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1.
J Biol Chem ; 298(12): 102652, 2022 12.
Artículo en Inglés | MEDLINE | ID: mdl-36444882

RESUMEN

The serpin plasminogen activator inhibitor 1 (PAI-1) spontaneously undergoes a massive structural change from a metastable and active conformation, with a solvent-accessible reactive center loop (RCL), to a stable, inactive, or latent conformation, with the RCL inserted into the central ß-sheet. Physiologically, conversion to the latent state is regulated by the binding of vitronectin, which hinders the latency transition rate approximately twofold. The molecular mechanisms leading to this rate change are unclear. Here, we investigated the effects of vitronectin on the PAI-1 latency transition using all-atom path sampling simulations in explicit solvent. In simulated latency transitions of free PAI-1, the RCL is quite mobile as is the gate, the region that impedes RCL access to the central ß-sheet. This mobility allows the formation of a transient salt bridge that facilitates the transition; this finding rationalizes existing mutagenesis results. Vitronectin binding reduces RCL and gate mobility by allosterically rigidifying structural elements over 40 Å away from the binding site, thus blocking transition to the latent conformation. The effects of vitronectin are propagated by a network of dynamically correlated residues including a number of conserved sites that were previously identified as important for PAI-1 stability. Simulations also revealed a transient pocket populated only in the vitronectin-bound state, corresponding to a cryptic drug-binding site identified by crystallography. Overall, these results shed new light on PAI-1 latency transition regulation by vitronectin and illustrate the potential of path sampling simulations for understanding functional protein conformational changes and for facilitating drug discovery.


Asunto(s)
Inhibidor 1 de Activador Plasminogénico , Vitronectina , Inhibidor 1 de Activador Plasminogénico/metabolismo , Vitronectina/química , Modelos Moleculares , Conformación Proteica , Solventes
2.
Proc Natl Acad Sci U S A ; 117(31): 18504-18510, 2020 08 04.
Artículo en Inglés | MEDLINE | ID: mdl-32699145

RESUMEN

The human blood protein vitronectin (Vn) is a major component of the abnormal deposits associated with age-related macular degeneration, Alzheimer's disease, and many other age-related disorders. Its accumulation with lipids and hydroxyapatite (HAP) has been demonstrated, but the precise mechanism for deposit formation remains unknown. Using a combination of solution and solid-state NMR experiments, cosedimentation assays, differential scanning fluorimetry (DSF), and binding energy calculations, we demonstrate that Vn is capable of binding both soluble ionic calcium and crystalline HAP, with high affinity and chemical specificity. Calcium ions bind preferentially at an external site, at the top of the hemopexin-like (HX) domain, with a group of four Asp carboxylate groups. The same external site is also implicated in HAP binding. Moreover, Vn acquires thermal stability upon association with either calcium ions or crystalline HAP. The data point to a mechanism whereby Vn plays an active role in orchestrating calcified deposit formation. They provide a platform for understanding the pathogenesis of macular degeneration and other related degenerative disorders, and the normal functions of Vn, especially those related to bone resorption.


Asunto(s)
Calcio/metabolismo , Durapatita/metabolismo , Degeneración Macular/metabolismo , Vitronectina/metabolismo , Sitios de Unión , Calcio/química , Durapatita/química , Humanos , Unión Proteica , Vitronectina/química
3.
Biophys J ; 121(20): 3896-3906, 2022 10 18.
Artículo en Inglés | MEDLINE | ID: mdl-36056555

RESUMEN

The adaptability of proteins to their work environments is fundamental for cellular life. Here, we describe how the hemopexin-like domain of the multifunctional blood glycoprotein vitronectin binds Ca2+ to adapt to excursions of temperature and shear stress. Using X-ray crystallography, molecular dynamics simulations, NMR, and differential scanning fluorimetry, we describe how Ca2+ and its flexible hydration shell enable the protein to perform conformational changes that relay beyond the calcium-binding site and alter the number of polar contacts to enhance conformational stability. By means of mutagenesis, we identify key residues that cooperate with Ca2+ to promote protein stability, and we show that calcium association confers protection against shear stress, a property that is advantageous for proteins that circulate in the vasculature, like vitronectin.


Asunto(s)
Calcio , Vitronectina , Calcio/metabolismo , Vitronectina/química , Vitronectina/metabolismo , Unión Proteica , Hemopexina/metabolismo , Sitios de Unión , Cristalografía por Rayos X , Conformación Proteica
4.
J Biol Chem ; 295(29): 10008-10022, 2020 07 17.
Artículo en Inglés | MEDLINE | ID: mdl-32499371

