In vivo assessment of protease dynamics in cutaneous wound healing by degradomics analysis of porcine wound exudates.

Proteases control complex tissue responses by modulating inflammation, cell proliferation and migration, and matrix remodeling. All these processes are orchestrated in cutaneous wound healing to restore the skin's barrier function upon injury. Altered protease activity has been implicated in the pathogenesis of healing impairments, and proteases are important targets in diagnosis and therapy of this pathology. Global assessment of proteolysis at critical turning points after injury will define crucial events in acute healing that might be disturbed in healing disorders. As optimal biospecimens, wound exudates contain an ideal proteome to detect extracellular proteolytic events, are noninvasively accessible, and can be collected at multiple time points along the healing process from the same wound in the clinics. In this study, we applied multiplexed Terminal Amine Isotopic Labeling of Substrates (TAILS) to globally assess proteolysis in early phases of cutaneous wound healing. By quantitative analysis of proteins and protein N termini in wound fluids from a clinically relevant pig wound model, we identified more than 650 proteins and discerned major healing phases through distinctive abundance clustering of markers of inflammation, granulation tissue formation, and re-epithelialization. TAILS revealed a high degree of proteolysis at all time points after injury by detecting almost 1300 N-terminal peptides in ∼450 proteins. Quantitative positional proteomics mapped pivotal interdependent processing events in the blood coagulation and complement cascades, temporally discerned clotting and fibrinolysis during the healing process, and detected processing of complement C3 at distinct time points after wounding and by different proteases. Exploiting data on primary cleavage specificities, we related candidate proteases to cleavage events and revealed processing of the integrin adapter protein kindlin-3 by caspase-3, generating new hypotheses for protease-substrate relations in the healing skin wound in vivo. The data have been deposited to the ProteomeXchange Consortium with identifier PXD001198.

Comparative bonding behavior of functional cyclopentadienyl ligands and boron-containing analogues in heterometallic complexes and clusters.

The reactivity of isolobal molybdenum carbonylmetalates containing a 2-boratanaphthalene, [Mo(eta5-2,4-MeC9H6BMe)(CO)3]- (5a) and [Mo(eta5-2,4-MeC9H6BNi-Pr2)(CO)3]- (5b), a 1-boratabenzene, [Mo(eta5-3,5-Me2C5H3BNi-Pr2)(CO)3]- (8), or a functionalized cyclopentadienyl ligand, the new metalate [Mo(eta5-C5H4Ph)(CO)3]- (7) and [Mo(eta5-C5H4NMe2)(CO)3]- (9), toward palladium (I and II) or platinum (I and II) complexes, such as trans-[PdCl2(NCPh)2], [Pd2(NCMe)6](BF4)2, trans-[PtCl2(PEt3)2], and [N(n-Bu)4]2 [Pt2Cl4(CO)2], has been investigated, and this has allowed an evaluation of the influence of the pi-bonded ligands on the structures and unprecedented coordination modes observed in the resulting metal-metal-bonded heterometallic clusters. The new 58 CVE planar-triangulated centrosymmetric clusters, [Mo2Pd2(eta5-C5H4Ph)2(CO)6(PEt3)2] (11), [Mo2Pd2(eta5-2,4-MeC9H6BNi-Pr2)2(CO)6] (12), [Mo(2)Pd(2)(eta5-3,5-Me2C5H3BNi-Pr2)2(CO)6] (13), [Mo2Pd2(eta5-C5H4NMe2)2(CO)6(PEt3)2] (15), [Mo2Pt2(eta5-C5H4NMe2)2(CO)6(PEt3)2] (16), and [Mo2Pt2(eta5-C5H4NMe2)2(CO)8] (20), have been characterized by single-crystal X-ray diffraction. Their structural features were compared with those of the 54 CVE cluster [Re2Pd2(eta5-C4H4BPh)2(CO)6)] (4), previously obtained from the borole-containing metalate [Re(eta5-C4H4BPh)(CO)3]- (2), in which a 2e-3c B-C(ipso)-Pd interaction involving the pi-ring was observed. As an extension of what has been observed in 4, clusters 12 and 13 present a direct interaction of the boratanaphthalene (12) and the boratabenzene (13) ligands with palladium. In clusters 11, 15, 16, and 20, the pi-ring does not interact with the palladium (11 and 15) or platinum centers (16 and 20), which confers to these clusters a geometry very similar to that of [Mo2Pd2(eta5-C5H5)2(CO)6(PEt3)2] (3b). The carbonylmetalates [Mo(pi-ring)(CO)3]- are thus best viewed as formal four electron donors which bridge a dinuclear d9-d9 unit. The orientation of this building block in the clusters influences the shape of their metal cores and the bonding mode of the bridging carbonyl ligands. The crystal structure of new centrosymmetric complex [Mo(eta5-C5H4Ph)(CO)3]2 (10) was determined, and it revealed intramolecular contacts of 2.773(4) A between the carbon atoms of carbonyl groups across the metal-metal bond and intermolecular bifurcated interactions between the carbonyl oxygen atoms (2.938(4) and 3.029(4) A), as well as intermolecular C-H...pi(Ar)(C=C) interactions (2.334(3) and 2.786(4) A) involving the phenyl substituents.

