Bibliometric analysis of worldwide research on Polycythemia Vera in the 21st century.

Polycythemia vera (PV) is a myeloproliferative tumor with low incidence and complex symptoms, affecting patients' quality of life and shortening their life span. Since the beginning of the 21st century, there has been an update but a need for uniform consensus regarding diagnosing and treating PV. With the continued interest of researchers in this field, a bibliometric study of PV is necessary. This paper aims to analyze articles on PV through bibliometric software to provide collaborative information and new ideas for researchers in this field. We collected PV-related publications in the Web of Science Core Collection database from 2000 to 2023. The included literature was analyzed using Citespace (6.2.R2), VOSviewer (1.6.19), and Bibliometrix. The study included country/region, institution, authors, journals, keywords, and references, and a visual knowledge network diagram was constructed. Microsoft Excel 2013 was also used for statistical analysis. A total of 1,093 articles were eventually included. The number of PV-related publications has steadily increased from 2000 to the present, with great potential for future growth. The US and US institutions have contributed more to this field, with the US ranking first in the number of publications, total citations, and centrality. Alessandro M. Vannucchi is the most published author. Tefferi, Ayalew is the most cited author. And BLOOD has the most publications, topping the list of the eleven high-productivity core source journals. The most cited article was "Acquired mutation of the tyrosine kinase JAK2 in human myeloproliferative disorders" (Baxter, EJ, 2005). By examining the keywords, we found that the diagnosis and typing of true erythrocytosis, the use of ruxolitinib, and the tyrosine kinase JAK2 are the research hotspots in the field; genetic and molecular research in the field of true erythrocytosis is a cutting-edge topic in the field; and risk factors for true erythrocytosis is a cutting-edge hotspot issue in the field. The fruitful research in this century has laid the foundation for developing the field of PV. The information in this article will provide researchers with current hotspots and future potential in the discipline, helping the field achieve more extraordinary breakthroughs. Currently, research should focus on increasing global multicenter collaborative research in diagnosis and treatment to develop scientifically recognized diagnostic and treatment protocols and new clinical drug research. Our proposed model of global innovation collaboration will provide strong support for future research.

Machine learning and user interface for cyber risk management of water infrastructure.

With the continuous modernization of water plants, the risk of cyberattacks on them potentially endangers public health and the economic efficiency of water treatment and distribution. This article signifies the importance of developing improved techniques to support cyber risk management for critical water infrastructure, given an evolving threat environment. In particular, we propose a method that uniquely combines machine learning, the theory of belief functions, operational performance metrics, and dynamic visualization to provide the required granularity for attack inference, localization, and impact estimation. We illustrate how the focus on visual domain-aware anomaly exploration leads to performance improvement, more precise anomaly localization, and effective risk prioritization. Proposed elements of the method can be used independently, supporting the exploration of various anomaly detection methods. It thus can facilitate the effective management of operational risk by providing rich context information and bridging the interpretation gap.

Smart Shelf System for Customer Behavior Tracking in Supermarkets.

Transactional data from point-of-sales systems may not consider customer behavior before purchasing decisions are finalized. A smart shelf system would be able to provide additional data for retail analytics. In previous works, the conventional approach has involved customers standing directly in front of products on a shelf. Data from instances where customers deviated from this convention, referred to as "cross-location", were typically omitted. However, recognizing instances of cross-location is crucial when contextualizing multi-person and multi-product tracking for real-world scenarios. The monitoring of product association with customer keypoints through RANSAC modeling and particle filtering (PACK-RMPF) is a system that addresses cross-location, consisting of twelve load cell pairs for product tracking and a single camera for customer tracking. In this study, the time series vision data underwent further processing with R-CNN and StrongSORT. An NTP server enabled the synchronization of timestamps between the weight and vision subsystems. Multiple particle filtering predicted the trajectory of each customer's centroid and wrist keypoints relative to the location of each product. RANSAC modeling was implemented on the particles to associate a customer with each event. Comparing system-generated customer-product interaction history with the shopping lists given to each participant, the system had a general average recall rate of 76.33% and 79% for cross-location instances over five runs.