RESUMEN

Staphylococcus aureus is an important bacterial pathogen that can cause a wide spectrum of diseases in humans and other animals. S. aureus expresses a variety of virulence factors that promote infection with this pathogen. These include cell-surface proteins that mediate adherence of the bacterial cells to host extracellular matrix components, such as fibronectin and fibrinogen. Here, using immunoblotting, ELISA, and surface plasmon resonance analysis, we report that the iron-regulated surface determinant B (IsdB) protein, besides being involved in heme transport, plays a novel role as a receptor for the plasma and extracellular matrix protein vitronectin (Vn). Vn-binding activity was expressed by staphylococcal strains grown under iron starvation conditions when Isd proteins are expressed. Recombinant IsdB bound Vn dose dependently and specifically. Both near-iron transporter motifs NEAT1 and NEAT2 of IsdB individually bound Vn in a saturable manner, with KD values in the range of 16-18 nm Binding of Vn to IsdB was specifically blocked by heparin and reduced at high ionic strength. Furthermore, IsdB-expressing bacterial cells bound significantly higher amounts of Vn from human plasma than did an isdB mutant. Adherence to and invasion of epithelial and endothelial cells by IsdB-expressing S. aureus cells was promoted by Vn, and an αvß3 integrin-blocking mAb or cilengitide inhibited adherence and invasion by staphylococci, suggesting that Vn acts as a bridge between IsdB and host αvß3 integrin.


Asunto(s)
Proteínas de Transporte de Catión/química , Staphylococcus aureus/química , Vitronectina/química , Proteínas de Transporte de Catión/metabolismo , Humanos , Integrina alfaVbeta3/química , Integrina alfaVbeta3/metabolismo , Unión Proteica , Staphylococcus aureus/metabolismo , Vitronectina/metabolismo
5.
Int J Mol Sci ; 21(21)2020 Oct 22.
Artículo en Inglés | MEDLINE | ID: mdl-33105833

RESUMEN

Significant amounts of enolase-a cytosolic enzyme involved in the glycolysis pathway-are exposed on the cell surface of Candida yeast. It has been hypothesized that this exposed enolase form contributes to infection-related phenomena such as fungal adhesion to human tissues, and the activation of fibrinolysis and extracellular matrix degradation. The aim of the present study was to characterize, in structural terms, the protein-protein interactions underlying these moonlighting functions of enolase. The tight binding of human vitronectin, fibronectin and plasminogen by purified C. albicans and C. tropicalis enolases was quantitatively analyzed by surface plasmon resonance measurements, and the dissociation constants of the formed complexes were determined to be in the 10-7-10-8 M range. In contrast, the binding of human proteins by the S.cerevisiae enzyme was much weaker. The chemical cross-linking method was used to map the sites on enolase molecules that come into direct contact with human proteins. An internal motif 235DKAGYKGKVGIAMDVASSEFYKDGK259 in C. albicans enolase was suggested to contribute to the binding of all three human proteins tested. Models for these interactions were developed and revealed the sites on the enolase molecule that bind human proteins, extensively overlap for these ligands, and are well-separated from the catalytic activity center.


Asunto(s)
Fibronectinas/metabolismo , Fosfopiruvato Hidratasa/metabolismo , Plasminógeno/metabolismo , Vitronectina/metabolismo , Secuencias de Aminoácidos , Anticuerpos/metabolismo , Unión Competitiva , Candida albicans/enzimología , Candida tropicalis/enzimología , Citosol/enzimología , Fibronectinas/química , Interacciones Huésped-Patógeno/fisiología , Humanos , Proteínas Inmovilizadas/metabolismo , Modelos Moleculares , Fosfopiruvato Hidratasa/química , Fosfopiruvato Hidratasa/genética , Fosfopiruvato Hidratasa/inmunología , Plasminógeno/química , Vitronectina/química
6.
Molecules ; 25(22)2020 Nov 10.
Artículo en Inglés | MEDLINE | ID: mdl-33182593

RESUMEN

Multivalent interactions frequently occur in biological systems and typically provide higher binding affinity and selectivity in target recognition than when only monovalent interactions are operative. Thus, taking inspiration by nature, bivalent or multivalent nucleic acid aptamers recognizing a specific biological target have been extensively studied in the last decades. Indeed, oligonucleotide-based aptamers are suitable building blocks for the development of highly efficient multivalent systems since they can be easily modified and assembled exploiting proper connecting linkers of different nature. Thus, substantial research efforts have been put in the construction of dimeric/multimeric versions of effective aptamers with various degrees of success in target binding affinity or therapeutic activity enhancement. The present review summarizes recent advances in the design and development of dimeric and multimeric DNA-based aptamers, including those forming G-quadruplex (G4) structures, recognizing different key proteins in relevant pathological processes. Most of the designed constructs have shown improved performance in terms of binding affinity or therapeutic activity as anti-inflammatory, antiviral, anticoagulant, and anticancer agents and their number is certainly bound to grow in the next future.


