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1.
Arch Anim Nutr ; : 1-17, 2024 Jun 22.
Artigo em Inglês | MEDLINE | ID: mdl-38907616

RESUMO

In Africa, a wide variety of diets (forage + crop co-products or other agricultural by-products) is being used by livestock farmers in different production systems to adapt to climate change. This study aimed to assess the performance of various local feeding strategies on Sudanese Fulani zebu cattle. Two experiments were carried out on 10 steers aged initially 33 months (142 kg body weight - BW). The animals were fed eight different diets at an intake level of 3.2% LW in dry matter (DM), including two control diets of 100% rangeland forage (100% RF) and six experimental diets made up of forage and crop co-products (75:25 DM ratio). In the first experiment, the control diet was made up of rangeland forage (RF) and supplements consisted of four cereal co-products (CC), i.e. maize, sorghum, millet, and rice straws. In the second experiment, the control diet consisted of Panicum maximum (Pmax) hay, and the supplements tested were two legume co-products (LC), i.e. cowpea and peanut haulms. Each experiment lasted 3 weeks, including 2 weeks of adaptation to the diet and 1 week of data collection on individual animals (intake, apparent digestibility, and enteric methane). The NDF content of the diets was different within each experiment (p < 0.05). Among diets containing CC, DM intake [g/kg BW] was significantly higher (+31%; p = 0.025) for the diet containing rice straw than for the other diets, which showed similar levels to the RF diet. Among diets containing LC, intake was significantly higher (p = 0.004) than for the Pmax diet. Intake was higher for the peanut haulm diet than for the cowpea haulm diet. The DM digestibility was similar between the different diets in each experiment. Enteric methane (eCH4) yield [g/kg DMI] from the CC and LC-containing diets were reduced by an average of 23% and 20% compared to the RF and Pmax control diets respectively. Raising awareness among agro-pastoralists about the use of crop co-products offers real prospects for eCH4 emissions mitigation in the Sahel region.

2.
Trop Anim Health Prod ; 54(2): 143, 2022 Mar 26.
Artigo em Inglês | MEDLINE | ID: mdl-35347435

RESUMO

The West African shorthorn Lagune cattle has long been incriminated as of low productivity and subjected to gradual replacement or indiscriminate crossbreeding with zebu breeds. But there are still insufficient studies reporting the productive and reproductive performances of this breed under village conditions. This study aimed to evaluate the productive and reproductive performances of the Lagune cattle herds kept under village conditions in two agroecological zones in Southern Benin. Sixteen herds (seven in the Oueme Valley zone and nine in the Pobe zone), chosen from a previous retrospective survey, were regularly visited on a bi-monthly basis between January 2018 and February 2019. At the first visit to each selected herd, all animals present were identified, their ages determined through their dentition, and their breeding history recorded. At each subsequent visit, information on calving, birth weights, herd entries and exits, disease incidence, and changes in the physiological status of the animals were recorded. In addition, all suckling calves from birth to 6 months of age were weighted and measured. The average age at first calving was 37.2 ± 3.5 months and varied from 3 to 4 years. With no significant variations between agroecological zones, the parturition rate, fertility rate, fecundity rate, and abortion rate were, respectively, 74.3% ± 10.7, 77.0% ± 12.0, 68.9% ± 9.1, and 2.7% ± 1.4. The overall annual mortality rate and perinatal mortality rate were 8.4% ± 3.1 and 7.3% ± 2.7, respectively. The annual offtake rate was 12.9% ± 4.3 and varied significantly (P ≤ 0.05) between zones. The average birth weight varied significantly (P ≤ 0.05) between sex and was 10.2 ± 0.7 kg and 10.8 ± 0.9 kg for female and male, respectively. The average daily body weight gain of calves, calculated over the period from birth to 6 months of age, was 160.5 ± 8.5 g/day. In addition to environmental conditions, individual farmers' management practices varied significantly among herds and probably influenced the recorded reproductive and productive performances. The estimates of reproductive parameters obtained in this study suggest a good reproductive ability of the Lagune breed which could be improved with better management conditions.