Integrating statistical and visual analytic methods for bot identification of health-related survey data.

OBJECTIVE: In recent years, we have increasingly observed issues concerning quality of online information due to misinformation and disinformation. Aside from social media, there is growing awareness that questionnaire data collected using online recruitment methods may include suspect data provided by bots. Issues with data quality can be particularly problematic in health and/or biomedical contexts; thus, developing robust methods for suspect data identification and removal is of paramount importance in informatics. In this study, we describe an interactive visual analytics approach to suspect data identification and removal and demonstrate the application of this approach on questionnaire data pertaining to COVID-19 derived from different recruitment venues, including listservs and social media. METHODS: We developed a pipeline for data cleaning, pre-processing, analysis, and automated ranking of data to address data quality issues. We then employed the ranking in conjunction with manual review to identify suspect data and remove them from subsequent analyses. Last, we compared differences in the data before and after removal. RESULTS: We performed data cleaning, pre-processing, and exploratory analysis on a survey dataset (N = 4,163) collected using multiple recruitment mechanins using the Qualtrics survey platform. Based on these results, we identified suspect features and used these to generate a suspect feature indicator for each survey response. We excluded survey responses that did not fit the inclusion criteria for the study (n = 29) and then performed manual review of the remaining responses, triangulating with the suspect feature indicator. Based on this review, we excluded 2,921 responses. Additional responses were excluded based on a spam classification by Qualtrics (n=13), and the percentage of survey completion (n=328), resulting in a final sample size of 872. We performed additional analyses to demonstrate the extent to which the suspect feature indicator was congruent with eventual inclusion, as well as compared the characteristics of the included and excluded data. CONCLUSION: Our main contributions are: 1) a proposed framework for data quality assessment, including suspect data identification and removal; 2) the analysis of potential consequences in terms of representation bias in the dataset; and 3) recommendations for implementation of this approach in practice.

Exploring the potential role of bikeshare to complement public transit: The case of San Francisco amid the coronavirus crisis.

The recent worldwide SARS-CoV-2 (COVID-19) pandemic has reshaped the way people live, how they access goods and services, and how they perform various activities. For public transit, there have been health concerns over the potential spread to transit users and transit service staff, which prompted transportation agencies to make decisions about the service, e.g., whether to reduce or temporarily shut down services. These decisions had substantial negative consequences, especially for transit-dependent travelers, and prompted transit users to explore alternative transportation modes, e.g., bikeshare. However, local governments and the public in general have limited information about whether and to what extent bikeshare provides adequate accessibility and mobility to those transit-dependent residents. To fill this gap, this study implemented spatial and visual analytics to identify how micro-mobility in the form of bikesharing has addressed travel needs and improved the resilience of transportation systems. The study analyzed the case of San Francisco in California, USA, focusing on three phases of the pandemic, i.e., initial confirmed cases, shelter-in-place, and initial changes in transit service. First, the authors implemented unsupervised machine learning clustering methods to identify different bikesharing trip types. Moreover, through spatiotemporally matching bikeshare ridership data with transit service information (i.e., General Transit Feed Specification, GTFS) using the tool called OpenTripPlanner (OTP), the authors studied the travel behavior changes (e.g., the proportion of bikeshare trips that could be finished by transit) for different bikeshare trip types over the three specified phases. This study revealed that during the pandemic, more casual users joined bikeshare programs; the proportion of recreation-related bikeshare trips increased; and routine trips became more prevalent considering that docking-station-based bikeshare trips increased. More importantly, the analyses also provided insights about mode substitution, because the analyses identified an increase in dockless bikeshare trips in areas with no or limited transit coverage.

Visualization for epidemiological modelling: challenges, solutions, reflections and recommendations.

