sustainability, we hope to inspire the interdisciplinary search for planetary health solutions11 to the many and formidable, co-dependent global grand challenges of the twenty-first century.


Asunto(s)
Agricultura , Ecosistema , Salud Rural , Esquistosomiasis , Caracoles , Animales , Niño , Humanos , Esquistosomiasis/epidemiología , Esquistosomiasis/prevención & control , Esquistosomiasis/transmisión , Caracoles/parasitología , África Occidental , Fertilizantes , Especies Introducidas , Intestinos/parasitología , Agua Dulce , Plantas/metabolismo , Biodiversidad , Alimentación Animal , Calidad del Agua , Producción de Cultivos/métodos , Salud Pública , Pobreza/prevención & control , Organismos Acuáticos/metabolismo , Tecnología de Sensores Remotos
6.
Nature ; 615(7951): 265-269, 2023 03.
Artículo en Inglés | MEDLINE | ID: mdl-36813968

RESUMEN

Calcium carbonate formation is the primary pathway by which carbon is returned from the ocean-atmosphere system to the solid Earth1,2. The removal of dissolved inorganic carbon from seawater by precipitation of carbonate minerals-the marine carbonate factory-plays a critical role in shaping marine biogeochemical cycling1,2. A paucity of empirical constraints has led to widely divergent views on how the marine carbonate factory has changed over time3-5. Here we use geochemical insights from stable strontium isotopes to provide a new perspective on the evolution of the marine carbonate factory and carbonate mineral saturation states. Although the production of carbonates in the surface ocean and in shallow seafloor settings have been widely considered the predominant carbonate sinks for most of the history of the Earth6, we propose that alternative processes-such as porewater production of authigenic carbonates-may have represented a major carbonate sink throughout the Precambrian. Our results also suggest that the rise of the skeletal carbonate factory decreased seawater carbonate saturation states.


Asunto(s)
Carbonatos , Sedimentos Geológicos , Agua de Mar , Animales , Organismos Acuáticos/química , Organismos Acuáticos/metabolismo , Carbonato de Calcio/análisis , Carbonato de Calcio/química , Carbonato de Calcio/metabolismo , Carbono/análisis , Carbono/química , Carbono/metabolismo , Secuestro de Carbono , Carbonatos/análisis , Carbonatos/química , Carbonatos/metabolismo , Sedimentos Geológicos/análisis , Sedimentos Geológicos/química , Agua de Mar/análisis , Agua de Mar/química , Isótopos de Estroncio , Historia Antigua
7.
Nature ; 615(7952): 535-540, 2023 03.
Artículo en Inglés | MEDLINE | ID: mdl-36859551

RESUMEN

Energy transfer from light-harvesting ketocarotenoids to the light-driven proton pump xanthorhodopsins has been previously demonstrated in two unique cases: an extreme halophilic bacterium1 and a terrestrial cyanobacterium2. Attempts to find carotenoids that bind and transfer energy to abundant rhodopsin proton pumps3 from marine photoheterotrophs have thus far failed4-6. Here we detected light energy transfer from the widespread hydroxylated carotenoids zeaxanthin and lutein to the retinal moiety of xanthorhodopsins and proteorhodopsins using functional metagenomics combined with chromophore extraction from the environment. The light-harvesting carotenoids transfer up to 42% of the harvested energy in the violet- or blue-light range to the green-light absorbing retinal chromophore. Our data suggest that these antennas may have a substantial effect on rhodopsin phototrophy in the world's lakes, seas and oceans. However, the functional implications of our findings are yet to be discovered.


Asunto(s)
Organismos Acuáticos , Procesos Fototróficos , Bombas de Protones , Rodopsinas Microbianas , Organismos Acuáticos/metabolismo , Organismos Acuáticos/efectos de la radiación , Bacterias/metabolismo , Bacterias/efectos de la radiación , Carotenoides/metabolismo , Color , Cianobacterias/metabolismo , Cianobacterias/efectos de la radiación , Procesos Heterotróficos/efectos de la radiación , Luz , Océanos y Mares , Procesos Fototróficos/efectos de la radiación , Bombas de Protones/metabolismo , Bombas de Protones/efectos de la radiación , Rodopsinas Microbianas/metabolismo , Rodopsinas Microbianas/efectos de la radiación , Zeaxantinas/metabolismo , Zeaxantinas/efectos de la radiación , Luteína/metabolismo , Luteína/efectos de la radiación , Metagenoma , Lagos
8.
Nature ; 618(7966): 767-773, 2023 Jun.
Artículo en Inglés | MEDLINE | ID: mdl-37286610