Assuntos
Hibridização Genética , Reprodução , Animais , Benin/epidemiologia , Bovinos , Fazendeiros , Feminino , Humanos , Masculino , Gravidez , Reprodução/fisiologia , Estudos Retrospectivos
3.
Trop Anim Health Prod ; 53(1): 133, 2021 Jan 21.
Artigo em Inglês | MEDLINE | ID: mdl-33474596

RESUMO

In order to identify the most promising browse species for sustaining goat production, the nutritional characteristics of leaves of trees and shrubs and their use in farmers' feeding strategies were assessed in sub-humid areas of Benin. Two hundred and forty (240) goat farmers were surveyed and their uses of different leaves of trees and shrubs for supplementing their goats documented in two vegetation zones, namely the Sudano-Guinean and Guineo-Congolese zones. Then, samples of 32 leaves were collected at the end of rainy season in October-November, just before the long dry season and analyzed for their chemical composition, in vitro digestibility, and tannin content. Principal component and cluster analyses were performed to identify homogenous groups of leaves on the basis of their nutritional characteristics. Free grazing on natural perennial grasses with supplementation with leaves of trees and shrubs was the main goat feeding practice during the dry season in both zones. Agro-processing by-products were used as feed supplements mainly in the Guineo-Congolese zone. Most of the leaves of trees and shrubs elicited by the surveyed goat farmers had a crude protein content higher than 15%, sufficient for their use as feed supplements. However, this potential could be limited by their high tannin content. One non-native (Gliricidia sepium) and five native shrub species (Ficus thonningii, Antiaris africana, Phyllanthus discoideus, Morinda lucida, Mallotus oppositifolius) were identified as the most promising for supplementing goats during dry season in both zones. Our study was useful in identifying some underutilized and neglected leaves of trees and shrubs that could be recommended to smallholder goat farmers in agroforestry systems for enhancing animal productivities in small-scale farms.


Assuntos
Ração Animal/análise , Cabras , Valor Nutritivo , Folhas de Planta/química , Árvores , África Ocidental , Animais , Benin
4.
BMC Genomics ; 21(1): 783, 2020 Nov 11.
Artigo em Inglês | MEDLINE | ID: mdl-33176675

RESUMO

BACKGROUND: Specific adaptive features including disease resistance and growth abilities in harsh environments are attributed to indigenous cattle breeds of Benin, but these breeds are endangered due to crossbreeding. So far, there is a lack of systematic trait recording, being the basis for breed characterizations, and for structured breeding program designs aiming on conservation. Bridging this gap, own phenotyping for morphological traits considered measurements for height at withers (HAW), sacrum height (SH), heart girth (HG), hip width (HW), body length (BL) and ear length (EL), including 449 cattle from the four indigenous Benin breeds Lagune, Somba, Borgou and Pabli. In order to utilize recent genomic tools for breed characterizations and genetic evaluations, phenotypes for novel traits were merged with high-density SNP marker data. Multi-breed genetic parameter estimations and genome-wide association studies (GWAS) for the six morphometric traits were carried out. Continuatively, we aimed on inferring genomic regions and functional loci potentially associated with conformation, carcass and adaptive traits. RESULTS: SNP-based heritability estimates for the morphometric traits ranged between 0.46 ± 0.14 (HG) and 0.74 ± 0.13 (HW). Phenotypic and genetic correlations ranged from 0.25 ± 0.05 (HW-BL) to 0.89 ± 0.01 (HAW-SH), and from 0.14 ± 0.10 (HW-BL) to 0.85 ± 0.02 (HAW-SH), respectively. Three genome-wide and 25 chromosome-wide significant SNP positioned on different chromosomes were detected, located in very close chromosomal distance (±25 kb) to 15 genes (or located within the genes). The genes PIK3R6 and PIK3R1 showed direct functional associations with height and body size. We inferred the potential candidate genes VEPH1, CNTNAP5, GYPC for conformation, growth and carcass traits including body weight and body fat deposition. According to their functional annotations, detected potential candidate genes were associated with stress or immune response (genes PTAFR, PBRM1, ADAMTS12) and with feed efficiency (genes MEGF11 SLC16A4, CCDC117). CONCLUSIONS: Accurate measurements contributed to large SNP heritabilities for some morphological traits, even for a small mixed-breed sample size. Multi-breed GWAS detected different loci associated with conformation or carcass traits. The identified potential candidate genes for immune response or feed efficiency indicators reflect the evolutionary development and adaptability features of the breeds.


