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1.
J Environ Sci (China) ; 63: 133-139, 2018 Jan.
Artigo em Inglês | MEDLINE | ID: mdl-29406097

RESUMO

Halobenzoquinones (HBQs) are an emerging class of halogenated disinfection byproducts (DBPs) in drinking water, which raised public concerns due to potential carcinogenic effects to human bladder. Our previous work demonstrated that HBQs and hydrogen peroxide (H2O2) together generated oxidative DNA damage via a metal-independent and intercalation-enhanced oxidation mechanism in vitro. This study further investigated the efficiency of various HBQs to induce oxidative DNA damage in T24 bladder cancer cells. Compared with T24 cells without treatment (3.1 lesions per 106 dG), the level of 8-oxo-7,8-dihydro-2'-deoxyguanosine (8-oxodG) significantly increased by 1.4, 3.2, 8.8, and 9.2 times after treatment with tetrabromo-1,4-benzoquinone (TBBQ), terachloro-1,4-benzoquinone (TCBQ), 2,6-dichloro-1,4-benzoquinone (2,6-DCBQ) and 2,5-dichloro-1,4-benzoquinone (2,5-DCBQ) for 24hr, respectively. Interestingly, we found that the oxidative potency of HBQs in T24 cells (2,5-DCBQ≈2,6-DCBQ>TCBQ>TBBQ) is inconsistent with that of in vitro dsDNA oxidation (TCBQ>TBBQ>2,5-DCBQ>2,6-DCBQ), suggesting HBQs induce oxidative lesions in cellular genomic DNA probably involved with a complex mechanism.


Assuntos
Benzoquinonas/toxicidade , Desoxiguanosina/análogos & derivados , Substâncias Perigosas/toxicidade , 8-Hidroxi-2'-Desoxiguanosina , Linhagem Celular Tumoral , Desoxiguanosina/metabolismo , Humanos , Peróxido de Hidrogênio , Neoplasias da Bexiga Urinária
2.
Anal Chem ; 88(15): 7730-7, 2016 08 02.
Artigo em Inglês | MEDLINE | ID: mdl-27416319

RESUMO

Structure-based DNA modification analysis provides accurate and important information on genomic DNA changes from epigenetic modifications to various DNA lesions. However, genomic DNA strands are often required to be efficiently digested into single nucleosides. It is an arduous task because of the involvement of multiple enzymes with different catalytic acitivities. Here we constructed a three-enzyme cascade capillary monolithic bioreactor that consists of immobilized deoxyribonuclease I (DNase I), snake venom phosphodiesterase (SVP), and alkaline phosphatase (ALPase). By the use of this cascade capillary bioreactor, genomic DNA can be efficiently digested into single nucleosides with an increasing rate of ∼20 folds. The improvement is mainly attributed to dramatically increase enzymatic capacity and activity. With a designed macro-porous structure, genomic DNA of 5-30 Kb (∼1.6-10 million Daltons) can be directly passed through the bioreactor simply by hand pushing or a low-pressure microinjection pump. By coupling with liquid chromatography-tandem mass spectrometry (LC-MS/MS), we further developed a sensitive assay for detection of an oxidative stress biomarker 8-oxo-7,8-dihydro-2'-deoxyguanosine (8-oxodG) in DNA. The proposed three-enzyme cascade bioreactor is also potentially applicable for fast identification and quantitative detection of other lesions and modifications in genomic DNA.


Assuntos
Fosfatase Alcalina/metabolismo , DNA/metabolismo , Desoxirribonuclease I/metabolismo , Fosfodiesterase I/metabolismo , 8-Hidroxi-2'-Desoxiguanosina , Fosfatase Alcalina/química , Animais , Bovinos , Cromatografia Líquida de Alta Pressão , Desoxiguanosina/análogos & derivados , Desoxiguanosina/análise , Desoxirribonuclease I/química , Enzimas Imobilizadas/química , Enzimas Imobilizadas/metabolismo , Peróxido de Hidrogênio/química , Ferro/química , Limite de Detecção , Microscopia Eletrônica de Varredura , Fosfodiesterase I/química , Porosidade , Dióxido de Silício/química , Espectrometria de Massas por Ionização e Dessorção a Laser Assistida por Matriz
3.
Environ Sci Technol ; 48(23): 13978-84, 2014 Dec 02.
Artigo em Inglês | MEDLINE | ID: mdl-25383629