RESUMEN

Eukaryotic life appears to have flourished surprisingly late in the history of our planet. This view is based on the low diversity of diagnostic eukaryotic fossils in marine sediments of mid-Proterozoic age (around 1,600 to 800 million years ago) and an absence of steranes, the molecular fossils of eukaryotic membrane sterols1,2. This scarcity of eukaryotic remains is difficult to reconcile with molecular clocks that suggest that the last eukaryotic common ancestor (LECA) had already emerged between around 1,200 and more than 1,800 million years ago. LECA, in turn, must have been preceded by stem-group eukaryotic forms by several hundred million years3. Here we report the discovery of abundant protosteroids in sedimentary rocks of mid-Proterozoic age. These primordial compounds had previously remained unnoticed because their structures represent early intermediates of the modern sterol biosynthetic pathway, as predicted by Konrad Bloch4. The protosteroids reveal an ecologically prominent 'protosterol biota' that was widespread and abundant in aquatic environments from at least 1,640 to around 800 million years ago and that probably comprised ancient protosterol-producing bacteria and deep-branching stem-group eukaryotes. Modern eukaryotes started to appear in the Tonian period (1,000 to 720 million years ago), fuelled by the proliferation of red algae (rhodophytes) by around 800 million years ago. This 'Tonian transformation' emerges as one of the most profound ecological turning points in the Earth's history.


Asunto(s)
Evolución Biológica , Eucariontes , Fósiles , Bacterias/química , Bacterias/metabolismo , Eucariontes/química , Eucariontes/clasificación , Eucariontes/metabolismo , Células Eucariotas/química , Células Eucariotas/clasificación , Células Eucariotas/metabolismo , Esteroles/análisis , Esteroles/biosíntesis , Esteroles/aislamiento & purificación , Esteroles/metabolismo , Sedimentos Geológicos/química , Vías Biosintéticas , Organismos Acuáticos/química , Organismos Acuáticos/clasificación , Organismos Acuáticos/metabolismo , Biota , Filogenia , Historia Antigua
9.
Nature ; 612(7941): 764-770, 2022 12.
Artículo en Inglés | MEDLINE | ID: mdl-36477536

RESUMEN

The ocean-atmosphere exchange of CO2 largely depends on the balance between marine microbial photosynthesis and respiration. Despite vast taxonomic and metabolic diversity among marine planktonic bacteria and archaea (prokaryoplankton)1-3, their respiration usually is measured in bulk and treated as a 'black box' in global biogeochemical models4; this limits the mechanistic understanding of the global carbon cycle. Here, using a technology for integrated phenotype analyses and genomic sequencing of individual microbial cells, we show that cell-specific respiration rates differ by more than 1,000× among prokaryoplankton genera. The majority of respiration was found to be performed by minority members of prokaryoplankton (including the Roseobacter cluster), whereas cells of the most prevalent lineages (including Pelagibacter and SAR86) had extremely low respiration rates. The decoupling of respiration rates from abundance among lineages, elevated counts of proteorhodopsin transcripts in Pelagibacter and SAR86 cells and elevated respiration of SAR86 at night indicate that proteorhodopsin-based phototrophy3,5-7 probably constitutes an important source of energy to prokaryoplankton and may increase growth efficiency. These findings suggest that the dependence of prokaryoplankton on respiration and remineralization of phytoplankton-derived organic carbon into CO2 for its energy demands and growth may be lower than commonly assumed and variable among lineages.