Asunto(s)
Aptámeros de Nucleótidos/química , G-Cuádruplex , Fosfoproteínas/química , Proteínas de Unión al ARN/química , Antiinflamatorios/química , Anticoagulantes/química , Antineoplásicos/química , Antivirales/química , Complejo CD3/química , Moléculas de Adhesión Celular/química , ADN/química , Dimerización , Humanos , Inmunoglobulina M/química , Estructura Secundaria de Proteína , Proteínas Proto-Oncogénicas c-met/química , Pirrolidinas/química , Proteínas Tirosina Quinasas Receptoras/química , Receptores de Antígenos de Linfocitos T/química , Factor A de Crecimiento Endotelial Vascular/metabolismo , Vitronectina/química , Nucleolina
7.
Biochemistry ; 58(51): 5117-5134, 2019 12 24.
Artículo en Inglés | MEDLINE | ID: mdl-31793295

RESUMEN

Small-angle neutron scattering (SANS) measurements were pursued to study human vitronectin, a protein found in tissues and the circulation that regulates cell adhesion/migration and proteolytic cascades that govern hemostasis and pericellular proteolysis. Many of these functions occur via interactions with its binding partner, plasminogen activator inhibitor-1 (PAI-1), the chief inhibitor of proteases that lyse and activate plasminogen. We focused on a region of vitronectin that remains uncharacterized from previous X-ray scattering, nuclear magnetic resonance, and computational modeling approaches and which we propose is involved in binding to PAI-1. This region, which bridges the N-terminal somatomedin B (SMB) domain with a large central ß-propeller domain of vitronectin, appears unstructured and has characteristics of an intrinsically disordered domain (IDD). The effect of osmolytes was evaluated using circular dichroism and SANS to explore the potential of the IDD to undergo a disorder-to-order transition. The results suggest that the IDD favors a more ordered structure under osmotic pressure; SANS shows a smaller radius of gyration (Rg) and a more compact fold of the IDD upon addition of osmolytes. To test whether PAI-1 binding is also coupled to folding within the IDD structure, a set of SANS experiments with contrast variation were performed on the complex of PAI-1 with a vitronectin fragment corresponding to the N-terminal 130 amino acids (denoted the SMB-IDD because it contains the SMB domain and IDD in linear sequence). Analysis of the SANS data using the Ensemble Optimization Method confirms that the SMB-IDD adopts a more compact configuration when bound to PAI-1. Calculated structures for the PAI-1:SMB-IDD complex suggest that the IDD provides an interaction surface outside of the primary PAI-1-binding site located within the SMB domain; this binding is proposed to lead to the assembly of higher-order structures of vitronectin and PAI-1 commonly found in tissues.


Asunto(s)
Proteínas Intrínsecamente Desordenadas/química , Proteínas Intrínsecamente Desordenadas/metabolismo , Inhibidor 1 de Activador Plasminogénico/metabolismo , Vitronectina/química , Vitronectina/metabolismo , Modelos Moleculares , Unión Proteica , Dominios Proteicos
8.
BMC Evol Biol ; 19(1): 27, 2019 01 17.
Artículo en Inglés | MEDLINE | ID: mdl-30654737

RESUMEN

BACKGROUND: The plasminogen (PLG) activation system is composed by a series of serine proteases, inhibitors and several binding proteins, which together control the temporal and spatial generation of the active serine protease plasmin. As this proteolytic system plays a central role in human physiology and pathophysiology it has been extensively studied in mammals. The serine proteases of this system are believed to originate from an ancestral gene by gene duplications followed by domain gains and deletions. However, the identification of ancestral forms in primitive chordates supporting these theories remains elusive. In addition, evolutionary studies of the non-proteolytic members of this system are scarce. RESULTS: Our phylogenetic analyses place lamprey PLG at the root of the vertebrate PLG-group, while lamprey PLG-related growth factors represent the ancestral forms of the jawed-vertebrate orthologues. Furthermore, we find that the earliest putative orthologue of the PLG activator group is the hyaluronan binding protein 2 (HABP2) gene found in lampreys. The prime plasminogen activators (tissue- and urokinase-type plasminogen activator, tPA and uPA) first occur in cartilaginous fish and phylogenetic analyses confirm that all orthologues identified compose monophyletic groups to their mammalian counterparts. Cartilaginous fishes exhibit the most ancient vitronectin of all vertebrates, while plasminogen activator inhibitor 1 (PAI-1) appears for the first time in cartilaginous fishes and is conserved in the rest of jawed vertebrate clades. PAI-2 appears for the first time in the common ancestor of reptiles and mammals, and represents the latest appearing plasminogen activator inhibitor. Finally, we noted that the urokinase-type plasminogen activator receptor (uPAR)-and three-LU domain containing genes in general-occurred later in evolution and was first detectable after coelacanths. CONCLUSIONS: This study identifies several primitive orthologues of the mammalian plasminogen activation system. These ancestral forms provide clues to the origin and diversification of this enzyme system. Further, the discovery of several members-hitherto unknown in mammals-provide new perspectives on the evolution of this important enzyme system.