RESUMO

17α-Ethinylestradiol (EE2) is the representative of environmental estrogens. Although EE2 can interact with some engineered nanoparticles (NPs), little is known about the bioactivity of NP-associated EE2 in organisms. In this study, we investigated the combined effects of the co-exposed carboxyl-functionalized single-walled carbon nanotubes (cf-SWCNTs) and EE2 in the human breast adenocarcinoma cell line (MCF-7 cells), focusing on the cytotoxicity and bioactivity. There were no significant differences in mitochondrial activity, membrane damage, and cell apoptosis when exposed to cf-SWCNTs with and without adsorbed EE2. However, the bioactivity of adsorbed EE2 on cf-SWCNTs was significantly inhibited. The calculated effective concentration of EE2 in cultured cells showed that less than 0.2% of the total adsorbed EE2 was released, indicating that most EE2 was retained on the cf-SWCNTs during cellular exposure. Furthermore, there were no obvious changes in the bioactivity of adsorbed EE2 in the culture medium containing 5-20% fetal bovine serum (FBS), even up to 10 days of incubation, indicating that the adsorbed EE2 on cf-SWCNTs is highly stable in the cell culture medium. These results mark a promising possibility for EE2 to be adsorbed by cf-SWCNTs in environmentally relevant settings and thereby influenced its toxicity and biological fate. This is also tempting for future studies involving risk assessment ways for association between NPs and contaminants in the environment.


Assuntos
Poluentes Ambientais/toxicidade , Etinilestradiol/toxicidade , Nanotubos de Carbono/toxicidade , Adsorção , Etinilestradiol/química , Genes Reporter , Humanos , Luciferases/metabolismo , Células MCF-7 , Nanotubos de Carbono/química
4.
J Chromatogr A ; 1714: 464578, 2024 Jan 11.
Artigo em Inglês | MEDLINE | ID: mdl-38104506

RESUMO

Alectinib is known as an effective targeted drug, which has excellent therapeutic effect on non-small cell lung cancer and can significantly prolong the survival of patients. Therapeutic drug monitoring is necessary due to the photo-instability of alectinib and the individual differences in patients. In this work, a porous polydopamine graphene oxide composite (PDAG) was prepared by a simple surface modification method. A PDAG-based pipette-tip solid-phase extraction (PT-SPE) coupled with HPLC-UV detection was proposed for the separation and detection of alectinib and its active metabolite M4 in plasma. The method was methodologically validated and showed good linearity in the range of 50-5000 ng mL-1 (R2 > 0.9995). The limit of detection (LOD) was 4.8 ng mL-1 and 3.9 ng mL-1 for alectinib and M4, respectively, and the limit of quantitation (LOQ) was 16.1 ng mL-1 and 13.1 ng mL-1, respectively. The intra-day and inter-day precision expressed by coefficient of variation was less than 4.8 %. The recovery of this method ranged from 84.9 % to 103.5 % with a standard deviation of less than 4.3 %. In conclusion, the established method is accurate, stable and inexpensive, and can be used to monitor the levels of alectinib and M4 in plasma, which provide technical and data support for exploring optimal individualized remedial dosing regimens.


Assuntos
Carcinoma Pulmonar de Células não Pequenas , Neoplasias Pulmonares , Humanos , Cromatografia Líquida de Alta Pressão/métodos , Porosidade , Carcinoma Pulmonar de Células não Pequenas/tratamento farmacológico , Extração em Fase Sólida/métodos
5.
J Chromatogr A ; 1715: 464599, 2024 Jan 25.
Artigo em Inglês | MEDLINE | ID: mdl-38150874

RESUMO

Overweight and obesity are the causes of many diseases and have become global "epidemics". Research on natural active components with anti-adipogenesis effects in plants has aroused the interest of researchers. One of the most critical problems is establishing sample preparation and analytical techniques for quickly and selectively extracting and determining the active anti-adipogenesis components in complex plant matrices for developing new anti-adipogenic drugs. In this study, a new poly(deep eutectic solvents) surface imprinted graphene oxide composite (PDESs-MIP/GO) with high selectivity for phenolic acids was prepared using deep eutectic solvents as monomers and crosslinkers. A miniaturized centrifugation-accelerated pipette-tip matrix solid-phase dispersion method (CPT-MSPD) with PDESs-MIP/GO as adsorbent, coupled with high-performance liquid chromatography, was further developed for the rapid determination of anti-adipogenesis markers in Solidago decurrens Lour. (SDL). The established method was successfully used to determination anti-adipogenesis markers in SDL from different regions, with the advantages of accuracy (recoveries: 94.4 - 115.9 %, RSDs ≤ 9.8 %), speed (CPT-MSPD time: 11 min), selectivity (imprinting factor: ∼2.0), and economy (2 mg of adsorbent and 1 mL of solvents), which is in line with the current advanced principle of "3S+2A" in analytical chemistry.