We report on an ongoing collaboration between epidemiological modellers and visualization researchers by documenting and reflecting upon knowledge constructs-a series of ideas, approaches and methods taken from existing visualization research and practice-deployed and developed to support modelling of the COVID-19 pandemic. Structured independent commentary on these efforts is synthesized through iterative reflection to develop: evidence of the effectiveness and value of visualization in this context; open problems upon which the research communities may focus; guidance for future activity of this type and recommendations to safeguard the achievements and promote, advance, secure and prepare for future collaborations of this kind. In describing and comparing a series of related projects that were undertaken in unprecedented conditions, our hope is that this unique report, and its rich interactive supplementary materials, will guide the scientific community in embracing visualization in its observation, analysis and modelling of data as well as in disseminating findings. Equally we hope to encourage the visualization community to engage with impactful science in addressing its emerging data challenges. If we are successful, this showcase of activity may stimulate mutually beneficial engagement between communities with complementary expertise to address problems of significance in epidemiology and beyond. See https://ramp-vis.github.io/RAMPVIS-PhilTransA-Supplement/. This article is part of the theme issue 'Technical challenges of modelling real-life epidemics and examples of overcoming these'.

A flexible framework for visualizing and exploring patient misdiagnosis over time.

Diagnosis is a complex and ambiguous process and yet, it is the critical hinge point for all subsequent clinical reasoning and decision-making. Tracking the quality of the patient diagnostic process has the potential to provide valuable insights in improving the diagnostic accuracy and to reduce downstream errors but needs to be informative, timely, and efficient at scale. However, due to the rate at which healthcare data are captured on a daily basis, manually reviewing the diagnostic history of each patient would be a severely taxing process without efficient data reduction and representation. Application of data visualization and visual analytics to healthcare data is one promising approach for addressing these challenges. This paper presents a novel flexible visualization and analysis framework for exploring the patient diagnostic process over time (i.e., patient diagnosis paths). Our framework allows users to select a specific set of patients, events and/or conditions, filter data based on different attributes, and view further details on the selected patient cohort while providing an interactive view of the resulting patient diagnosis paths. A practical demonstration of our system is presented with a case study exploring infection-based patient diagnosis paths.

Visualization Techniques of Time-Oriented Data for the Comparison of Single Patients With Multiple Patients or Cohorts: Scoping Review.

BACKGROUND: Visual analysis and data delivery in the form of visualizations are of great importance in health care, as such forms of presentation can reduce errors and improve care and can also help provide new insights into long-term disease progression. Information visualization and visual analytics also address the complexity of long-term, time-oriented patient data by reducing inherent complexity and facilitating a focus on underlying and hidden patterns. OBJECTIVE: This review aims to provide an overview of visualization techniques for time-oriented data in health care, supporting the comparison of patients. We systematically collected literature and report on the visualization techniques supporting the comparison of time-based data sets of single patients with those of multiple patients or their cohorts and summarized the use of these techniques. METHODS: This scoping review used the PRISMA-ScR (Preferred Reporting Items for Systematic Reviews and Meta-Analyses extension for Scoping Reviews) checklist. After all collected articles were screened by 16 reviewers according to the criteria, 6 reviewers extracted the set of variables under investigation. The characteristics of these variables were based on existing taxonomies or identified through open coding. RESULTS: Of the 249 screened articles, we identified 22 (8.8%) that fit all criteria and reviewed them in depth. We collected and synthesized findings from these articles for medical aspects such as medical context, medical objective, and medical data type, as well as for the core investigated aspects of visualization techniques, interaction techniques, and supported tasks. The extracted articles were published between 2003 and 2019 and were mostly situated in clinical research. These systems used a wide range of visualization techniques, most frequently showing changes over time. Timelines and temporal line charts occurred 8 times each, followed by histograms with 7 occurrences and scatterplots with 5 occurrences. We report on the findings quantitatively through visual summarization, as well as qualitatively. CONCLUSIONS: The articles under review in general mitigated complexity through visualization and supported diverse medical objectives. We identified 3 distinct patient entities: single patients, multiple patients, and cohorts. Cohorts were typically visualized in condensed form, either through prior data aggregation or through visual summarization, whereas visualization of individual patients often contained finer details. All the systems provided mechanisms for viewing and comparing patient data. However, explicitly comparing a single patient with multiple patients or a cohort was supported only by a few systems. These systems mainly use basic visualization techniques, with some using novel visualizations tailored to a specific task. Overall, we found the visual comparison of measurements between single and multiple patients or cohorts to be underdeveloped, and we argue for further research in a systematic review, as well as the usefulness of a design space.