Asunto(s)
Cordados/genética , Variación Genética , Filogenia , Plasminógeno/genética , Secuencia de Aminoácidos , Animales , Bases de Datos de Proteínas , Humanos , Funciones de Verosimilitud , Inhibidor 1 de Activador Plasminogénico/química , Dominios Proteicos , Análisis de Secuencia de ARN , Transcriptoma/genética , Activador de Plasminógeno de Tipo Uroquinasa/química , Vitronectina/química
9.
Chemistry ; 25(7): 1696-1700, 2019 Feb 01.
Artículo en Inglés | MEDLINE | ID: mdl-30452790

RESUMEN

This work takes advantage of one of the hallmarks of cancer, that is, the presence of tumor infiltrating cells of the immune system and leukocyte-secreted enzymes, to promote the activation of an anticancer drug at the tumor site. The peptidomimetic integrin ligand cyclo(DKP-RGD) was found to accumulate on the surface of αv ß3 integrin-expressing human renal cell carcinoma 786-O cells. The ligand was conjugated to the anticancer drug paclitaxel through a Asn-Pro-Val (NPV) tripeptide linker, which is a substrate of neutrophil-secreted elastase. In vitro linker cleavage assays and cell antiproliferative experiments demonstrate the efficacy of this tumor-targeting conjugate, opening the way to potential therapeutic applications.


Asunto(s)
Antineoplásicos Fitogénicos/metabolismo , Integrina alfaVbeta3/metabolismo , Elastasa de Leucocito/metabolismo , Paclitaxel/metabolismo , Antineoplásicos Fitogénicos/química , Antineoplásicos Fitogénicos/farmacología , Línea Celular Tumoral , Proliferación Celular/efectos de los fármacos , Liberación de Fármacos , Humanos , Integrina alfaVbeta3/genética , Ligandos , Microscopía Confocal , Oligopéptidos/química , Paclitaxel/química , Paclitaxel/farmacología , Vitronectina/química , Vitronectina/metabolismo
10.
Org Biomol Chem ; 17(19): 4705-4710, 2019 05 15.
Artículo en Inglés | MEDLINE | ID: mdl-31020985

RESUMEN

A non-internalizing αvß3 integrin ligand was conjugated to the anticancer drug MMAE through a ß-glucuronidase-responsive linker. In the presence of ß-glucuronidase, only the conjugate bearing a PEG4 spacer inhibited the proliferation of integrin-expressing cancer cells at low nanomolar concentrations, indicating important structural requirements for the efficacy of these therapeutics.


Asunto(s)
Antineoplásicos/farmacología , Glioblastoma/tratamiento farmacológico , Integrina alfaVbeta3/antagonistas & inhibidores , Oligopéptidos/farmacología , Antineoplásicos/síntesis química , Antineoplásicos/química , Línea Celular Tumoral , Proliferación Celular/efectos de los fármacos , Relación Dosis-Respuesta a Droga , Ensayos de Selección de Medicamentos Antitumorales , Glioblastoma/metabolismo , Glioblastoma/patología , Glucuronidasa , Humanos , Integrina alfaVbeta3/química , Integrina alfaVbeta3/metabolismo , Ligandos , Conformación Molecular , Oligopéptidos/síntesis química , Oligopéptidos/química , Relación Estructura-Actividad , Vitronectina/antagonistas & inhibidores , Vitronectina/química , Vitronectina/metabolismo
11.
J Mol Recognit ; 31(5): e2690, 2018 05.
Artículo en Inglés | MEDLINE | ID: mdl-29205553

RESUMEN

Changes in glycosylation have been associated with human cancer, but their complexity poses an analytical challenge. Ovarian cancer is a major cause of death in women because of an often late diagnosis. At least one-third of patients presents ascites fluid at diagnosis, and almost all have ascites at recurrence. Vitronectin (Vn) is a multifunctional glycoprotein that is suggested to be implicated in ovarian cancer metastasis and is found within ascites. The present study evaluated the potential of using lectin affinity for characterizing the glycosylation pattern of Vn. Human Vn was purified from 1 sample of ovarian cancer ascites or a pool of plasma samples. Consistent findings were observed with both dot blot and lectin array assays. Based on a panel of 40 lectins, the lectin array revealed discriminant patterns of lectin binding to Vn glycans. Interestingly, almost all the highlighted interactions were found to be higher with Vn from ascites relative to the plasma counterpart. Also, the lectin array was able to discriminate profiles of lectin interactions (ConA, SNA-I, PHA-E, PHA-L) between Vn samples that were not evident using dot blot, indicating its high sensitivity. The model of ConA binding during thermal unfolding of Vn confirmed the higher accessibility of mannosylated glycans in Vn from ascites as monitored by turbidimetry. Thus, this study demonstrated the usefulness of lectins and the lectin array as a glycoproteomic tool for high throughput and sensitive analysis of glycosylation patterns. Our data provide novel insights concerning Vn glycosylation patterns in clinical specimens, paving the way for further investigations regarding their functional impact and clinical interest.