Assuntos
Solventes Eutéticos Profundos , Grafite , Solidago , Extração em Fase Sólida/métodos , Solventes/química , Cromatografia Líquida de Alta Pressão
6.
Analyst ; 138(17): 4958-66, 2013 Sep 07.
Artigo em Inglês | MEDLINE | ID: mdl-23817464

RESUMO

Exogenous and endogenous genotoxic carcinogens and their in vivo metabolites may result in DNA damage and cause adverse health effects. It is very difficult to specifically detect trace DNA damage in the presence of a large excess of unmodified nucleosides. Here we report a molecularly imprinted polymer (MIP) nanocomposite, namely nanoMIP, which can be used as a "plastic antibody" for specific recognition of benzo[a]pyrene diol epoxide (BPDE)-DNA adduct. Enhanced binding affinity (880 nM) of nanoMIPs was achieved by using two tailor-made functional monomers. The property of binding kinetics was greatly improved in virtue of the well-defined nanostructure, which was fabricated by initiators for continuous activator regeneration-atom transfer radical polymerization (ICAR-ATRP). The BPDE-adducted DNA can be specifically captured by synthetic nanoMIP. By taking advantage of this antibody-mimicking behavior, we further developed a fluorescently imaged particle counting immunoassay (FIPCIA) method for ultrasensitive detection of BPDE-ssDNA adducts using a laser scanning confocal microscope (LSCM). The number of countable fluorescent dots is proportional to the content of BPDE-ssDNA adducts in the DNA sample. The proposed plastic antibody-based FIPCIA method can detect traces of BPDE-DNA adducts as low as 18 pM in human lung carcinoma A549 cells. This highly-sensitive detection of DNA lesions offers a promising alternative to immunogenic antibody-based immunoassays for genomics and DNA modification analysis.


Assuntos
7,8-Di-Hidro-7,8-Di-Hidroxibenzo(a)pireno 9,10-óxido/análogos & derivados , Materiais Biomiméticos/química , Adutos de DNA/metabolismo , Dano ao DNA , DNA de Cadeia Simples/genética , Desoxiguanosina/análogos & derivados , Genoma Humano/genética , Microscopia de Fluorescência , 7,8-Di-Hidro-7,8-Di-Hidroxibenzo(a)pireno 9,10-óxido/metabolismo , Anticorpos/metabolismo , Sequência de Bases , Linhagem Celular Tumoral , DNA de Cadeia Simples/química , DNA de Cadeia Simples/metabolismo , Desoxiguanosina/metabolismo , Humanos , Microscopia Confocal , Impressão Molecular , Nanocompostos/química
7.
Environ Sci Technol ; 47(6): 2886-91, 2013 Mar 19.
Artigo em Inglês | MEDLINE | ID: mdl-23425130

RESUMO

Polyvinyl pyrrolidone polymer (PVP) has been widely applied in biological and medical fields. A few in vitro studies indicated that PVP might cause toxicity. However, the underlying mechanism is poorly understood. In this work, we found that PVP directly induced strand breakages of various DNA molecules, implicating a cleavage activity. Moreover, reactive oxygen species (ROS) scavenging analysis shows that DNA cleavage activity of PVP is not related to ROS-induced oxidation. As revealed by gel electrophoresis and liquid chromatography/mass spectrometry analysis, the major cleavage products of DNA were identified as two purine bases, guanine and adenine, suggesting that PVPs have a novel depurination activity. The selective depurination and DNA cleavage activity of PVPs were further confirmed by studying the interaction of PVP with four nucleosides and four well-designed oligodeoxynucleotides probes containing specific nucleotides. This study may provide insights into PVP-DNA interactions and resultant genotoxicity and may also open a new way for DNA study.