Assuntos
Estudo de Associação Genômica Ampla , Polimorfismo de Nucleotídeo Único , Animais , Bovinos/genética , Genoma , Genômica , Fenótipo
5.
J Anim Breed Genet ; 137(6): 622-640, 2020 Nov.
Artigo em Inglês | MEDLINE | ID: mdl-32672901

RESUMO

The indigenous cattle population of Benin is a diverse mix of taurine and hybrid breeds shaped by diverse ecological and climatic conditions with eight agro-ecological zones (AEZ). Presumably, the taurine breeds face current endangerment due to ongoing indicine introgression following climate change and transboundary transhumance. The aim of the study was to investigate the genetic diversity and population structure of the indigenous breeds Lagune, Somba, Pabli and Borgou considering spatial agro-ecological and socio-economic factors (transhumance) based on 50k SNP and microsatellite data. Among the four sampled breeds, six genetic clusters were identified using model-free (discriminant analysis of principal components) and model-based (TESS and ADMIXTURE) methods separating taurine from hybrid breeds. Results based on an extension with publicly available historic SNP data sets from taurine and indicine West African cattle and additional outgroups provided additional insight into changes of genetic structure in the sampled breeds over time. Both taurine breeds, Somba and Lagune, showed a stable foundation but also spatially limited partial indicine introgression associated with transhumance leading to high genetic diversity. In addition, we found evidence for spatial diversity and changes in genetic structure over time in the Borgou breed in comparison of our samples with the historic samples which could be explained by potential continuous indicine introgression into the Borgou breed in two sample regions. Results for the Pabli breed do not conclusively point to full absorbance by the Borgou in comparison with all available Borgou samples. Further research is needed in this regard.


Assuntos
Cruzamento , Variação Genética/genética , Genética Populacional , Agricultura , Animais , Benin , Bovinos , Análise Discriminante , Ecologia
6.
Trop Anim Health Prod ; 52(2): 803-814, 2020 Mar.
Artigo em Inglês | MEDLINE | ID: mdl-31617051

RESUMO

This study explored the potential role of agro-ecology in shaping the morphology of Lagune cattle population of Benin. A total of 708 adult Lagune cattle were sampled randomly from nine provenances in two agro-ecological zones (AEZs) and were assessed for eight qualitative and twelve linear body measurements. Data were analyzed using generalized linear model procedures (PROC GLM) followed by the multiple comparison of least square means (LSMEAN) according to the Tukey-Kramer method and multivariate analytical methods, including canonical discrimination analysis (CDA) and hierarchical ascendant classification. Irrespective of AEZ and sex, the body length (102.3 ± 9.31 cm) was greater than the wither height (93.1 ± 7.39 cm) and the body index smaller than 0.85. However, there were significant differences between the two AEZs for most of the measured morphometric and qualitative traits. Moreover, a male-biased sexual size dimorphism was recorded. The CDA based on only four basic body measurements (rump height, body length, heart girth, and ear length) and the calculated Mahalanobis distances suggest that the populations from the two AEZs are distinct and could be further considered ecotypes. Nevertheless, the overall moderate classification rate (70%) of the individual animals into their group of origin indicates interbreeding between the two populations. The pairwise Mahalanobis distances between provenances in the same AEZ were also significant. Together, these results provide supporting evidence for the existence of subdivisions in the Lagune cattle populations from South Benin. The high morphological diversity in the Lagune cattle recorded in the present study could serve as a starting point for the development of efficient selection and sound subpopulation management strategies but also for further phenotypic and genetic characterizations.


Assuntos
Bovinos/anatomia & histologia , Bovinos/classificação , Animais , Benin , Bovinos/genética , Distribuição de Qui-Quadrado , Análise Discriminante , Ecótipo , Feminino , Cabelo/anatomia & histologia , Cornos/anatomia & histologia , Análise dos Mínimos Quadrados , Modelos Lineares , Masculino , Análise Multivariada , Fenótipo , Caracteres Sexuais , Tempo (Meteorologia)
7.
Trop Anim Health Prod ; 48(2): 349-59, 2016 Feb.
Artigo em Inglês | MEDLINE | ID: mdl-26590609