Asunto(s)
Organismos Acuáticos , Archaea , Bacterias , Ciclo del Carbono , Respiración de la Célula , Plancton , Alphaproteobacteria/genética , Alphaproteobacteria/crecimiento & desarrollo , Alphaproteobacteria/metabolismo , Bacterias/clasificación , Bacterias/genética , Bacterias/crecimiento & desarrollo , Bacterias/metabolismo , Dióxido de Carbono/metabolismo , Plancton/clasificación , Plancton/genética , Plancton/crecimiento & desarrollo , Plancton/metabolismo , Agua de Mar/microbiología , Organismos Acuáticos/clasificación , Organismos Acuáticos/genética , Organismos Acuáticos/crecimiento & desarrollo , Organismos Acuáticos/metabolismo , Archaea/genética , Archaea/crecimiento & desarrollo , Archaea/metabolismo , Respiración de la Célula/fisiología , Fotosíntesis
10.
Nature ; 600(7887): 105-109, 2021 12.
Artículo en Inglés | MEDLINE | ID: mdl-34732889

RESUMEN

Symbiotic N2-fixing microorganisms have a crucial role in the assimilation of nitrogen by eukaryotes in nitrogen-limited environments1-3. Particularly among land plants, N2-fixing symbionts occur in a variety of distantly related plant lineages and often involve an intimate association between host and symbiont2,4. Descriptions of such intimate symbioses are lacking for seagrasses, which evolved around 100 million years ago from terrestrial flowering plants that migrated back to the sea5. Here we describe an N2-fixing symbiont, 'Candidatus Celerinatantimonas neptuna', that lives inside seagrass root tissue, where it provides ammonia and amino acids to its host in exchange for sugars. As such, this symbiosis is reminiscent of terrestrial N2-fixing plant symbioses. The symbiosis between Ca. C. neptuna and its host Posidonia oceanica enables highly productive seagrass meadows to thrive in the nitrogen-limited Mediterranean Sea. Relatives of Ca. C. neptuna occur worldwide in coastal ecosystems, in which they may form similar symbioses with other seagrasses and saltmarsh plants. Just like N2-fixing microorganisms might have aided the colonization of nitrogen-poor soils by early land plants6, the ancestors of Ca. C. neptuna and its relatives probably enabled flowering plants to invade nitrogen-poor marine habitats, where they formed extremely efficient blue carbon ecosystems7.


Asunto(s)
Alismatales/microbiología , Organismos Acuáticos/metabolismo , Bacterias/metabolismo , Fijación del Nitrógeno , Nitrógeno/metabolismo , Simbiosis , Alismatales/metabolismo , Aminoácidos/metabolismo , Amoníaco/metabolismo , Organismos Acuáticos/microbiología , Ecosistema , Endófitos/metabolismo , Mar Mediterráneo , Hojas de la Planta/metabolismo , Raíces de Plantas/metabolismo , Raíces de Plantas/microbiología
11.
Nature ; 579(7798): 250-255, 2020 03.
Artículo en Inglés | MEDLINE | ID: mdl-32161389

RESUMEN

The lithified lower oceanic crust is one of Earth's last biological frontiers as it is difficult to access. It is challenging for microbiota that live in marine subsurface sediments or igneous basement to obtain sufficient carbon resources and energy to support growth1-3 or to meet basal power requirements4 during periods of resource scarcity. Here we show how limited and unpredictable sources of carbon and energy dictate survival strategies used by low-biomass microbial communities that live 10-750 m below the seafloor at Atlantis Bank, Indian Ocean, where Earth's lower crust is exposed at the seafloor. Assays of enzyme activities, lipid biomarkers, marker genes and microscopy indicate heterogeneously distributed and viable biomass with ultralow cell densities (fewer than 2,000 cells per cm3). Expression of genes involved in unexpected heterotrophic processes includes those with a role in the degradation of polyaromatic hydrocarbons, use of polyhydroxyalkanoates as carbon-storage molecules and recycling of amino acids to produce compounds that can participate in redox reactions and energy production. Our study provides insights into how microorganisms in the plutonic crust are able to survive within fractures or porous substrates by coupling sources of energy to organic and inorganic carbon resources that are probably delivered through the circulation of subseafloor fluids or seawater.