An Intelligent Traffic Surveillance System Using Integrated Wireless Sensor Network and Improved Phase Timing Optimization.

The transportation industry is crucial to the realization of a smart city. However, the current growth in vehicle numbers is not being matched by an increase in road capacity. Congestion may boost the number of accidents, harm economic growth, and result in higher gas emissions. Currently, traffic congestion is seen as a severe threat to urban life. Suffering as a result of increased car traffic, insufficient infrastructure, and inefficient traffic management has exceeded the tolerance limit. Since route decisions are typically made in a short amount of time, the visualization of the data must be presented in a highly conceivable way. Also, the data generated by the transportation system face difficulties in processing and sometimes lack effective usage in certain fields. Hence, to overcome the challenges in computer vision, a novel computer vision-based traffic management system is proposed by integrating a wireless sensor network (WSN) and visual analytics framework. This research aimed to analyze average message delivery, average latency, average access, average energy consumption, and network performance. Wireless sensors are used in the study to collect road metrics, quantify them, and then rank them for entry. For optimization of the traffic data, improved phase timing optimization (IPTO) was used. The whole experimentation was carried out in a virtual environment. It was observed from the experimental results that the proposed approach outperformed other existing approaches.

Systematic Literature Review on Visual Analytics of Predictive Maintenance in the Manufacturing Industry.

The widespread adoption of cyber-physical systems and other cutting-edge digital technology in manufacturing industry production facilities may motivate stakeholders to embrace the idea of Industry 4.0. Some industrial companies already have different sensors installed on their machines; however, without proper analysis, the data collected is not useful. This systematic review's main goal is to synthesize the existing evidence on the application of predictive maintenance (PdM) with visual aids and to identify the key knowledge gaps in areas including utilities, power generation, industry, and energy consumption. After a thorough search and evaluation for relevancy, 37 documents were identified. Moreover, we identified the visual analytics of PdM, including anomaly detection, planning/scheduling, exploratory data analysis (EDA), and explainable artificial intelligence (XAI). The findings revealed that anomaly detection was a major domain in PdM-related works. We conclude that most of the literature lacks depth in terms of an overall framework that combines data-driven and knowledge-driven techniques of PdM in the manufacturing industry. Some works that utilized both techniques indicated promising results, but there is insufficient research on involving maintenance personnel's feedback in the latter stage of PdM architecture. Thus, there are still pertinent issues that need to be investigated, and limitations that need to be overcome before PdM is deployed with minimal human involvement.

QDS-COVID: A visual analytics system for interactive exploration of millions of COVID-19 healthcare records in Brazil.

COVID-19 is responsible for the deaths of millions of people around the world. The scientific community has devoted its knowledge to finding ways that reduce the impact and understand the pandemic. In this work, the focus is on analyzing electronic health records for one of the largest public healthcare systems globally, the Brazilian public healthcare system called Sistema Único de Saúde (SUS). SUS collected more than 42 million flu records in a year of the pandemic and made this data publicly available. It is crucial, in this context, to apply analysis techniques that can lead to the optimization of the health care resources in SUS. We propose QDS-COVID, a visual analytics prototype for creating insights over SUS records. The prototype relies on a state-of-the-art datacube structure that supports slicing and dicing exploration of charts and Choropleth maps for all states and municipalities in Brazil. A set of analysis questions drives the development of the prototype and the construction of case studies that demonstrate the potential of the approach. The results include comparisons against other studies and feedback from a medical expert.