RESUMO

The objective of this study was to characterize the declining Somba cattle population in its production system context. Two-hundred-twenty-four (224) cattle farm-households were surveyed in the Boukombe district, the natural habitat of the breed in North-West Benin. Information on their socioeconomic characteristics and on their herd management practices were recorded using a semi-structured questionnaire. In addition, 15 body measurements were recorded from 102 adult cattle. Three types of breeders were distinguished: the owners-herders (54.0 %); the absentee owners (40.2 %) and the professional herders (5.8 %). The average cattle herd sizes were 4.7 ± 3.70 and 58.6 ± 22.83 heads for owner-managed and entrusted herds, respectively. Offtakes were more associated with sociocultural purposes (75.5 %) than market. While crop farming was the main occupation and income source of their owners, the Somba cattle were used for ploughing during the rainy season. In contrast to the widely accepted belief that this indigenous genetic resource is mainly threatened by crossbreeding and/or replacement, our findings suggest high mortalities due to diseases, feed and water shortages and poor reproduction management as the main causes of the decline of this cattle population. Somba cattle generally have short horns and a small body size. However, bulls have significantly (P ≤ 0.05) longer horns (21.2 ± 16.44 cm against 13.9 ± 7.21 cm), higher height at withers (99.7 ± 6.97 cm against 95.9 ± 5.76 cm) and body length (149.7 ± 12.87 cm against 146.8 ± 11.01 cm) than cows. All surveyed farmers expressed their willingness and readiness to participate in and contribute materially or financially to any program towards a sustainable use and preservation of this breed which they perceived as hardy and embedded in their culture. We therefore argue that strategies for its sustainable use and conservation should consist of simultaneously improving general herd management practices, organizing farmers and involving them in participatory breed improvement programs.


Assuntos
Criação de Animais Domésticos/economia , Doenças dos Bovinos/epidemiologia , Bovinos/fisiologia , Agricultura , Animais , Benin , Cruzamento , Características da Família , Feminino , Humanos , Hibridização Genética , Masculino , Estações do Ano , Inquéritos e Questionários , Clima Tropical
8.
Front Genet ; 14: 1079048, 2023.
Artigo em Inglês | MEDLINE | ID: mdl-37007955

RESUMO

Improved knowledge of the diversity within and among local animal populations is increasingly necessary for their sustainable management. Accordingly, this study assessed the genetic diversity and structure of the indigenous goat population of Benin. Nine hundred and fifty-four goats were sampled across the three vegetation zones of Benin [i.e., Guineo-Congolese zone (GCZ), Guineo-Sudanian zone (GSZ), and Sudanian zone (SZ)] and genotyped with 12 multiplexed microsatellite markers. The genetic diversity and structure of the indigenous goat population of Benin were examined using the usual genetic indices (number of alleles Na, expected and observed heterozygosities He and Ho, Fixation index FST, coefficient of genetic differentiation GST), and three different methods of structure assessment [Bayesian admixture model in STRUCTURE, self-organizing map (SOM), and discriminant analysis of principal components (DAPC)]. The mean values of Na (11.25), He (0.69), Ho (0.66), FST (0.012), and GST (0.012) estimated in the indigenous Beninese goat population highlighted great genetic diversity. STRUCTURE and SOM results showed the existence of two distinct goat groups (Djallonké and Sahelian) with high crossbreeding effects. Furthermore, DAPC distinguished four clusters within the goat population descending from the two ancestry groups. Clusters 1 and 3 (most individuals from GCZ) respectively showed a mean Djallonké ancestry proportion of 73.79% and 71.18%, whereas cluster 4 (mainly of goats from SZ and some goats of GSZ) showed a mean Sahelian ancestry proportion of 78.65%. Cluster 2, which grouped almost all animals from the three zones, was also of Sahelian ancestry but with a high level of interbreeding, as shown by the mean membership proportion of only 62.73%. It is therefore urgent to develop community management programs and selection schemes for the main goat types to ensure the sustainability of goat production in Benin.