Asunto(s)
Ascitis/diagnóstico , Lectinas/metabolismo , Neoplasias Ováricas/metabolismo , Vitronectina/sangre , Ascitis/sangre , Ascitis/metabolismo , Femenino , Glicosilación , Humanos , Neoplasias Ováricas/sangre , Proteómica , Sensibilidad y Especificidad , Vitronectina/química
12.
EMBO Rep ; 17(7): 982-98, 2016 07.
Artículo en Inglés | MEDLINE | ID: mdl-27189837

RESUMEN

Components of the plasminogen activation system including urokinase (uPA), its inhibitor (PAI-1) and its cell surface receptor (uPAR) have been implicated in a wide variety of biological processes related to tissue homoeostasis. Firstly, the binding of uPA to uPAR favours extracellular proteolysis by enhancing cell surface plasminogen activation. Secondly, it promotes cell adhesion and signalling through binding of the provisional matrix protein vitronectin. We now report that uPA and plasmin induces a potent negative feedback on cell adhesion through specific cleavage of the RGD motif in vitronectin. Cleavage of vitronectin by uPA displays a remarkable receptor dependence and requires concomitant binding of both uPA and vitronectin to uPAR Moreover, we show that PAI-1 counteracts the negative feedback and behaves as a proteolysis-triggered stabilizer of uPAR-mediated cell adhesion to vitronectin. These findings identify a novel and highly specific function for the plasminogen activation system in the regulation of cell adhesion to vitronectin. The cleavage of vitronectin by uPA and plasmin results in the release of N-terminal vitronectin fragments that can be detected in vivo, underscoring the potential physiological relevance of the process.


Asunto(s)
Secuencias de Aminoácidos , Adhesión Celular , Plasminógeno/metabolismo , Dominios y Motivos de Interacción de Proteínas , Activador de Plasminógeno de Tipo Uroquinasa/metabolismo , Vitronectina/química , Vitronectina/metabolismo , Línea Celular Tumoral , Retroalimentación Fisiológica , Fibrinolisina/metabolismo , Fibronectinas/metabolismo , Expresión Génica , Humanos , Inhibidor 1 de Activador Plasminogénico/metabolismo , Unión Proteica , Proteolisis , Activador de Plasminógeno de Tipo Uroquinasa/genética
13.
J Cell Mol Med ; 21(12): 3612-3625, 2017 Dec.
Artículo en Inglés | MEDLINE | ID: mdl-28941013

RESUMEN

The fundamental mechanisms underlying erosive oesophagitis and subsequent development of Barrett's oesophagus (BO) are poorly understood. Here, we investigated the contribution of specific components of the gastric refluxate on adhesion molecules involved in epithelial barrier maintenance. Cell line models of squamous epithelium (HET-1A) and BO (QH) were used to examine the effects of bile acids on cell adhesion to extracellular matrix proteins (Collagen, laminin, vitronectin, fibronectin) and expression of integrin ligands (α3 , α4, α5 , α6 and αν ). Experimental findings were validated in human explant oesophageal biopsies, a rat model of gastroesophageal reflux disease (GORD) and in patient tissue microarrays. The bile acid deoxycholic acid (DCA) specifically reduced adhesion of HET-1A cells to vitronectin and reduced cell-surface expression of integrin-αν via effects on endocytic recycling processes. Increased expression of integrin-αv was observed in ulcerated tissue in a rat model of GORD and in oesophagitis and Barrett's intestinal metaplasia patient tissue compared to normal squamous epithelium. Increased expression of integrin-αν was observed in QH BO cells compared to HET-1A cells. QH cells were resistant to DCA-mediated loss of adhesion and reduction in cell-surface expression of integrin-αν . We demonstrated that a specific component of the gastric refluxate, DCA, affects the epithelial barrier through modulation of integrin αν expression, providing a novel mechanism for bile acid-mediated erosion of oesophageal squamous epithelium and promotion of BO. Strategies aimed at preventing bile acid-mediated erosion should be considered in the clinical management of patients with GORD.


Asunto(s)
Esófago de Barrett/metabolismo , Ácido Desoxicólico/farmacología , Células Epiteliales/efectos de los fármacos , Esofagitis/metabolismo , Reflujo Gastroesofágico/metabolismo , Integrina alfaV/genética , Animales , Esófago de Barrett/genética , Esófago de Barrett/patología , Adhesión Celular , Línea Celular , Colágeno/química , Modelos Animales de Enfermedad , Células Epiteliales/metabolismo , Células Epiteliales/patología , Esofagitis/genética , Esofagitis/patología , Fibronectinas/química , Reflujo Gastroesofágico/genética , Reflujo Gastroesofágico/patología , Perfilación de la Expresión Génica , Regulación de la Expresión Génica , Humanos , Integrina alfaV/metabolismo , Integrinas/genética , Integrinas/metabolismo , Laminina/química , Permeabilidad/efectos de los fármacos , Transporte de Proteínas , Ratas , Análisis de Matrices Tisulares , Vitronectina/química
14.
J Cell Biochem ; 118(8): 2044-2052, 2017 08.
Artículo en Inglés | MEDLINE | ID: mdl-27808427