Uncovering chains of infections through spatio-temporal and visual analysis of COVID-19 contact traces.

A major challenge for departments of public health (DPHs) in dealing with the ongoing COVID-19 pandemic is tracing contacts in exponentially growing SARS-CoV-2 infection clusters. Prevention of further disease spread requires a comprehensive registration of the connections between individuals and clusters. Due to the high number of infections with unknown origin, the healthcare analysts need to identify connected cases and clusters through accumulated epidemiological knowledge and the metadata of the infections in their database. Here we contribute a visual analytics dashboard to identify, assess and visualize clusters in COVID-19 contact tracing networks. Additionally, we demonstrate how graph-based machine learning methods can be used to find missing links between infection clusters and thus support the mission to get a comprehensive view on infection events. This work was developed through close collaboration with DPHs in Germany. We argue how our dashboard supports the identification of clusters by public health experts, discuss ongoing developments and possible extensions.

Students' multimodal knowledge sharing in school: Spatial repertoires and semiotic assemblages.

In a world 'flooded' with data, students in school need adequate tools as Visual Analytics (VA), that easily process mass data, give support in drawing advanced conclusions and help to make informed predictions in relation to societal circumstances. Methods for how the students' insights may be reformulated and presented in 'appropriate' modes are required as well. Therefore, the aim in this study is to analyse elementary school students' practices of communicating visual discoveries, their insights, as the final stage in the knowledge-building process with an VA-application for interactive data visualization. A design-based intervention study is conducted in one social science classroom to explore modes for students presentation of insights, constructed from the interactive data visualizations. Video captures are used to document 30 students' multifaceted presentations. The analyses are based on concepts from Pennycook (2018) and Deleuze and Guattari (1987). To account for how different modes interact, when students present their findings, one significant empirical sequence is described in detail. The emerging communicative dimensions (visual-, bodily- and verbal-) are embedded within broad spatial repertoires distributing flexible semiotic assemblages. These assemblages provide an incentive for the possibilities of teachers' assessments of their students' knowledge outcomes.

Visual analytics of COVID-19 dissemination in São Paulo state, Brazil.

Visual analytics techniques are useful tools to support decision-making and cope with increasing data, particularly to monitor natural or artificial phenomena. When monitoring disease progression, visual analytics approaches help decision-makers to understand or even prevent dissemination paths. In this paper, we propose a new visual analytics tool for monitoring COVID-19 dissemination. We use k-nearest neighbors of cities to mimic neighboring cities and analyze COVID-19 dissemination based on comparing a city under consideration and its neighborhood. Moreover, such analysis is performed within periods, which facilitates the assessment of isolation policies. We validate our tool by analyzing the progression of COVID-19 in neighboring cities of São Paulo state, Brazil.

How Do We Use Dashboards to Enhance Quality in Cardiac Anesthesia?

The use of clinical dashboards has expanded significantly in healthcare in recent years in a variety of settings. The ability to analyze data related to quality metrics in one screen is highly desirable for cardiac anesthesiologists, as they have considerable influence on important clinical outcomes. Building a robust quality program within cardiac anesthesia relies on consistent access and review of quality outcome measures, process measures, and operational measures through a clinical dashboard. Signals and trends in these measures may be compared to other cardiac surgical programs to analyze gaps and areas for quality improvement efforts. In this article, the authors describe how they designed a clinical cardiac anesthesia dashboard for quality efforts at their institution.

Online Interactive Platform for COVID-19 Literature Visual Analytics: Platform Development Study.