9.
Heliyon ; 9(8): e19172, 2023 Aug.
Artigo em Inglês | MEDLINE | ID: mdl-37664723

RESUMO

The productivity of livestock, including small ruminants, in Benin, is very low, and their management practices in terms of feeding, health and reproduction do not ensure their optimal production. This research aimed to assess the willingness of sheep and goat keepers to pay for an improved breeding system. Data collection from 118 sheep and 375 goat breeders selected in six agroecological zones of Benin was undertaken using the choice experiments. The mixed logit model revealed heterogeneity in the preferences of small ruminant keepers for breeds, feeding practices, health treatments and reproductive control. This heterogeneity of preferences was confirmed by the latent class logit model results, which revealed the existence of four classes of sheep breeders and three classes of goat breeders. Irrespective of species, small ruminant breeders were generally willing to use herbal medicine or combine it with modern veterinary medicine and adopt Sahelian breeds or crossbreeds (Sahelian x Djallonke). They were not willing to adapt neither zero grazing nor controlled reproduction. The combination of the coefficient estimates of the latent class logit model and the determinants of class membership showed that herders in southern Benin with small and monospecific herds were the most willing to introduce changes in their breeding system.

10.
Trop Anim Health Prod ; 44(7): 1631-42, 2012 Oct.
Artigo em Inglês | MEDLINE | ID: mdl-22430479

RESUMO

We undertook a comparative analysis of (peri-)urban livestock production strategies across three West African cities. Using a semi-structured questionnaire, livestock-keeping households (HH) were interviewed in Kano/Nigeria (84 HH), Bobo Dioulasso/Burkina Faso (63 HH) and Sikasso/Mali (63 HH). Questions covered livestock species kept, herd sizes and structure, feeds used, manure management, livestock marketing and production constraints. Sheep and goats dominated (p < 0.001) in Kano (76 and 75 % of HH) compared to Bobo Dioulasso (48 and 40 %) and Sikasso (28 and 40 %), while cattle and poultry were more frequent (p < 0.001) in Bobo Dioulasso (82 and 69 % of HH) and Sikasso (65 and 79 %) than in Kano (29 and 20 %). Across cities, ruminant feeding relied on grazing and homestead supplementation with fresh grasses, crop residues, cereal brans and cottonseed cake; cereal grains and brans were major ingredients of poultry feeds. Cattle and sheep fetched highest prices in Kano, unit prices for goats and chicken were highest in Sikasso. Across cities there was little association of gardens and livestock, whereas field cropping and livestock were integrated. There was no relation between the education of the HH head and the adoption of improved management practices (p > 0.05), but the proportion of HH heads with a long-term experience in UPA activities was higher in Kano and in Bobo Dioulasso than in Sikasso (p < 0.001). We therefore postulate that the high illiteracy rate among (peri-)urban livestock keepers in West Africa does not threaten the acceptance of improved technologies and innovations supporting the sustainability of their livestock production.


Assuntos
Criação de Animais Domésticos/métodos , Galinhas , Gado , Criação de Animais Domésticos/economia , Animais , Burkina Faso , Cidades , Mali , Nigéria , Fatores Socioeconômicos , Inquéritos e Questionários
11.
Animals (Basel) ; 12(3)2022 Feb 04.
Artigo em Inglês | MEDLINE | ID: mdl-35158700

RESUMO

This study investigates the motivations and breeding practices of farmers keeping Dahomey cattle in European countries. Data were collected using a web-based open-closed questionnaire survey targeting 55 farmers from Germany, Switzerland and Austria. Descriptive analyses revealed that the earliest European Dahomey herds were established in 2005. Moreover, interest in the breed recently increased as 63.7% of the investigated farmers established their herds between 2016 and 2020. The average herd size comprises seven Dahomey cattle, kept for managing grassland (59.3%), for production of meat or as breeding stock (32.1%) and for a hobby (8.6%). The animals are mostly kept in grazing systems throughout the year, partly fattened with supplement feeds. The low disease incidence and no need for extra health care in the herds indicate the robustness of the breed. Furthermore, meat quality, calving ease, small size, calm character and low feed requirements of Dahomey cattle were valued by the farmers. For the preservation of these features, farmers confirmed their enthusiasm to support any breeding and conservation program of this smallholder breed in Europe and Benin. This study highlights the importance of small-sized cattle for sustainable breeding systems and with regard to ecosystem management practices.

