Combined use of sensory methods for the selection of root, tuber and banana varieties acceptable to end-users.

BACKGROUND: The assessment of user acceptability in relation to crop quality traits should be a full part of breeding selection programs. Our methodology is based on a combination of sensory approaches aiming to evaluate the sensory characteristics and user acceptability of root, tuber and banana (RTB) varieties. RESULTS: The four-stepped approach links sensory characteristics to physicochemical properties and end-user acceptance. It starts with the development of key quality traits using qualitative approaches (surveys and ranking) and it applies a range of sensory tests such as Quantitative Descriptive Analysis with a trained panel, Check-All-That-apply, nine-point hedonic scale and Just-About-Right with consumers. Results obtained on the same samples from the consumer acceptance, sensory testing and physicochemical testing are combined to explore correlations and develop acceptability thresholds. CONCLUSION: A combined qualitative and quantitative approach involving different sensory techniques is necessary to capture sensory acceptance of products from new RTB clones. Some sensory traits can be correlated with physicochemical characteristics and could be evaluated using laboratory instruments (e.g. texture). Other traits (e.g. aroma and mealiness) are more difficult to predict, and the use of a sensory panel is still necessary. For these latter traits, more advanced physicochemical methods that could accelerate the breeding selection through high throughput phenotyping are still to be developed. © 2023 The Authors. Journal of The Science of Food and Agriculture published by John Wiley & Sons Ltd on behalf of Society of Chemical Industry.

Optimizing root yield of cassava under fertigation and the masked effect of atmospheric temperature.

BACKGROUND: Fertigation is a rare and an expensive method of fertilizer application to cassava, and hence there is a need to optimize its efficiency for profitability. This study's objective was to optimize root yield of cassava through fertigation using a logistic model. RESULTS: The field treatments were six fertigation concentrations against three cassava varieties, selected according to their maturity period. The logistic model predicted 52%, 116% and 281% benefit of fertigation for the varieties Mweru, Kampolombo and Nalumino, respectively. Furthermore, only half of the amount of fertilizer applied for Mweru was required to achieve twice the root yield of Kampolombo. During the experiment, an unknown importance of atmospheric temperature to cassava and its relationship to fertigation was observed. An elevation of 3.7 °C in atmospheric temperature led to 226%, 364% and 265% increase in root yield of Mweru, Kampolombo and Nalumino, respectively. Conversely, shoot biomass and root yield declined when the average atmospheric temperatures dropped by 3.6 °C. However, the cold temperatures affected the short-growth-duration (Mweru) and medium-growth-duration (Kampolombo) varieties earlier, 22 days after the drop, than the long-growth-duration variety (Nalumino) - 50 days after the drop. CONCLUSION: Fertigation induced resilience of the shoot biomass production to cold which was most pronounced in the root yield of Mweru in response to the highest fertigation concentration. Thus, while fertigation improved cassava's resilience to cold, it only did so effectively for short-growth-duration variety, Mweru. Also, enhanced performance of cassava under increased atmospheric temperature indicated its importance as a climate-smart crop. © 2020 Society of Chemical Industry.

Conservation of polypyrimidine tract binding proteins and their putative target RNAs in several storage root crops.

BACKGROUND: Polypyrimidine-tract binding proteins (PTBs) are ubiquitous RNA-binding proteins in plants and animals that play diverse role in RNA metabolic processes. PTB proteins bind to target RNAs through motifs rich in cytosine/uracil residues to fine-tune transcript metabolism. Among tuber and root crops, potato has been widely studied to understand the mobile signals that activate tuber development. Potato PTBs, designated as StPTB1 and StPTB6, function in a long-distance transport system by binding to specific mRNAs (StBEL5 and POTH1) to stabilize them and facilitate their movement from leaf to stolon, the site of tuber induction, where they activate tuber and root growth. Storage tubers and root crops are important sustenance food crops grown throughout the world. Despite the availability of genome sequence for sweet potato, cassava, carrot and sugar beet, the molecular mechanism of root-derived storage organ development remains completely unexplored. Considering the pivotal role of PTBs and their target RNAs in potato storage organ development, we propose that a similar mechanism may be prevalent in storage root crops as well. RESULTS: Through a bioinformatics survey utilizing available genome databases, we identify the orthologues of potato PTB proteins and two phloem-mobile RNAs, StBEL5 and POTH1, in five storage root crops - sweet potato, cassava, carrot, radish and sugar beet. Like potato, PTB1/6 type proteins from these storage root crops contain four conserved RNA Recognition Motifs (characteristic of RNA-binding PTBs) in their protein sequences. Further, 3´ UTR (untranslated region) analysis of BEL5 and POTH1 orthologues revealed the presence of several cytosine/uracil motifs, similar to those present in potato StBEL5 and POTH1 RNAs. Using RT-qPCR assays, we verified the presence of these related transcripts in leaf and root tissues of these five storage root crops. Similar to potato, BEL5-, PTB1/6- and POTH1-like orthologue RNAs from the aforementioned storage root crops exhibited differential accumulation patterns in leaf and storage root tissues. CONCLUSIONS: Our results suggest that the PTB1/6-like orthologues and their putative targets, BEL5- and POTH1-like mRNAs, from storage root crops could interact physically, similar to that in potato, and potentially, could function as key molecular signals controlling storage organ development in root crops.