RESUMEN

It has been proposed that integrins adopt a low affinity conformation under physiological conditions. Integrin can either be activated through cytoplasm or by binding of cations such as Mn2+ to the head domain. The cytoplasmic activation pathway, that is, inside-out signaling has been regarded as the physiological pathway for integrin activation. Integrin ß8 is important for neuron vascular development. However, due to the highly divergent cytoplasmic domain, this integrin probably does not rely on inside-out signaling for affinity regulation. We therefore hypothesized that the ß8 integrin uniquely assumes a constitutively high affinity state under physiological conditions. We discovered that ß8 indeed exhibited high binding to soluble vitronectin in the presence of Ca2+ and the ligand binding could not be further enhanced by addition of Mn2+ . The lower ectodomain stalk of the integrin, which is comprised by the integrin epidermal growth factor-like (I-EGF) domains and ßTD domain, is critical for this high affinity conformation. In addition, we found that unlike other integrins, Mg2+ at low concentration inhibited ß8 ligand binding. Mutagenesis studies indicated that ß8 integrin possesses a unique cation binding site which might contribute to the ligand binding affinity. Our study showed that both the ß8 lower ectodomain stalk and the head domain play an important role in its high affinity state under physiological conditions. J. Cell. Biochem. 118: 2044-2052, 2017. © 2016 Wiley Periodicals, Inc.


Asunto(s)
Calcio/química , Integrina alfa5/química , Cadenas beta de Integrinas/química , Proteínas Recombinantes de Fusión/química , Vitronectina/química , Secuencia de Aminoácidos , Sitios de Unión , Calcio/metabolismo , Cationes Bivalentes , Expresión Génica , Células HEK293 , Humanos , Integrina alfa5/genética , Integrina alfa5/metabolismo , Cadenas beta de Integrinas/genética , Cadenas beta de Integrinas/metabolismo , Ligandos , Magnesio/química , Magnesio/metabolismo , Manganeso/química , Manganeso/metabolismo , Mutación , Unión Proteica , Dominios Proteicos , Proteínas Recombinantes de Fusión/genética , Proteínas Recombinantes de Fusión/metabolismo , Alineación de Secuencia , Homología de Secuencia de Aminoácido , Solubilidad , Soluciones , Vitronectina/genética , Vitronectina/metabolismo
15.
Chemistry ; 23(58): 14410-14415, 2017 Oct 17.
Artículo en Inglés | MEDLINE | ID: mdl-28816404

RESUMEN

This work reports the synthesis of three multimeric RGD peptidomimetic-paclitaxel conjugates featuring a number of αV ß3 integrin ligands ranging from 2 to 4. These constructs were assembled by conjugation of the integrin αV ß3 ligand cyclo[DKP-RGD]-CH2 NH2 with paclitaxel via a 2'-carbamate with a self-immolative spacer, the lysosomally cleavable Val-Ala dipeptide linker, a multimeric scaffold, a triazole linkage, and finally a PEG spacer. Two monomeric conjugates were also synthesized as reference compounds. Remarkably, the new multimeric conjugates showed a binding affinity for the purified integrin αV ß3 receptor that increased with the number of integrin ligands (reaching a minimum IC50 value of 1.2 nm for the trimeric), thus demonstrating that multivalency is an effective strategy to strengthen the ligand-target interactions.


Asunto(s)
Integrina alfaVbeta3/metabolismo , Oligopéptidos/química , Paclitaxel/química , Peptidomiméticos/química , Biotinilación , Concentración 50 Inhibidora , Integrina alfaVbeta3/química , Peptidomiméticos/metabolismo , Unión Proteica , Vitronectina/química , Vitronectina/metabolismo
16.
Fish Shellfish Immunol ; 65: 9-16, 2017 Jun.
Artículo en Inglés | MEDLINE | ID: mdl-28377270

RESUMEN

Vitronectin (Vtn) is a multifunctional protein that plays significant roles in cell adhesion, migration, spreading and survival, and in the regulation of membrane attack complex formation and the terminal pathway of complement activation in innate immune response. However, the expression and immune significance of Vtn in fish remains largely unknown. In order to understand the involvement of Vtn in fish innate immune response, here we cloned and characterized a full-length Vtn ortholog cDNA, termed PoVtn, from Japanese flounder Paralichthys olivaceus. The deduced PoVtn protein is comprised of 438 amino acids with a 19-amino-acid signal peptide sequence (1Met-19Ala) at the N-terminus. Protein domain analysis revealed that PoVtn possesses a conserved N-terminal somatomedin B domain followed by a conserved RGD motif and four haemopexin-like domains. Sequence analysis revealed that PoVtn has two potential glycosylation sites and shares 44-74% sequence identity with other teleost Vtn proteins. PoVtn mRNA was ubiquitously distributed in all examined normal tissues and showed the highest expression in Japanese flounder hepatopancreas tissue. PoVtn expression was induced by LPS and poly(I:C) challenges in the Japanese flounder head kidney macrophages (HKMs) and peripheral blood leucocytes (PBLs) and shows a pathogen-associated molecular pattern- and cell type-dependent manner. The expression of PoVtn was also modulated by bacterial challenge with Edwardsiella tarda in Japanese flounder immune-related tissues including head kidney, gill and spleen. Furthermore, overexpression of PoVtn in Japanese flounder FG-9307 cells significantly attenuated the LPS- and poly(I:C)-induced proinflammatory cytokines IL-1beta and TNF-alpha gene expression. Taken our findings together, we for the first time characterized Vtn gene expression in response to inflammatory stimuli in fish. Our results suggested a potential role of PoVtn in regulating fish innate immunity.