Organometallic building blocks with amino-substituted cyclopentadienyl and boratabenzene ligands for the synthesis of heterometallic complexes and clusters.

A comparative study of the reactivity of isolobal rhenium and molybdenum carbonylmetallates containing a borole, in [Re(eta5-C4H4BPh)(CO)3]- (2), a boratanaphthalene, in [Mo(eta5-2,4-MeC9H6BMe)(CO)3]- (4a) and [Mo(eta5-2,4-MeC9H6BNi-Pr2)(CO)3]- (4b), a boratabenzene, in [Mo(eta5-3,5-Me2C5H3BNi-Pr2)(CO)3]- (6) or a dimethylaminocyclopentadienyl ligand, in [Mo(eta5-C5H4NMe2)(CO)3]- (7), toward palladium(II), gold(I), mercury(II) and platinum(II) complexes has allowed an evaluation of the role of these pi-bonded ligands on the structures and unprecedented coordination modes observed in the resulting metal-metal bonded, heterometallic complexes. The new metallate 6 was reacted with [AuCl(PPh3)], and with 1 or 2 equiv. HgCl2, which afforded the new heterodinuclear complexes [Au{Mo(eta5-3,5-Me2C5H3BNi-Pr2)(CO)3}(PPh3)] (Mo-Au) (10) and [Hg{Mo(eta5-3,5-Me2C5H3BNi-Pr2)(CO)3}Cl] (Hg-Mo) (11) and the heterometallic chain complex [Hg{Mo(eta5-3,5-Me2C5H3BNi-Pr2)(CO)3}2] (Mo-Hg-Mo) (12), respectively. Reactions of the new metallate 7 with HgCl2, trans-[PtCl2(CNt-Bu)2] and trans-[PtCl2(NCPh)2] yielded the heterodinuclear complex [Hg{Mo(eta5-C5H4NMe2)(CO)3}Cl] (Mo-Hg) (15), the heterotrinuclear chain complexes trans-[Pt{Mo(eta5-C5H4NMe2)(CO)3}2(CNt-Bu)2] (Mo-Pt-Mo) (16) and trans-[Pt{Mo(eta5-C5H4NMe2)(CO)3}2(NCPh)2] (Mo-Pt-Mo) (17), the mononuclear complex [Mo(eta5-C5H4NMe2)(CO)3Cl] (18), the lozenge-type cluster [Mo2Pt2(eta5-C5H4NMe2)2(CO)8] (19) and the heterodinuclear complex [[upper bond 1 start]Pt{Mo(eta5-C5H4N[upper bond 1 end]Me2)(CO)3}(NCPh)Cl](Mo-Pt) (20), respectively. The complexes 11, 16, 17.2THF, 18 and 20 have been structurally characterized by X-ray diffraction and 20 differs from all other compounds in that the dimethylaminocyclopentadienyl ligand forms a bridge between the metals.