Asunto(s)
Organismos Acuáticos/genética , Organismos Acuáticos/metabolismo , Metabolismo Energético/genética , Sedimentos Geológicos/microbiología , Microbiota/genética , Océanos y Mares , Ciclo del Carbono/genética , Perfilación de la Expresión Génica
12.
Nature ; 585(7826): 557-562, 2020 09.
Artículo en Inglés | MEDLINE | ID: mdl-32939093

RESUMEN

Climate and physiology shape biogeography, yet the range limits of species can rarely be ascribed to the quantitative traits of organisms1-3. Here we evaluate whether the geographical range boundaries of species coincide with ecophysiological limits to acquisition of aerobic energy4 for a global cross-section of the biodiversity of marine animals. We observe a tight correlation between the metabolic rate and the efficacy of oxygen supply, and between the temperature sensitivities of these traits, which suggests that marine animals are under strong selection for the tolerance of low O2 (hypoxia)5. The breadth of the resulting physiological tolerances of marine animals predicts a variety of geographical niches-from the tropics to high latitudes and from shallow to deep water-which better align with species distributions than do models based on either temperature or oxygen alone. For all studied species, thermal and hypoxic limits are substantially reduced by the energetic demands of ecological activity, a trait that varies similarly among marine and terrestrial taxa. Active temperature-dependent hypoxia thus links the biogeography of diverse marine species to fundamental energetic requirements that are shared across the animal kingdom.


Asunto(s)
Organismos Acuáticos/clasificación , Organismos Acuáticos/metabolismo , Ecosistema , Filogeografía , Aerobiosis , Animales , Organismos Acuáticos/crecimiento & desarrollo , Metabolismo Basal , Aves/metabolismo , Peso Corporal , Hipoxia/metabolismo , Hipoxia/veterinaria , Mamíferos/metabolismo , Oxígeno/metabolismo , Reptiles/metabolismo , Especificidad de la Especie , Temperatura
13.
Nature ; 583(7814): 78-82, 2020 07.
Artículo en Inglés | MEDLINE | ID: mdl-32494011

RESUMEN

Many animals build complex structures to aid in their survival, but very few are built exclusively from materials that animals create 1,2. In the midwaters of the ocean, mucoid structures are readily secreted by numerous animals, and serve many vital functions3,4. However, little is known about these mucoid structures owing to the challenges of observing them in the deep sea. Among these mucoid forms, the 'houses' of larvaceans are marvels of nature5, and in the ocean twilight zone giant larvaceans secrete and build mucus filtering structures that can reach diameters of more than 1 m6. Here we describe in situ laser-imaging technology7 that reconstructs three-dimensional models of mucus forms. The models provide high-resolution views of giant larvacean houses and elucidate the role that house structure has in food capture and predator avoidance. Now that tools exist to study mucus structures found throughout the ocean, we can shed light on some of nature's most complex forms.


Asunto(s)
Organismos Acuáticos/metabolismo , Moco/metabolismo , Urocordados/anatomía & histología , Urocordados/metabolismo , Animales , Ciclo del Carbono , Conducta Alimentaria , Cadena Alimentaria , Imagenología Tridimensional/instrumentación , Rayos Láser , Conformación Molecular , Moco/química , Océanos y Mares , Conducta Predatoria , Agua de Mar
14.
Nature ; 568(7752): 327-335, 2019 04.
Artículo en Inglés | MEDLINE | ID: mdl-30996317

RESUMEN

The ocean's ability to sequester carbon away from the atmosphere exerts an important control on global climate. The biological pump drives carbon storage in the deep ocean and is thought to function via gravitational settling of organic particles from surface waters. However, the settling flux alone is often insufficient to balance mesopelagic carbon budgets or to meet the demands of subsurface biota. Here we review additional biological and physical mechanisms that inject suspended and sinking particles to depth. We propose that these 'particle injection pumps' probably sequester as much carbon as the gravitational pump, helping to close the carbon budget and motivating further investigation into their environmental control.