12.
Vet Anim Sci ; 14: 100210, 2021 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-34693073

RESUMO

The aim of this research was to compare the zootechnical performances of indigenous and Maradi goats reared under village conditions in the Sudanian zone of Benin. A questionnaire survey was carried out between August and October 2019, using the 12MO, a retrospective method for estimating demographic parameters in tropical ruminant livestock population and the progeny history method. Information related to farmers' socioeconomic characteristics, goat herd management practices and demographic parameters, and milk productivity from 198 does including 66 West African Dwarf (WADG), 68 Red Maradi (RMG) and 64 West African long-legged (WLLG) goats were collected in 80 smallholder farms. Pearson Chi-square and Kruskal-Wallis W tests were performed respectively on the categorical and continuous variables. The average herd size was about 16.7 ± 9.0; 5.8 ± 3.1 and 15.4 ± 7.4 heads respectively for WADG, RMG and WLLG. Bucks were absent in several herds where kids (47.9 ± 12.8%) and does (46.6 ± 12.8%) predominated. Prolificacy rates at first and second parturition varied significantly (P ≤ 0.05) among goat types and were respectively 165.2 ± 59.5% and 195.1 ± 66.9% for WADG; 160.3 ± 55.0% and 196.0 ± 53.9% for RMG; 134.4 ± 54.1% and 154.6 ± 51.0% for WLLG. Parturition rates were higher (P ≤ 0.05) in WADG (159.1 ± 49.5%) than in RMG (138.2 ± 49.0%) and WLLG (132.8 ± 47.3%). Likewise, productive rates were higher (P ≤ 0.05) in WADG (277.3 ± 142.3%) than in RMG and WLLG (204.4 ± 125.1% and 168.8 ± 102.2% respectively). Milking was only performed on RMG and the amount of milk collected per milking ranged between 0.6 and 1 liter per doe. Enhancing goat herds' productivity could be achieved through improved general herd management practices.

13.
Front Genet ; 12: 657282, 2021.
Artigo em Inglês | MEDLINE | ID: mdl-34956303

RESUMO

The Dwarf Lagune and the Savannah Somba cattle in Benin are typical representatives of the endangered West African indigenous Shorthorn taurine. The Lagune was previously exported to African and European countries and bred as Dahomey cattle, whereas the Somba contributed to the formation of two indigenous hybrids known as Borgou and Pabli cattle. These breeds are affected by demographic, economic, and environmental pressures in local production systems. Considering current and historical genomic data, we applied a formal test of admixture, estimated admixture proportions, and computed genomic inbreeding coefficients to characterize the five breeds. Subsequently, we unraveled the most recent selection signatures using the cross-population extended haplotype homozygosity approach, based on the current and historical genotypes. Results from principal component analyses and high proportion of Lagune ancestry confirm the Lagune origin of the European Dahomey cattle. Moreover, the Dahomey cattle displayed neither indicine nor European taurine (EUT) background, but they shared on average 40% of autozygosity from common ancestors, dated approximately eight generations ago. The Lagune cattle presented inbreeding coefficients larger than 0.13; however, the Somba and the hybrids (Borgou and Pabli) were less inbred (≤0.08). We detected evidence of admixture in the Somba and Lagune cattle, but they exhibited a similar African taurine (AFT) ancestral proportion (≥96%) to historical populations, respectively. A moderate and stable AFT ancestral proportion (62%) was also inferred for less admixed hybrid cattle including the Pabli. In contrast, the current Borgou samples displayed a lower AFT ancestral proportion (47%) than historical samples (63%). Irrespective of the admixture proportions, the hybrid populations displayed more selection signatures related to economic traits (reproduction, growth, and milk) than the taurine. In contrast, the taurine, especially the Somba, presented several regions known to be associated with adaptive traits (immunity and feed efficiency). The identified subregion of bovine leukocyte antigen (BoLA) class IIb (including DSB and BOLA-DYA) in Somba cattle is interestingly uncommon in other African breeds, suggesting further investigations to understand its association with specific adaptation to endemic diseases in Benin. Overall, our study provides deeper insights into recent evolutionary processes in the Beninese indigenous cattle and their aptitude for conservation and genetic improvement.