Assuntos
Clivagem do DNA/efeitos dos fármacos , DNA/química , Mutagênicos/toxicidade , Povidona/toxicidade , Purinas/química , Espécies Reativas de Oxigênio/metabolismo , Sequência de Bases , DNA/genética , Modelos Moleculares
8.
Anal Chem ; 84(2): 1157-64, 2012 Jan 17.
Artigo em Inglês | MEDLINE | ID: mdl-22208283

RESUMO

A capillary monolithic bioreactor of snake venom phosphodiesterase (SVP) was constructed to generate different single-nucleotide mass ladders of oligodeoxynucleotides for mass spectrometry (MS)-based sequencing by immobilization. The immobilization of SVP in the porous silica monolith significantly enhances its stability for prolonged and repeated applications. The constructed capillary bioreactor has the advantages of handling (sub)microliter DNA samples and having good permeability. Benefiting from its good permeability, DNA solutions can be directly injected into the sequential digestion bioreactor simply by hand pushing or a low-pressure microinjection pump. Moreover, the immobilization of SVP facilitates the elimination or repression of the metal adducts of oligodeoxynucleotides, improving the analytical performance of MS sequencing. By the application of capillary bioreactor of immobilized SVP, the sequence-specific modification of single-stranded oligodeoxynucleotide induced by a ubiquitous pollutant acrolein (Acr) was identified, demonstrating its promising applications in identification of sequence-specific damage, which may further our understanding of DNA damage caused mutagenesis.


Assuntos
Reatores Biológicos , Eletroforese Capilar , Enzimas Imobilizadas/química , Oligonucleotídeos/química , Fosfodiesterase I/química , Análise de Sequência de DNA/métodos , Espectrometria de Massas por Ionização e Dessorção a Laser Assistida por Matriz/métodos , Venenos de Serpentes/enzimologia
9.
Environ Sci Technol ; 46(6): 3457-64, 2012 Mar 20.
Artigo em Inglês | MEDLINE | ID: mdl-22352688

RESUMO

The toxicity of NPs is not well characterized in terms of their size. In particular, the size-based toxicity of fullerene (C(60)) remains an issue because of a lack of C(60) NPs with a well-controlled size. In this work, six fractions of the nano-C(60) aggregates (nC(60)) with different size distribution were prepared by a simple differential centrifugation. By using these nC(60) fractions, we demonstrate the size-dependent inhibition of DNA polymerase and reduced-size enhanced cytotoxicity. Above all, we found that nC(60) NPs with smaller size may have higher toxicity potency. These size-dependent effects were observed at the high exposure doses (4-6 mg/L). Interestingly, at 20-times lower and noncytotoxic doses, the size-dependent effect can be indicated by apoptosis-related fluorescent protein fused Bax translocation. Considering the toxicity of NPs is often ignored in the traditional end-point analysis for cytotoxicity when the exposure dose is low, the findings presented here will assist in the evaluation of the size-dependent cytotoxicity and dose-response relationships of toxicity mediated by nC(60) NPs at low doses.


Assuntos
Apoptose/efeitos dos fármacos , Fulerenos/toxicidade , Proteína X Associada a bcl-2/metabolismo , Linhagem Celular Tumoral , Fulerenos/química , Humanos , Microscopia Eletrônica de Transmissão , Mitocôndrias/efeitos dos fármacos , Mitocôndrias/metabolismo , Tamanho da Partícula , Espectrofotometria Ultravioleta
10.
J Chromatogr A ; 1676: 463279, 2022 Aug 02.
Artigo em Inglês | MEDLINE | ID: mdl-35802963

RESUMO

Long-term exposure to halobenzoquinones (HBQs) can induce genomic damages and abnormal epigenetic modifications. High-performance liquid chromatography tandem mass spectrometry (HPLC-MS/MS) has shown unique advantages in identification and sensitive analysis of these structurally modified DNA lesions. Prior to MS analysis, genomic DNA needs to be fully digested into mono-nucleosides. Here, we prepared Supernuclease (SN)-, snake venom phosphodiesterase (SVP)- and calf intestinal alkaline phosphatase (CIP)- individually immobilized magnetic nanoparticles (MNPs), and combined them according to certain formula to construct a recyclable SN-SVP-CIP magnetic nanoparticles (SNSC-MNPs) cascade for rapid and efficient DNA digestion. The SNSC-MNPs cascade can fully digest genomic DNA into mono-nucleosides within 30 min. The SNSC-MNPs cascade coupled with HPLC-MS/MS method can accurately and sensitively detect 5-hydroxymethylcytosine (5hmC) changes in genome of human bladder cancer T24 cells induced by tetrachlorobenzoquinone. The immobilization of enzymes on MNPs can enhance the stability and enzymatic activity of the three enzymes, which guarantees the reusability and longtime preservation of the cascades. The relative digestive efficiencies are among 86% -106% up to ten times of reuse. The newly synthesized SNSC-MNPs cascade coupled with HPLC-MS/MS method is promising for fast identification and analysis of structural modifications in genomic DNA.