Asunto(s)
Proteínas de Peces/genética , Peces Planos/genética , Peces Planos/inmunología , Regulación de la Expresión Génica , Inmunidad Innata/genética , Vitronectina/genética , Secuencia de Aminoácidos , Animales , Clonación Molecular , Citocinas/genética , Citocinas/metabolismo , ADN Complementario/genética , ADN Complementario/metabolismo , Proteínas de Peces/química , Proteínas de Peces/metabolismo , Peces Planos/metabolismo , Lipopolisacáridos/farmacología , Moléculas de Patrón Molecular Asociado a Patógenos/metabolismo , Filogenia , ARN Mensajero/genética , ARN Mensajero/metabolismo , Reacción en Cadena en Tiempo Real de la Polimerasa/veterinaria , Alineación de Secuencia/veterinaria , Vitronectina/química , Vitronectina/metabolismo
17.
Ecotoxicol Environ Saf ; 145: 227-234, 2017 Nov.
Artículo en Inglés | MEDLINE | ID: mdl-28738206

RESUMEN

Vitronectin-like protein (VN) is widely found outside plant plasma membranes. The VN molecular surface contains a large number of active groups that combine strongly with rare earth elements (REEs), which means that VN is a preferential binding target for REEs exhibiting their toxic effects, but the toxicological mechanism remains unknown. This study used transmission electron microscopy, circular dichroism, fluorescence spectrometry, ultraviolet-visible spectroscopy, X-ray photoelectron spectroscopy, and calculational chemistry (homology modeling, molecular dynamics simulation and quantum chemical calculation) to preliminarily investigate the effect of lanthanum [La(III)] as an REE, on the structure of VN and its toxicological mechanism. The results showed that low-concentration La(III) could cause micro-interference to the VN molecular structure through weak interactions, such as electrostatic attraction. High-concentration La(III) formed stable complexes with VN, which changed the average binding energy and electron cloud density of VN, loosened the molecular structure and increased the disorder of VN molecule. The results of building a 3D model of VN and simulating the interaction between La(III) and VN using calculational chemistry showed that La(H2O)73+ in solution could coordinately bind to the carboxyl-/carbonyl-O groups in the negatively charged areas on the VN molecular surface. Furthermore, one or more strong H-bonds were formed to enhance the stability of the La(H2O)73+-VN complexes. In summary, low La(III) concentrations could cause micro-interference to the VN molecular structure, whereas high La(III) concentrations could coordinately bind to VN to form stable La-VN complexes, which destroyed the molecular structure of VN; thus the toxicological basis by which La(III) exhibits its toxic effects is its binding to VN.


Asunto(s)
Arabidopsis/metabolismo , Lantano/toxicidad , Proteínas de Plantas/metabolismo , Contaminantes del Suelo/toxicidad , Vitronectina/metabolismo , Arabidopsis/efectos de los fármacos , Membrana Celular/metabolismo , Membrana Celular/ultraestructura , Dicroismo Circular , Lantano/química , Simulación de Dinámica Molecular , Proteínas de Plantas/química , Unión Proteica , Conformación Proteica , Teoría Cuántica , Contaminantes del Suelo/química , Espectrometría de Fluorescencia , Vitronectina/química
18.
Biochemistry ; 55(31): 4386-98, 2016 08 09.
Artículo en Inglés | MEDLINE | ID: mdl-27416303

RESUMEN

Plasminogen activator inhibitor type 1 (PAI-1) regulates the fibrinolysis pathway by inhibiting the protease activity of plasminogen activators. PAI-1 works in concert with vitronectin (VN), an extracellular protein that aids in localization of active PAI-1 to tissues. The Peterson laboratory demonstrated that Cu(II) and other transition metals modulate the stability of PAI-1, exhibiting effects that are dependent on the presence or absence of the somatomedin B (SMB) domain of VN. The study presented here dissects the changes in molecular dynamics underlying the destabilizing effects of Cu(II) on PAI-1. We utilize backbone amide hydrogen/deuterium exchange monitored by mass spectrometry to assess PAI-1 dynamics in the presence and absence of Cu(II) ions with and without the SMB domain of VN. We show that Cu(II) produces an increase in dynamics in regions important for the function and overall stability of PAI-1, while the SMB domain elicits virtually the opposite effect. A mutant form of PAI-1 lacking two N-terminal histidine residues at positions 2 and 3 exhibits similar increases in dynamics upon Cu(II) binding compared to that of active wild-type PAI-1, indicating that the observed structural effects are not a result of coordination of Cu(II) to these histidine residues. Finally, addition of Cu(II) results in an acceleration of the local unfolding kinetics of PAI-1 presumed to be on pathway to the latency conversion. The effect of ligands on the dynamics of PAI-1 adds another intriguing dimension to the mechanisms for regulation of PAI-1 stability and function.