A Risk Assessment Framework for Seed Degeneration: Informing an Integrated Seed Health Strategy for Vegetatively Propagated Crops.

Pathogen buildup in vegetative planting material, termed seed degeneration, is a major problem in many low-income countries. When smallholder farmers use seed produced on-farm or acquired outside certified programs, it is often infected. We introduce a risk assessment framework for seed degeneration, evaluating the relative performance of individual and combined components of an integrated seed health strategy. The frequency distribution of management performance outcomes was evaluated for models incorporating biological and environmental heterogeneity, with the following results. (1) On-farm seed selection can perform as well as certified seed, if the rate of success in selecting healthy plants for seed production is high; (2) when choosing among within-season management strategies, external inoculum can determine the relative usefulness of 'incidence-altering management' (affecting the proportion of diseased plants/seeds) and 'rate-altering management' (affecting the rate of disease transmission in the field); (3) under severe disease scenarios, where it is difficult to implement management components at high levels of effectiveness, combining management components can be synergistic and keep seed degeneration below a threshold; (4) combining management components can also close the yield gap between average and worst-case scenarios. We also illustrate the potential for expert elicitation to provide parameter estimates when empirical data are unavailable. [Formula: see text] Copyright © 2017 The Author(s). This is an open access article distributed under the CC BY-NC-ND 4.0 International license .

Forests, fields, and the edge of sustainability at the ancient Maya city of Tikal.

Tikal has long been viewed as one of the leading polities of the ancient Maya realm, yet how the city was able to maintain its substantial population in the midst of a tropical forest environment has been a topic of unresolved debate among researchers for decades. We present ecological, paleoethnobotanical, hydraulic, remote sensing, edaphic, and isotopic evidence that reveals how the Late Classic Maya at Tikal practiced intensive forms of agriculture (including irrigation, terrace construction, arboriculture, household gardens, and short fallow swidden) coupled with carefully controlled agroforestry and a complex system of water retention and redistribution. Empirical evidence is presented to demonstrate that this assiduously managed anthropogenic ecosystem of the Classic period Maya was a landscape optimized in a way that provided sustenance to a relatively large population in a preindustrial, low-density urban community. This landscape productivity optimization, however, came with a heavy cost of reduced environmental resiliency and a complete reliance on consistent annual rainfall. Recent speleothem data collected from regional caves showed that persistent episodes of unusually low rainfall were prevalent in the mid-9th century A.D., a time period that coincides strikingly with the abandonment of Tikal and the erection of its last dated monument in A.D. 869. The intensified resource management strategy used at Tikal-already operating at the landscape's carrying capacity-ceased to provide adequate food, fuel, and drinking water for the Late Classic populace in the face of extended periods of drought. As a result, social disorder and abandonment ensued.

Nutrition profiles of farm households across different farming systems in Ethiopia: Unpacking the determinants and implications for nutrition-sensitive interventions.