Assuntos
5-Metilcitosina , Neoplasias da Bexiga Urinária , 5-Metilcitosina/análogos & derivados , 5-Metilcitosina/análise , Benzoquinonas , Cromatografia Líquida de Alta Pressão , DNA/análise , Humanos , Hidrocarbonetos Clorados , Fenômenos Magnéticos , Nucleosídeos , Espectrometria de Massas em Tandem , Neoplasias da Bexiga Urinária/diagnóstico
11.
Int J Mol Sci ; 12(8): 4964-74, 2011.
Artigo em Inglês | MEDLINE | ID: mdl-21954338

RESUMO

An important property of C(60) in aquatic ecotoxicology is that it can form stable aggregates with nanoscale dimensions, namely nC(60). Aggregation allows fullerenes to remain suspended for a long time, and the reactivity of individual C(60) is substantially altered in this aggregate form. Herein, we investigated the interaction of nC(60) and human serum album (HSA) using the methods of fluorescence, fluorescence dynamics, circular dichroism (CD), and site marker competitive experiments. We proposed a binding model consistent with the available experimental results for the interactions of nC(60) with HSA. During the interaction process, the structure and conformation of HSA were affected, leading to functional changes of drug binding sites of HSA.


Assuntos
Fulerenos/química , Modelos Moleculares , Albumina Sérica/química , Dicroísmo Circular , Humanos , Conformação Proteica , Soluções , Espectrometria de Fluorescência
12.
Anal Chem ; 82(23): 9901-8, 2010 Dec 01.
Artigo em Inglês | MEDLINE | ID: mdl-21062024

RESUMO

Modifications of genomic DNA may change gene expression and cause adverse health effects. Here we for the first time demonstrate a particle counting immunoassay for rapid and sensitive detection of DNA modifications using benzo[a]pyrenediol epoxide (BPDE)-DNA adducts as an example. The BPDE-adducted DNA is specifically captured by immunomagnetic particles and then isolated from unmodified DNA by applying an external magnetic field. By taking advantage of the fluorescence signal amplification through multiple labeling of captured DNA by OliGreen dye, the captured BPDE-DNA adducts can be quantified by particle counting from fluorescence imaging. This clearly demonstrates that the number of fluorescently countable particles is proportional to the modification content in genomic DNA. It is interesting to note that the background fluorescence signal caused by nonspecific adsorption of OliGreen dye can be more effectively quenched than that induced by the binding of OliGreen dye to ssDNA, allowing for significant reduction in the background fluorescence and further enhancing the detection sensitivity. The developed method can detect trace BPDE-DNA adducts as low as 180 fM in the presence of 1 billion times more normal nucleotides in genomic DNA and has a dynamic range over 4 orders of magnitude. By using anti-5-methylcytosine antibody, the method is extended to the detection of global DNA methylation. With high sensitivity and specificity, this rapid and easy-to-perform analytical method for DNA modifications shows a broad spectrum of potential applications in genotoxical and epigenetic analysis.


Assuntos
7,8-Di-Hidro-7,8-Di-Hidroxibenzo(a)pireno 9,10-óxido/química , Adutos de DNA/química , DNA/química , Imunoensaio/métodos , 5-Metilcitosina/imunologia , 7,8-Di-Hidro-7,8-Di-Hidroxibenzo(a)pireno 9,10-óxido/isolamento & purificação , Anticorpos/imunologia , Linhagem Celular Tumoral , Adutos de DNA/isolamento & purificação , Metilação de DNA , Imunofluorescência/métodos , Humanos , Separação Imunomagnética
13.
Chem Commun (Camb) ; 56(91): 14171-14174, 2020 Nov 25.
Artigo em Inglês | MEDLINE | ID: mdl-33156312

RESUMO

Monitoring of over-expressed nucleolin in the cytoplasm facilitates early cancer diagnosis. Herein, we present a novel biosensing nanoscaffold based on anti-nucleolin aptamers and polymer-grafted graphene oxides for the fluorescent imaging of nucleolin in the cell cytoplasm, which can distinguish cancer cells from normal cells.