Asunto(s)
Dióxido de Carbono/análisis , Secuestro de Carbono , Gravitación , Agua de Mar/química , Organismos Acuáticos/metabolismo , Atmósfera/química , Biota , Carbono/análisis , Carbono/química , Dióxido de Carbono/química , Dióxido de Carbono/metabolismo , Océanos y Mares , Fotosíntesis , Solubilidad
15.
Nature ; 569(7757): 551-555, 2019 05.
Artículo en Inglés | MEDLINE | ID: mdl-31061499

RESUMEN

Marine phytoplankton have a crucial role in the modulation of marine-based food webs1, fishery yields2 and the global drawdown of atmospheric carbon dioxide3. However, owing to sparse measurements before satellite monitoring in the twenty-first century, the long-term response of planktonic stocks to climate forcing is unknown. Here, using a continuous, multi-century record of subarctic Atlantic marine productivity, we show that a marked 10 ± 7% decline in net primary productivity has occurred across this highly productive ocean basin over the past two centuries. We support this conclusion by the application of a marine-productivity proxy, established using the signal of the planktonic-derived aerosol methanesulfonic acid, which is commonly identified across an array of Greenlandic ice cores. Using contemporaneous satellite-era observations, we demonstrate the use of this signal as a robust and high-resolution proxy for past variations in spatially integrated marine productivity. We show that the initiation of declining subarctic Atlantic productivity broadly coincides with the onset of Arctic surface warming4, and that productivity strongly covaries with regional sea-surface temperatures and basin-wide gyre circulation strength over recent decades. Taken together, our results suggest that the decline in industrial-era productivity may be evidence of the predicted5 collapse of northern Atlantic planktonic stocks in response to a weakened Atlantic Meridional Overturning Circulation6-8. Continued weakening of this Atlantic Meridional Overturning Circulation, as projected for the twenty-first century9,10, may therefore result in further productivity declines across this globally relevant region.


Asunto(s)
Organismos Acuáticos/metabolismo , Cadena Alimentaria , Fitoplancton/metabolismo , Movimientos del Agua , Animales , Regiones Árticas , Océano Atlántico , Atmósfera/química , Explotaciones Pesqueras , Calentamiento Global , Groenlandia , Historia del Siglo XVIII , Historia del Siglo XIX , Historia del Siglo XX , Historia del Siglo XXI , Agua de Mar/análisis
16.
Nature ; 566(7743): 205-211, 2019 02.
Artículo en Inglés | MEDLINE | ID: mdl-30760914

RESUMEN

Uncertainty in the global patterns of marine nitrogen fixation limits our understanding of the response of the ocean's nitrogen and carbon cycles to environmental change. The geographical distribution of and ecological controls on nitrogen fixation are difficult to constrain with limited in situ measurements. Here we present convergent estimates of nitrogen fixation from an inverse biogeochemical and a prognostic ocean model. Our results demonstrate strong spatial variability in the nitrogen-to-phosphorus ratio of exported organic matter that greatly increases the global nitrogen-fixation rate (because phytoplankton manage with less phosphorus when it is in short supply). We find that the input of newly fixed nitrogen from microbial fixation and external inputs (atmospheric deposition and river fluxes) accounts for up to 50 per cent of carbon export in subtropical gyres. We also find that nitrogen fixation and denitrification are spatially decoupled but that nevertheless nitrogen sources and sinks appear to be balanced over the past few decades. Moreover, we propose a role for top-down zooplankton grazing control in shaping the global patterns of nitrogen fixation. Our findings suggest that biological carbon export in the ocean is higher than expected and that stabilizing nitrogen-cycle feedbacks are weaker than previously thought.


Asunto(s)
Organismos Acuáticos/metabolismo , Fijación del Nitrógeno , Nitrógeno/metabolismo , Fitoplancton/metabolismo , Zooplancton/metabolismo , Animales , Organismos Acuáticos/química , Atmósfera/química , Carbono/metabolismo , Secuestro de Carbono , Retroalimentación , Mapeo Geográfico , Nitrógeno/análisis , Océanos y Mares , Fósforo/análisis , Fósforo/metabolismo , Fitoplancton/química , Ríos/química , Zooplancton/química
17.
Nature ; 572(7771): 648-650, 2019 08.
Artículo en Inglés | MEDLINE | ID: mdl-31391584