14.
Genes (Basel) ; 12(11)2021 10 26.
Artigo em Inglês | MEDLINE | ID: mdl-34828308

RESUMO

This study investigated polymorphisms in the milk protein genes CSN1S1, CSN2, CSN1S2, CSN3, LALBA, and LGB, and casein haplotypes in Beninese indigenous cattle. Considering 67 animals, DNA sequencing of the genes' exons, flanking regions and parts of the 5'-upstream regions identified 1058 genetic variants including 731 previously unknown. In addition, four novel milk protein variants were detected, including CSN3K (p.Ala66Val), LALBAF (p.Arg58Trp), LGBB1 (p.Ala134Val) and LGBK (p.Thr92Asnfs*13). CSN3K is caused by a novel SNP (BTA6:85656526C>T, exon 4) whereas LALBAF and LGBB1 are due to rs714688595C>T (exon 1) and rs109625649C>T (exon 4), respectively. Regarding LGBK, a frameshift insertion of one adenine residue at BTA11:103257980 (exon 3) induces a premature translation termination resulting in a 46% reduction of the reference protein sequence. The casein polymorphisms formed five main CSN1S1-CSN2-CSN1S2-CSN3 haplotypes including B-A1-A-B, B-A1-A-A and C-A2-A-B which are predominant in the investigated cattle breeds. Moreover, in silico analyses of polymorphisms within the 5'- and 3'- untranslated regions of all six milk proteins revealed effects on microRNA and transcription factor binding sites. This study suggests a large genetic variation of milk protein genes in Beninese cattle, which should be investigated in further studies for their effects on milk production, including quality and yield traits.


Assuntos
Caseínas/genética , Bovinos/genética , Proteínas do Leite/genética , Animais , Benin , Cruzamento , Caseínas/metabolismo , Bovinos/metabolismo , Cruzamentos Genéticos , Indústria de Laticínios , Feminino , Variação Genética , Haplótipos , Lactação/genética , Lactação/metabolismo , Proteínas do Leite/metabolismo , Polimorfismo de Nucleotídeo Único , Análise de Sequência de DNA/veterinária
15.
PLoS One ; 16(10): e0258761, 2021.
Artigo em Inglês | MEDLINE | ID: mdl-34665825

RESUMO

Knowledge of both the genetic diversity and geographical distribution of animal genetic resources is a prerequisite for their sustainable utilization, improvement and conservation. The present study was undertaken to explore the current morphological variability within the sheep population in Benin as a prelude for their molecular characterization. From November 2018 to February 2020, 25 quantitative linear body measurements and 5 qualitative physical traits were recorded on 1240 adult ewes from the 10 phytogeographic zones that comprise the three vegetation zones of Benin. Fourteen morphological indices were calculated based on the linear body measurements. The collected data were first analyzed using multiple comparisons of least-square means (LSmeans), followed by generalized linear model (GLM) procedures, to explore the relationships among the measured morphometric traits and the 10 phytogeographic zones. Next, the presence of any genetic sub-populations was examined using multivariate analytical methods, including canonical discriminant analysis (CDA) and ascending hierarchical clustering (AHC). Univariate analyses indicated that all quantitative linear body measurements varied significantly (P<0.05) across the phytogeographic zones. The highest values (LSmean± standard error) of withers height (68.3±0.47 cm), sternum height (46.0±0.35 cm), and rump height (68.8±0.47 cm) were recorded in the Mekrou-Pendjari zone, the drier phytogeographic zone in the North, whereas the lowest values, 49.2±0.34, 25.9±0.26, and 52.0±0.35 cm, respectively, were recorded in the Pobe zone in the South. Multivariate analyses revealed the prevalence of four distinct sheep sub-populations in Benin. The sub-population from the South could be assimilated to the short-legged and that from the North to the West African long-legged sheep. The two other sub-populations were intermediate and closer to the crossbreeds or another short-legged sub-breed. The proportion of individuals correctly classified in their group of origin was approximately 74%. These results uncovered a spatial morphological variation in the Beninese sheep population along a South-North phytogeographic gradient.