Assuntos
Aptâmeros de Nucleotídeos/química , Citoplasma/química , Engenharia Genética , Imagem Óptica , Fosfoproteínas/análise , Fosfoproteínas/genética , Proteínas de Ligação a RNA/análise , Proteínas de Ligação a RNA/genética , Linhagem Celular , Humanos , Nucleolina
14.
Food Chem ; 313: 126155, 2020 May 30.
Artigo em Inglês | MEDLINE | ID: mdl-31945701

RESUMO

The illegal use of ß-agonists often endangers animal-derived food safety. In this study, a selective detection method for ß-agonists in swine urine was established via the combination of polymeric ionic liquid-molecularly imprinted graphene oxide-miniaturized pipette tip solid-phase extraction and high-performance liquid chromatography. It is worth noting that this method relied mainly on the designed adsorbent, which presented a rich adsorption mechanism, fast mass transfer rate, and high selectivity, and was successfully utilized in the selective extraction of ß-agonists from swine urine samples. The proposed method has low LOD (0.20-0.56 ng/mL), high recovery (94.9-107.9%), and high reusability (4 times, 91.9-108.8%), which indicates its high potential as a selective, sensitive, accurate, and nonfatal method for monitoring the illegal use of ß-agonists in the livestock breeding stage.


Assuntos
Agonistas Adrenérgicos beta/urina , Extração em Fase Sólida/métodos , Drogas Veterinárias/urina , Adsorção , Animais , Líquidos Corporais/química , Cruzamento , Cromatografia Líquida de Alta Pressão/métodos , Clembuterol/urina , Controle de Medicamentos e Entorpecentes , Grafite/química , Análise de Perigos e Pontos Críticos de Controle , Isoproterenol/análogos & derivados , Isoproterenol/urina , Impressão Molecular , Nanoestruturas/química , Extração em Fase Sólida/instrumentação , Suínos
15.
Sci Total Environ ; 700: 134391, 2020 Jan 15.
Artigo em Inglês | MEDLINE | ID: mdl-31627044

RESUMO

In this study, bioaccumulation and transfer characteristics of dechlorane plus (DP) were examined between human adipose tissue and matched maternal serum, and the possible transfer mechanism between tissues was further discussed. The median level of total DP was 971 pg g-1 wet weight (ww) and 1.22 ng g-1 lipid weight (lw) in adipose tissue, respectively, and was 34.7 pg g-1 ww and 3.98 ng g-1 lw for serum, respectively. DP wet levels' positive association with fat contents of five types of human tissues indicated that DP distribution might be related to lipid-driven mechanism. However, the lipid-adjusted adipose-serum partitioning ratios were estimated to be 0.35 for syn-DP and 0.35 for anti-DP, accordingly, which implied that the DP distribution between serum and adipose tissues, was not only regulated by the tissue lipid contents. Both the internal mono-dechlorination of anti-DP, and stereo-selective behavior of DP isomers were not found in DP transfer from blood to adipose tissue. The marginal positive relationship was observed between serum levels and apolipoprotein A concentrations (p = 0.095 for total DP and 0.045 for syn-DP), and neither association was found between serum levels and thyroid hormone concentrations (THs). To our best knowledge, this is the first report about the accumulation relationship of DP between human adipose tissue and blood stream with the corresponding distribution-related mechanism.


Assuntos
Tecido Adiposo/metabolismo , Poluentes Ambientais/metabolismo , Hidrocarbonetos Clorados/metabolismo , Compostos Policíclicos/metabolismo , Monitoramento Ambiental , Humanos
16.
Electrophoresis ; 30(8): 1362-71, 2009 Apr.
Artigo em Inglês | MEDLINE | ID: mdl-19382134