Tackling nutrition insecurity remains a critical challenge in developing countries. In the predominantly rain-fed and smallholder-based farming systems of Ethiopia, production diversity and livelihood strategies of the farm households vary across geographic areas. However, the effects of household socioeconomic characteristics, production diversity, and household incomes on nutrition profiles in distinct settings have been inadequately understood. Therefore, this study was undertaken to examine the association of farming system type, sources of income, and household wealth status with household nutrition profiles in three remote locations such as Mennisa, Welmel Tiqa, and Agam Wuha that represent root crops-based farming, maize-based semi-pastoral farming, and teff-based cereal farming systems, respectively. A combination of qualitative and quantitative data collection techniques was employed. A multistage sampling procedure was used to select a total of 265 smallholder households for the structured survey interviews. Standard statistical tests and Tobit regression analyses were performed after determining the wealth category of each household. Results revealed a diversity of income sources used by each of the farm households with average values of 9 in Mennisa, 10 in Agam Wuha, and 11 in Welmel Tiqa, with the contributions of each income source varying by household wealth category and location. As expected, expenditures on food significantly exceeded those on non-food categories for poor households and vice versa for rich wealth households. The average total food variety score (FVS) for Welmel Tiqa was twice that for Agam Wuha, confirming the need for site-specific nutrition profile assessments. Despite the observed differences in household nutrition profiles among wealth categories and locations, the apparent intakes of vitamin A, vitamin B12, vitamin D, and calcium were consistently below the population-level estimated average requirements across all locations. The number of adequately consumed nutrients by farm households was negatively associated with family size, age of household heads, livestock holdings, wealth categories, and irrigation use, and positively associated with crop production diversity, income diversity, and FVS. The negative association between irrigation use and nutrition security was likely due to the focus on producing crops with a high market value on land under irrigation, coupled with ineffective allocation of generated income for enhancing household nutritional outcomes. Therefore, programs that include irrigated agriculture investments should consider adopting a more integrated nutrition-sensitive interventions, including consideration of locally adapted nutritious crops, such as orange-flesh sweet potato, to address critical deficiency of Vitamin A, nutrition training coupled with development of recipes and cooking demonstrations, and marketing and promotion for nutritious crops.

Influence of dicarboxylic acid polymer in enhancing the growth and productivity of sweet potato (Ipomoea batatas L.) in acidic soil.

The available phosphorus (P) in acid sulfate soils (ASSs) is low because of fixation by aluminum (Al) and iron (Fe), resulting in decreased P use efficiency and crop yield. At present, the use of dicarboxylic acid polymer (DCAP) coated on P fertilizer is expected to improve P use efficiency and plant productivity. However, the influence of DCAP on P solubility and on the yield of sweet potato cultivated in acidic soils has not been elucidated. Thus, the aimed of this study was to evaluate the effect of the use of DCAP-coated P fertilizer on the availability and nutrient uptake of P as well as the yield of sweet potato. Under the greenhouse condition, the use of DCAP significantly improved P availability (~3 mg P kg-1), increasing tuber diameter and length by ~0.5 and ~1.0 cm, respectively. Thus, the productivity of sweet potato in the treatment 40-kg P2O5 and 60-kg P2O5 ha-1 coated with DCAP was higher by about 100 g pot-1 than that in the same rate of P fertilizers (40- and 60-kg P2O5 ha-1) not coated with DCAP. In the field experiment, P accumulation (82.7 kg P2O5 ha-1) and tuber yield (22.0 t ha-1) in the treatment of DCAP-coated with 60-kg P2O5 ha-1 were not significantly different compared with that in the treatment of 80-kg P2O5 ha-1 (82.1 kg P2O5 and 21.7 t ha-1, respectively). Furthermore, the use of DCAP combined with 75% P fertilizer increased the P availability by the same amount as that with the use of 100% P fertilizer. Hence, the use of DCAP reduced about 25% of the chemical P fertilizer applied in soil.

Metabolic engineering of cassava to improve carotenoids.

Cassava is a staple food used in many countries around the world, despite deficiencies in micronutrients such as provitamin A carotenoids. Unfortunately, improvement of the cassava nutritional content by use of conventional breeding is slow and difficult. Therefore, there is an urgent need to develop and standardize protocols using biotechnological tools to improve cassava. The Alliance of Biodiversity International and the International Center for Tropical Agriculture (CIAT) have worked on cassava genetic transformation over the last 30 years. Here, we describe, step by step, the procedures used for genetic transformation of cassava variety TMS60444, to improve carotenoids and other traits. This protocol includes stock setup, reagents, media preparation, materials, and equipment, for the genetic transformation of embryogenic tissues. The main expected output in publishing this protocol is to provide the basis for a reproducible and reliable method to genetically modify and/or gene edit Latin American and Asian cassava varieties.

High Nitrogen Availability Limits Photosynthesis and Compromises Carbohydrate Allocation to Storage in Roots of Manihot esculenta Crantz.