Asunto(s)
Cobre/metabolismo , Inhibidor 1 de Activador Plasminogénico/química , Inhibidor 1 de Activador Plasminogénico/metabolismo , Secuencia de Aminoácidos , Sitios de Unión , Medición de Intercambio de Deuterio/métodos , Fibrinólisis , Histidina/química , Humanos , Cinética , Ligandos , Modelos Moleculares , Simulación de Dinámica Molecular , Proteínas Mutantes/química , Proteínas Mutantes/genética , Proteínas Mutantes/metabolismo , Inhibidor 1 de Activador Plasminogénico/genética , Unión Proteica , Conformación Proteica , Dominios y Motivos de Interacción de Proteínas , Estabilidad Proteica , Proteínas Recombinantes/química , Proteínas Recombinantes/genética , Proteínas Recombinantes/metabolismo , Somatomedinas/química , Somatomedinas/metabolismo , Respuesta de Proteína Desplegada , Vitronectina/química , Vitronectina/metabolismo
19.
Am J Physiol Lung Cell Mol Physiol ; 310(11): L1206-17, 2016 06 01.
Artículo en Inglés | MEDLINE | ID: mdl-27106291

RESUMEN

Transforming growth factor-ß (TGF-ß) is a critical driver of acute lung injury and fibrosis. Injury leads to activation of TGF-ß, which regulates changes in the cellular and matrix makeup of the lung during the repair and fibrosis phase. TGF-ß can also initiate alveolar epithelial cell (AEC) apoptosis. Injury leads to destruction of the laminin-rich basement membrane, which is replaced by a provisional matrix composed of arginine-glycine-aspartate (RGD) motif-containing plasma matrix proteins, including vitronectin and fibronectin. To determine the role of specific matrix proteins on TGF-ß-induced apoptosis, we studied primary AECs cultured on different matrix conditions and utilized mice with deletion of vitronectin (Vtn(-/-)) or mice in which the vitronectin RGD motif is mutated to nonintegrin-binding arginine-glycine-glutamate (RGE) (Vtn(RGE/RGE)). We found that AECs cultured on fibronectin and vitronectin or in wild-type mouse serum are resistant to TGF-ß-induced apoptosis. In contrast, AECs cultured on laminin or in serum from Vtn(-/-) or Vtn(RGE/RGE) mice undergo robust TGF-ß-induced apoptosis. Plasminogen activator inhibitor-1 (PAI-1) sensitizes AECs to greater apoptosis by disrupting AEC engagement to vitronectin. Inhibition of integrin-associated signaling proteins augments AEC apoptosis. Mice with transgenic deletion of PAI-1 have less apoptosis after bleomycin, but deletion of vitronectin or disruption of the vitronectin RGD motif reverses this protection, suggesting that the proapoptotic function of PAI-1 is mediated through vitronectin inhibition. Collectively, these data suggest that integrin-matrix signaling is an important regulator of TGF-ß-mediated AEC apoptosis and that PAI-1 functions as a natural regulator of this interaction.


Asunto(s)
Células Epiteliales Alveolares/fisiología , Apoptosis , Factor de Crecimiento Transformador beta/fisiología , Vitronectina/fisiología , Secuencias de Aminoácidos , Animales , Células Cultivadas , Integrinas/metabolismo , Ratones Endogámicos C57BL , Ratones Noqueados , Dominios y Motivos de Interacción de Proteínas , Transducción de Señal , Vitronectina/química
20.
Nat Mater ; 14(5): 523-31, 2015 May.
Artículo en Inglés | MEDLINE | ID: mdl-25707020

RESUMEN

Although biochemically patterned hydrogels are capable of recapitulating many critical aspects of the heterogeneous cellular niche, exercising spatial and temporal control of the presentation and removal of biomolecular signalling cues in such systems has proved difficult. Here, we demonstrate a synthetic strategy that exploits two bioorthogonal photochemistries to achieve reversible immobilization of bioactive full-length proteins with good spatial and temporal control within synthetic, cell-laden biomimetic scaffolds. A photodeprotection-oxime-ligation sequence permits user-defined quantities of proteins to be anchored within distinct subvolumes of a three-dimensional matrix, and an ortho-nitrobenzyl ester photoscission reaction facilitates subsequent protein removal. By using this approach to pattern the presentation of the extracellular matrix protein vitronectin, we accomplished reversible differentiation of human mesenchymal stem cells to osteoblasts in a spatially defined manner. Our protein-patterning approach should provide further avenues to probe and direct changes in cell physiology in response to dynamic biochemical signalling.


Asunto(s)
Materiales Biomiméticos/química , Diferenciación Celular , Hidrogeles/química , Proteínas Inmovilizadas/química , Células Madre Mesenquimatosas/metabolismo , Osteoblastos/metabolismo , Humanos , Células Madre Mesenquimatosas/citología , Osteoblastos/citología , Procesos Fotoquímicos , Andamios del Tejido/química , Vitronectina/química
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