Assuntos
Ovinos/anatomia & histologia , Ovinos/classificação , Animais , Benin , Biometria , Demografia , Análise Discriminante , Hibridização Genética , Modelos Lineares , Análise Multivariada , Fenótipo , Filogenia
16.
PLoS One ; 14(9): e0222756, 2019.
Artigo em Inglês | MEDLINE | ID: mdl-31557214

RESUMO

Cross-border seasonal livestock movements in West Africa bring into close contact several cattle breeds. In the coastal countries hosting migrating herders from the Sahel, it often affects the genetic variability and geographical distribution of traditional cattle breeds, through their indiscriminate but also intended crossbreeding with larger-framed Sahelian cattle breeds. The need to secure and effectively manage this genetic variability, in order to respond to changing production and market conditions, is widely recognized by the scientific community, livestock herders and policy-makers. This however requires a comprehensive knowledge of the breeds' characteristics. The indigenous criteria used by pastoralists to characterize and distinguish cattle breeds remain unclear and further validation is required. This study was therefore designed to document and validate herders' knowledge on cattle breeds. From June 2015 to June 2016, 803 cattle herders participated in a phenotypic breed description in seven pastoral communities across the country. Each cattle herder was asked to name and describe morphologically the different cattle breeds in his herd. Subsequently, fifteen body measurements taken on a total of 1401 adult cattle (964 cows and 439 bulls) were submitted to multivariate analyses. Participants distinguished ten different cattle breeds kept in traditional herds according to six primary morphological traits and clearly separated zebuine from taurine breeds. These results were consistent with those of the multivariate analyses of the measured traits. However, herders' classification approach proved to be more accurate in distinguishing breeds within the zebuine subspecies. Hence, while metric measurements and molecular genetic analyses are promising approaches to fill the knowledge gap on the diversity of local farm animal genetic resources, they should integrate livestock herders' traditional knowledge for more precision.


Assuntos
Bovinos/genética , Fazendeiros/estatística & dados numéricos , Hibridização Genética , Fenótipo , Competência Profissional/estatística & dados numéricos , Migração Animal , Animais , Benin , Feminino , Variação Genética , Masculino , Análise Multivariada , Característica Quantitativa Herdável
17.
Springerplus ; 4: 281, 2015.
Artigo em Inglês | MEDLINE | ID: mdl-26101733

RESUMO

To better understand the relative importance of the multi-purpose functions of small ruminants for their urban owners and related breeding practices including selection criteria, we undertook a comparative analysis across the West African cities of Kano (Nigeria), Bobo Dioulasso (Burkina Faso) and Sikasso (Mali). Semi-structured questionnaires were used to collect the required information from 301 sheep farmers (100, 102 and 99 in Kano, Bobo Dioulasso and Sikasso) and 306 goat farmers (100, 99 and 107 in Kano, Bobo Dioulasso and Sikasso). Sheep and goats were kept for a variety of reasons including income generation, insurance (sale for cash to meet unexpected expenditures) and economic security (sale for cash to support foreseeable expenses), social/religious functions and prestige in ownership. The relative importance given by respondents to the different functions varied significantly (p < 0.001) across cities and between species within a city. However, irrespective of city, both species were primarily kept for their financial functions whereby sheep were perceived as having higher economic value. Although breeding practices were very similar in many respects (low practice of castration, culling and replacement strategies, uncontrolled mating, no record keeping and selection criteria), the emphasis put on each selection criteria varied across cities and between species. Irrespective of city, most of the goats were of the indigenous type while keeping crossbred animals and/or maintaining more than one genotype in the same flock was more commonly practiced by sheep keepers. This points to a higher motivation for strategic breeding among sheep than goat keepers and indicates that the former might be interested in joining carefully designed participatory flock improvement programs.

18.
Hum Ecol Interdiscip J ; 39(5): 569-581, 2011 Oct.
Artigo em Inglês | MEDLINE | ID: mdl-22039313

RESUMO

This study explores the relation between household socioeconomic status (SES) and participation in urban and periurban agriculture (UPA) in three West African cities. We used a structured questionnaire to survey 700 randomly selected households: 250 in Kano, Nigeria, 250 in Bobo Dioulasso, Burkina Faso, and 200 in Sikasso, Mali. Multiple correspondence analysis was applied on household asset variables to create an index of assets which was used as a proxy for household SES. The results showed no significant differences in households' rate of participation in UPA across socioeconomic groups. Participation in UPA was rather significantly (P < 0.001) and positively related to household size. Interestingly, the analysis revealed that field crop cultivation and gardening were more common among households in the low and medium SES groups while those in the high SES group were more likely to keep livestock.

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