Cassava (M. esculenta Crantz), feeding countless people and attracting markets worldwide, is a model for traditional crops that need physiology-based fertigation (fertilization through irrigation) standards in intensive cultivation. Hence, we studied the effects of 10 to 200 mg L-1 nitrogen (N) fertigation on growth and yields of cassava and targeted alterations in their photosynthetic, transpiration, and carbohydrate management. We found that increasing irrigation N from 10 to 70 mg L-1 increased cassava's photosynthesis and transpiration but supported only the canopy's growth. At 100 mg N L-1 cassava reached a threshold of sugar in leaves (∼47 mg g-1), began to accumulate starch and supported higher yields. Yet, at 200 mg N L-1, the canopy became too demanding and plants had to restrain transpiration, reduce photosynthesis, decrease carbohydrates, and finally lower yields. We concluded that the phases of cassava response to nitrogen are: 1) growth that does not support yields at low N, 2) productive N application, and 3) excessive use of N. Yet traditional leaf mineral analyses fail to exhibit these responses, and therefore we propose a simple and inexpensive carbohydrate measurement to guide a precise use of N.

Soil loss due to crop harvesting in the European Union: A first estimation of an underrated geomorphic process.

Over the last two decades or so, there has been many research carried out to understand the mechanics and spatial distribution of soil loss by water erosion and to a lesser extent of wind, piping and tillage erosion. The acquired knowledge helped the development of prediction tools useful to support decision-makers in both ex-ante and ex-post policy evaluation. In Europe, recent studies have modelled water, wind and tillage erosion at continental scale and shed new light on their geography. However, to acquire a comprehensive picture of soil erosion threats more processes need to be addressed and made visible to decision-makers. Since 1986, a small number of studies have pointed to an additional significant soil degradation process occurring when harvesting root and tuber crops. Field observations and measurements have shown that considerable amounts of soil can be removed from the field due to soil sticking to the harvested roots and the export of soil clods during the crop harvest. This study aims to scale up the findings of past studies, carried out at plot, regional, and national level, in order to obtain some preliminary insights into the magnitude of soil loss from cropland due to sugar beets and potatoes harvesting in Europe. We address this issue at European Union (EU) scale taking into account long-term (1975-2016) crop statistics of sugar beet and potato aggregated at regional and country levels. During the period 2000-2016, sugar beets and potatoes covered in average ca. 4.2 million ha (3.81%) of the EU-28 arable land estimated at 110 million ha. The total Soil Loss by Crop Harvesting (SLCH) is estimated at ca. 14.7 million tons yr-1 in the EU-28. We estimate that ca. 65% of the total SLCH is due to harvesting of sugar beets and the rest as a result of potatoes harvesting.

Modification of the existing maximum residue levels for flonicamid in various root crops.

In accordance with Article 6 of Regulation (EC) No 396/2005, the Agriculture and Horticulture Development Council submitted a request to the competent national authority in the United Kingdom to modify the existing maximum residue levels (MRL) for the active substance flonicamid in beetroots, carrots, celeriacs/turnip rooted celeries, horseradishes, Jerusalem artichokes, parsnips, parsley roots/Hamburg roots parsley, radishes, salsifies, swedes/rutabagas, turnips. The data submitted in support of the request were found to be sufficient to derive MRL proposals for the commodities concerned. Adequate analytical methods for enforcement are available to control the residues of flonicamid in the crops under consideration at the validated limit of quantification (LOQ) of 0.01 mg/kg for each analyte of the residue definition and in animal matrices at the validated LOQ of 0.01 mg/kg for each analyte of the residue definition. Based on the risk assessment results, EFSA concluded that the short-term and long-term intake of residues resulting from the use of flonicamid according to the reported agricultural practices is unlikely to present a risk to consumer health.

Effect of citrate ions on the softening of root crops prepared with freeze-thaw impregnation of macerating enzymes.

UNLABELLED: Freeze-thaw impregnation is a technique used for the rapid impregnation of substances into foodstuffs. Freeze-thaw impregnation with macerating enzymes has been applied to soften foodstuffs, while retaining their original shapes and flavors. In this study, we found that co-impregnation with citrate ions and macerating enzymes significantly facilitated the softening of root crops. When burdock roots were processed by the impregnating solution at pH 4.0-5.0, co-impregnated burdock roots exhibited 1/6-1/3 firmness values compared with burdock roots impregnated with only enzymes. The impregnation with citrate ions alone at pH 4.0 to 5.0 did not soften burdock roots. The firmness of burdock roots was positively correlated with the amount of water-insoluble calcium in the samples. The results suggested that the degradation of pectins by pectinolytic activities could promote contact with citrate to bridging-calcium ions interacting with the pectin chains. Therefore, the softening by the synergistic effect of citrate ions and macerating enzymes was related to the amount of pectins contained in root crops. That is, the synergistic effect was significant with burdock roots and carrots (from which 50% of polysaccharides are pectins) unlike with lotus rhizomes and bamboo shoots (from which 30% and 10% of polysaccharides are pectins, respectively). PRACTICAL APPLICATION: Freeze-thaw impregnation with macerating enzymes and citrate ions can be applied for the production of care foods which can be eaten without chewing. The softened products induce the pleasure of eating for consumers because their original shapes and flavors are retained.