RESUMEN

More than three billion people rely on seafood for nutrition. However, fish are the predominant source of human exposure to methylmercury (MeHg), a potent neurotoxic substance. In the United States, 82% of population-wide exposure to MeHg is from the consumption of marine seafood and almost 40% is from fresh and canned tuna alone1. Around 80% of the inorganic mercury (Hg) that is emitted to the atmosphere from natural and human sources is deposited in the ocean2, where some is converted by microorganisms to MeHg. In predatory fish, environmental MeHg concentrations are amplified by a million times or more. Human exposure to MeHg has been associated with long-term neurocognitive deficits in children that persist into adulthood, with global costs to society that exceed US$20 billion3. The first global treaty on reductions in anthropogenic Hg emissions (the Minamata Convention on Mercury) entered into force in 2017. However, effects of ongoing changes in marine ecosystems on bioaccumulation of MeHg in marine predators that are frequently consumed by humans (for example, tuna, cod and swordfish) have not been considered when setting global policy targets. Here we use more than 30 years of data and ecosystem modelling to show that MeHg concentrations in Atlantic cod (Gadus morhua) increased by up to 23% between the 1970s and 2000s as a result of dietary shifts initiated by overfishing. Our model also predicts an estimated 56% increase in tissue MeHg concentrations in Atlantic bluefin tuna (Thunnus thynnus) due to increases in seawater temperature between a low point in 1969 and recent peak levels-which is consistent with 2017 observations. This estimated increase in tissue MeHg exceeds the modelled 22% reduction that was achieved in the late 1990s and 2000s as a result of decreased seawater MeHg concentrations. The recently reported plateau in global anthropogenic Hg emissions4 suggests that ocean warming and fisheries management programmes will be major drivers of future MeHg concentrations in marine predators.


Asunto(s)
Organismos Acuáticos/metabolismo , Cambio Climático , Exposición a Riesgos Ambientales/análisis , Explotaciones Pesqueras/provisión & distribución , Peces/metabolismo , Cadena Alimentaria , Compuestos de Metilmercurio/análisis , Conducta Predatoria , Animales , Organismos Acuáticos/química , Organismos Acuáticos/clasificación , Dieta/veterinaria , Cazón/metabolismo , Peces/clasificación , Contaminación de Alimentos/análisis , Gadus morhua/metabolismo , Humanos , Alimentos Marinos/análisis , Agua de Mar/química , Contaminantes Químicos del Agua/análisis
18.
Nature ; 575(7783): 500-504, 2019 11.
Artículo en Inglés | MEDLINE | ID: mdl-31723261

RESUMEN

One of the most abundant sources of organic carbon in the ocean is glycolate, the secretion of which by marine phytoplankton results in an estimated annual flux of one petagram of glycolate in marine environments1. Although it is generally accepted that glycolate is oxidized to glyoxylate by marine bacteria2-4, the further fate of this C2 metabolite is not well understood. Here we show that ubiquitous marine Proteobacteria are able to assimilate glyoxylate via the ß-hydroxyaspartate cycle (BHAC) that was originally proposed 56 years ago5. We elucidate the biochemistry of the BHAC and describe the structure of its key enzymes, including a previously unknown primary imine reductase. Overall, the BHAC enables the direct production of oxaloacetate from glyoxylate through only four enzymatic steps, representing-to our knowledge-the most efficient glyoxylate assimilation route described to date. Analysis of marine metagenomes shows that the BHAC is globally distributed and on average 20-fold more abundant than the glycerate pathway, the only other known pathway for net glyoxylate assimilation. In a field study of a phytoplankton bloom, we show that glycolate is present in high nanomolar concentrations and taken up by prokaryotes at rates that allow a full turnover of the glycolate pool within one week. During the bloom, genes that encode BHAC key enzymes are present in up to 1.5% of the bacterial community and actively transcribed, supporting the role of the BHAC in glycolate assimilation and suggesting a previously undescribed trophic interaction between autotrophic phytoplankton and heterotrophic bacterioplankton.