RESUMO

Here we present a unique fabrication of capillary coatings by using a native protein-phospholipid assembly, human low-density lipoprotein (LDL). By taking advantage of its constituents of apoproteins and phospholipids, two types of LDL coatings (non-covalent and covalent) were constructed. The non-covalent LDL coatings were prepared through physical adsorption of its phospholipids on fused silica, and the covalent coatings were prepared through covalent bonding of its apoproteins with the aminopropyl-modified silica. These coatings were subjected to CE separation of basic proteins (lysozyme, cytochrome c, ribonuclease A, and alpha-chymotrypsinogen A). Although both types of the coatings display efficient separation of the four proteins while effectively inhibiting the undesirable adsorption, the covalent LDL coatings provide higher separation efficiency (0.67-2.01 x 10(5) theoretical plates/m) and longer coating-life. Results also reveal that the LDL coatings can hydrophobically interact with proteins and provide options for tuning the separation selectivity of proteins besides their inherent electrophoretic mobility. By using SYPRO Orange staining and fluorescence imaging, the coverage and homogeneity of the LDL coatings along the capillary were further visually characterized. It was found that the coverage of LDL particles in the covalent coatings was much higher than that in the non-covalent coatings. To the best of our knowledge, this is the first report describing the enhanced CE protein separation by lipoprotein coating. In virtue of the apoproteins-phospholipids structure, the LDL coatings are potentially useful in various LDL-related binding studies and complex bio-analysis.


Assuntos
Eletroforese Capilar/instrumentação , Lipoproteínas LDL/química , Proteínas/isolamento & purificação , Cátions Bivalentes/química , Cobre/química , Eletro-Osmose , Humanos , Interações Hidrofóbicas e Hidrofílicas , Magnésio/química , Metanol/química , Estabilidade Proteica , Reprodutibilidade dos Testes
17.
J Chromatogr A ; 1216(5): 873-8, 2009 Jan 30.
Artigo em Inglês | MEDLINE | ID: mdl-19095238

RESUMO

The detection and quantification of disease-related proteins play critical roles in clinical practice and diagnostic assays. We present an affinity probe capillary electrophoresis/laser-induced fluorescence polarization (APCE/LIFP) assay for detection of human thrombin using a specific aptamer as probe. In the APCE/LIFP assay, the mobility and fluorescence polarization of complex are measured simultaneously during CE analysis. The affinity complex of human thrombin can be well separated from unbound aptamer on CE and clearly identified on the basis of its fluorescence polarization and migration. Because of the binding favorable G-quartet conformation potentially involved in the specific aptamer, it was assumed that monovalent and bivalent cations promoting the formation of a stable G quadruplex conformation in the aptamer may enhance the binding of the aptamer and thrombin. Therefore, we investigated the effects of various metal cations on the binding of human thrombin and the aptamer. Our results show that cations like K(+) and Mg(2+) could not stabilize the affinity complex. Without the use of typical cations, a highly sensitive assay of human thrombin was developed with the corresponding detection limits of 4.38x10(-19) and 2.94x10(-19)mol in mass for standard solution and human serum, respectively.


Assuntos
Aptâmeros de Nucleotídeos , Eletroforese Capilar/métodos , Trombina/análise , Cátions/química , Fluorescência , Humanos , Cinética , Lasers , Cloreto de Magnésio/química , Cloreto de Potássio/química , Sensibilidade e Especificidade
18.
J Environ Sci (China) ; 21(12): 1769-76, 2009.
Artigo em Inglês | MEDLINE | ID: mdl-20131611

RESUMO

Aristolochic acid (AA) is a known nephrotoxin and potential carcinogen, which can form covalent DNA adducts after metabolic activation in vivo and in vitro. A simple method for preparation and characterization of aristolochic acid-DNA adducts was developed. Four AA-adducts were synthesized by a direct reaction of AAI/AAII with 2'-deoxynucleosides. The reaction mixture was first cleaned-up and pre-concentrated using solid phase extraction (SPE), and further purified by a reversed-phase high performance liquid chromatography (HPLC). By the application of developed SPE procedure, matrices and byproducts in reaction mixture could be greatly reduced and adducts of high purity (more than 94% as indicated by HPLC) were obtained. The purified AA-DNA adducts were identified and characterized with liquid-electrospray ionization-quadrupole-time of flight-mass spectrometry (LC-ESI-Q-TOF-MS/MS) and LC-Diode array detector-fluorescence (LC-DAD-FL) analysis. This work provides a robust tool for possible large-scale preparation of AA-DNA adduct standards, which can promote the further studies on carcinogenic and mutagenic mechanism of aristolochic acids.