Nutrition in times of crisis: A qualitative study in Siargao Island, Philippines, during the COVID-19 pandemic

Objectives@#Despite the public-health significance of both malnutrition and crises, little has been done to explore the convergence of the two domains and develop ways to improve policies and practices, especially in rural communities. This article remedies that knowledge gap by focusing on nutrition-related changes, responses, and practices during crisis situations in Siargao Island, Philippines, using the COVID-19 pandemic as a backdrop.@*Methods@#Forty-six (46) semi-structured interviews were conducted among parents, caregivers, local health workers, and local officials of Del Carmen, Siargao Island. Principles of thematic analysis were applied to data analysis using NVivo 12. Afterwards, the preliminary data were presented in a virtual validation session with the local community and stakeholders.@*Results@#Despite the high prevalence of malnutrition amid a backdrop of economic and nutritional difficulties, the community members generally viewed their children as healthy. Rice remained (disproportionately) central to people’s diets; possible alternatives like root crops were considered emergency foods only and not culturally acceptable as staples, in spite of their cheap and ubiquitous nature. Lastly, the economic and financial repercussions of the COVID-19 pandemic have also negatively affected the community members’ overall nutrition and food sources.@*Conclusion@#More efforts should be directed toward encouraging the consumption of root vegetables and fruits as rice alternatives in everyday diet—a costeffective strategy that would also promote dietary diversification. More importantly, nutrition responses should consider local food systems in terms of specific local economies and geographies, while health promotion efforts should engage with local notions of ‘health’ and ‘nutrition’ and encourage community participation in (re)designing policy interventions.

Variabilidad morfológica y evaluación agronómica de maukas Mirabilis expansa (Ruiz & Pav.) Standl. del norte peruano

Se estudiaron 40 entradas de mauka, chago o miso, Mirabilis expansa (Nyctaginaceae), para determinar la variabilidad morfológica, la distribución geográfica y el comportamiento agronómico del germoplasma, colectado principalmente en el norte peruano (entre los 2300 y 3400 m de altitud) y mantenido en la Universidad Nacional de Cajamarca (7°2945"S, 78°1012"W, altitud 2670 m, 14 °C de temperatura diaria y 670 mm de lluvia anual). Se usaron 17 descriptores cualitativos de alta heredabilidad y se evaluaron siete componentes de rendimiento, durante tres campañas agrícolas. El fenograma generó cinco grupos o morfotipos (coeficiente de disimilitud de 0,0). Los morfotipos I, III y V se concentran en las provincias de Hualgayoc, San Miguel, Chota y Cajamarca. El morfotipo II probablemente es endémico de la Región La Libertad. La única entrada del sur del Perú (Puno), constituyó un morfotipo independiente (IV). Seis entradas: 15, 17, 24, 25, 28 (morfotipo I) y 16 (morfotipo III), alcanzaron los más altos rendimientos (46 - 76 t. ha-1).

Forty accessions of mauka, chago or miso, Mirabilis expansa (Nyctaginaceae) were studied, in order to determine the morphological variability, geographic distribution and agronomic performance of germplasm collected mainly in northern Peru (between 2300 to 3400 m) and maintained at Universidad Nacional de Cajamarca (7°2945"S, 78°1012"W, 2670 m, 14 °C of daily temperature and 670 mm of rain annually). Seventeen qualitative descriptors of high heritability were used and seven yield components for three crop years were also evaluated. The phenogram generated five groups or morphotypes (dissimilarity coefficient of 0.0), which implies 87.5% of duplicates in the collection. The morphotypes I, III and V are concentrated in the provinces of Hualgayoc, San Miguel, Chota and Cajamarca. The morphotype II is probably endemic to the La Libertad region. The only accession from the south of Peru (Puno) was an independent morphotype (IV). Six accessions: 15, 17, 24, 25, 28 (morphotype I) nad 16 (morphotype III) reached the highest yields (46 - 76 t. ha-1).