Asunto(s)
Organismos Acuáticos/metabolismo , Ácido Aspártico/análogos & derivados , Glicolatos/metabolismo , Redes y Vías Metabólicas , Proteobacteria/metabolismo , Oxidorreductasas de Alcohol/metabolismo , Aldehído-Liasas/metabolismo , Organismos Acuáticos/enzimología , Ácido Aspártico/metabolismo , Biocatálisis , Glioxilatos/metabolismo , Hidroliasas/metabolismo , Cinética , Oxidorreductasas/metabolismo , Fitoplancton/enzimología , Fitoplancton/metabolismo , Proteobacteria/enzimología , Transaminasas/metabolismo
19.
Nature ; 568(7750): 108-111, 2019 04.
Artículo en Inglés | MEDLINE | ID: mdl-30918404

RESUMEN

Ethane is the second most abundant component of natural gas in addition to methane, and-similar to methane-is chemically unreactive. The biological consumption of ethane under anoxic conditions was suggested by geochemical profiles at marine hydrocarbon seeps1-3, and through ethane-dependent sulfate reduction in slurries4-7. Nevertheless, the microorganisms and reactions that catalyse this process have to date remained unknown8. Here we describe ethane-oxidizing archaea that were obtained by specific enrichment over ten years, and analyse these archaea using phylogeny-based fluorescence analyses, proteogenomics and metabolite studies. The co-culture, which oxidized ethane completely while reducing sulfate to sulfide, was dominated by an archaeon that we name 'Candidatus Argoarchaeum ethanivorans'; other members were sulfate-reducing Deltaproteobacteria. The genome of Ca. Argoarchaeum contains all of the genes that are necessary for a functional methyl-coenzyme M reductase, and all subunits were detected in protein extracts. Accordingly, ethyl-coenzyme M (ethyl-CoM) was identified as an intermediate by liquid chromatography-tandem mass spectrometry. This indicated that Ca. Argoarchaeum initiates ethane oxidation by ethyl-CoM formation, analogous to the recently described butane activation by 'Candidatus Syntrophoarchaeum'9. Proteogenomics further suggests that oxidation of intermediary acetyl-CoA to CO2 occurs through the oxidative Wood-Ljungdahl pathway. The identification of an archaeon that uses ethane (C2H6) fills a gap in our knowledge of microorganisms that specifically oxidize members of the homologous alkane series (CnH2n+2) without oxygen. Detection of phylogenetic and functional gene markers related to those of Ca. Argoarchaeum at deep-sea gas seeps10-12 suggests that archaea that are able to oxidize ethane through ethyl-CoM are widespread members of the local communities fostered by venting gaseous alkanes around these seeps.


Asunto(s)
Organismos Acuáticos/metabolismo , Archaea/metabolismo , Etano/metabolismo , Anaerobiosis , Archaea/clasificación , Archaea/enzimología , Archaea/genética , Deltaproteobacteria/metabolismo , Etano/química , Gases/química , Gases/metabolismo , Golfo de México , Metano/biosíntesis , Oxidación-Reducción , Oxidorreductasas/genética , Oxidorreductasas/aislamiento & purificación , Oxidorreductasas/metabolismo , Filogenia , ARN Ribosómico 16S/genética , Sulfatos/metabolismo , Sulfuros/metabolismo
20.
Proc Natl Acad Sci U S A ; 119(11): e2113386119, 2022 03 15.
Artículo en Inglés | MEDLINE | ID: mdl-35254902

RESUMEN

SignificancePhosphonates are a class of phosphorus metabolites characterized by a highly stable C-P bond. Phosphonates accumulate to high concentrations in seawater, fuel a large fraction of marine methane production, and serve as a source of phosphorus to microbes inhabiting nutrient-limited regions of the oligotrophic ocean. Here, we show that 15% of all bacterioplankton in the surface ocean have genes phosphonate synthesis and that most belong to the abundant groups Prochlorococcus and SAR11. Genomic and chemical evidence suggests that phosphonates are incorporated into cell-surface phosphonoglycoproteins that may act to mitigate cell mortality by grazing and viral lysis. These results underscore the large global biogeochemical impact of relatively rare but highly expressed traits in numerically abundant groups of marine bacteria.


Asunto(s)
Organismos Acuáticos/metabolismo , Organofosfonatos/metabolismo , Organismos Acuáticos/genética , Bacterias/genética , Bacterias/metabolismo , Regulación Bacteriana de la Expresión Génica , Transferencia de Gen Horizontal , Genes Bacterianos , Modelos Biológicos , Prochlorococcus/genética , Prochlorococcus/metabolismo , Carácter Cuantitativo Heredable , Agua de Mar/microbiología
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