Assuntos
Ácidos Aristolóquicos/química , Adutos de DNA/síntese química , Cromatografia Líquida de Alta Pressão , Adutos de DNA/isolamento & purificação , Extração em Fase Sólida , Espectrometria de Massas por Ionização por Electrospray
19.
Electrophoresis ; 29(22): 4454-62, 2008 Nov.
Artigo em Inglês | MEDLINE | ID: mdl-19035400

RESUMO

Multiple labeling of nucleic acids by intercalative dyes is a promising method for ultrasensitive nucleic acid assays. The properties of the fast dissociation and instability of dye-DNA complexes may prevent from their wide applications in CE-LIF nucleic acid analysis. Here, we describe an optimum CE focusing method by using appropriately paired sample and separation buffers, Tris-glycine buffer and Tris-glycine-acetic acid buffer. The developed method was applied in both uncoated and polyacrylamide coated fused-silica capillary-based CE-LIF analysis while the sample and separation buffers were conversely used. The complexes of intercalative dye benzoxazolium-4-pyridinium dimer and dsDNA were greatly focused (separation efficiency: 1.8 million theoretical plates per meter) by transient isotachophoresis mechanism in uncoated capillary, and moderately focused by transient isotachophoresis in combination of field amplified sample stacking and further stabilized by the paired buffer in polyacrylamide coated capillary. Based on the developed focusing strategy, an ultrasensitive DNA assay was developed for quantitation of calf thymus dsDNA (from 0.02 to 2.14 pM). By the use of an excitation laser power as low as 1 mW, the detection limits of calf thymus dsDNA (3.5 kb) are 7.9 fM in concentration and 2.4x10(-22) mol (150 molecules) in mass. We further demonstrate that the non-gel sieving CE-LIF analysis of DNA fragments can be enhanced by the same strategy. Since the presented strategy can be applied to uncoated and coated capillaries and does not require special device, it is also reasonable to extend to the applications in chip-based CE DNA analysis.


Assuntos
Benzoxazóis/química , DNA/análise , Eletroforese Capilar/métodos , Substâncias Intercalantes/química , Resinas Acrílicas/química , Animais , Soluções Tampão , Bovinos , Celulose/análogos & derivados , Celulose/química , DNA/química , Eletroforese Capilar/instrumentação , Fluorescência , Sensibilidade e Especificidade , Timo/química
20.
J Chromatogr A ; 1183(1-2): 119-28, 2008 Mar 07.
Artigo em Inglês | MEDLINE | ID: mdl-18243229

RESUMO

Benzo[a]pyrene, a common environmental pollutant, can be metabolized into reactive anti-benzo[a]pyrene diol epoxide (anti-BPDE), which predominantly binds to deoxyguanine in DNA and forms four stereoisomeric adducts. To characterize the stereochemistry of these adduct isomers, preparation of single adducted deoxyguanosine (dG) is required for efficient enantiomeric analysis. Here, we demonstrate an improved method for preparation, identification, and analysis of four BPDE-adducted dGs, including (+)-trans-, (-)-trans-, (+)-cis-, and (-)-cis-anti-BPDE-N(2)-dG. These stereoisomerically adducted nucleosides were first synthesized by a direct reaction of (+/-)-anti-BPDE with dG, followed by optimized solid-phase extraction (SPE) and HPLC purification. The reaction of (+/-)-anti-BPDE and dG displayed a yield as high as 45%. The developed preparation method does not require any enzymatic digestion. Based on highly efficient separation achieved by optimization of stationary phase and mobile phase, LC-UV-MS/MS and LC-diode array detection (DAD)-fluorescence detection (FL) methods were established for characterization and analysis of the four stereoisomeric anti-BPDE-dGs. The established LC-DAD-FL method may provide characterization and analysis of four stereoisomeric anti-BPDE-dGs and two interfering anti-BPDE tetrols by taking advantage of their distinct fluorescence quenching.


Assuntos
7,8-Di-Hidro-7,8-Di-Hidroxibenzo(a)pireno 9,10-óxido/análogos & derivados , 7,8-Di-Hidro-7,8-Di-Hidroxibenzo(a)pireno 9,10-óxido/análise , Cromatografia Líquida de Alta Pressão/métodos , Adutos de DNA/análise , Desoxiguanosina/análogos & derivados , 7,8-Di-Hidro-7,8-Di-Hidroxibenzo(a)pireno 9,10-óxido/síntese química , Dicroísmo Circular , Adutos de DNA/isolamento & purificação , Desoxiguanosina/análise , Desoxiguanosina/síntese química , Espectrometria de Fluorescência , Estereoisomerismo , Espectrometria de Massas em Tandem/métodos
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