BACKGROUND: Papers on COVID-19 are being published at a high rate and concern many different topics. Innovative tools are needed to aid researchers to find patterns in this vast amount of literature to identify subsets of interest in an automated fashion. OBJECTIVE: We present a new online software resource with a friendly user interface that allows users to query and interact with visual representations of relationships between publications. METHODS: We publicly released an application called PLATIPUS (Publication Literature Analysis and Text Interaction Platform for User Studies) that allows researchers to interact with literature supplied by COVIDScholar via a visual analytics platform. This tool contains standard filtering capabilities based on authors, journals, high-level categories, and various research-specific details via natural language processing and dozens of customizable visualizations that dynamically update from a researcher's query. RESULTS: PLATIPUS is available online and currently links to over 100,000 publications and is still growing. This application has the potential to transform how COVID-19 researchers use public literature to enable their research. CONCLUSIONS: The PLATIPUS application provides the end user with a variety of ways to search, filter, and visualize over 100,00 COVID-19 publications.

NE-Motion: Visual Analysis of Stroke Patients Using Motion Sensor Networks.

A large number of stroke survivors suffer from a significant decrease in upper extremity (UE) function, requiring rehabilitation therapy to boost recovery of UE motion. Assessing the efficacy of treatment strategies is a challenging problem in this context, and is typically accomplished by observing the performance of patients during their execution of daily activities. A more detailed assessment of UE impairment can be undertaken with a clinical bedside test, the UE Fugl-Meyer Assessment, but it fails to examine compensatory movements of functioning body segments that are used to bypass impairment. In this work, we use a graph learning method to build a visualization tool tailored to support the analysis of stroke patients. Called NE-Motion, or Network Environment for Motion Capture Data Analysis, the proposed analytic tool handles a set of time series captured by motion sensors worn by patients so as to enable visual analytic resources to identify abnormalities in movement patterns. Developed in close collaboration with domain experts, NE-Motion is capable of uncovering important phenomena, such as compensation while revealing differences between stroke patients and healthy individuals. The effectiveness of NE-Motion is shown in two case studies designed to analyze particular patients and to compare groups of subjects.

COLAEVA: Visual Analytics and Data Mining Web-Based Tool for Virtual Coaching of Older Adult Populations.

The global population is aging in an unprecedented manner and the challenges for improving the lives of older adults are currently both a strong priority in the political and healthcare arena. In this sense, preventive measures and telemedicine have the potential to play an important role in improving the number of healthy years older adults may experience and virtual coaching is a promising research area to support this process. This paper presents COLAEVA, an interactive web application for older adult population clustering and evolution analysis. Its objective is to support caregivers in the design, validation and refinement of coaching plans adapted to specific population groups. COLAEVA enables coaching caregivers to interactively group similar older adults based on preliminary assessment data, using AI features, and to evaluate the influence of coaching plans once the final assessment is carried out for a baseline comparison. To evaluate COLAEVA, a usability test was carried out with 9 test participants obtaining an average SUS score of 71.1. Moreover, COLAEVA is available online to use and explore.

Automating IoT Data Ingestion Enabling Visual Representation.

The Internet of things has produced several heterogeneous devices and data models for sensors/actuators, physical and virtual. Corresponding data must be aggregated and their models have to be put in relationships with the general knowledge to make them immediately usable by visual analytics tools, APIs, and other devices. In this paper, models and tools for data ingestion and regularization are presented to simplify and enable the automated visual representation of corresponding data. The addressed problems are related to the (i) regularization of the high heterogeneity of data that are available in the IoT devices (physical or virtual) and KPIs (key performance indicators), thus allowing such data in elements of hypercubes to be reported, and (ii) the possibility of providing final users with an index on views and data structures that can be directly exploited by graphical widgets of visual analytics tools, according to different operators. The solution analyzes the loaded data to extract and generate the IoT device model, as well as to create the instances of the device and generate eventual time series. The whole process allows data for visual analytics and dashboarding to be prepared in a few clicks. The proposed IoT device model is compliant with FIWARE NGSI and is supported by a formal definition of data characterization in terms of value type, value unit, and data type. The resulting data model has been enforced into the Snap4City dashboard wizard and tool, which is a GDPR-compliant multitenant architecture. The solution has been developed and validated by considering six different pilots in Europe for collecting big data to monitor and reason people flows and tourism with the aim of improving quality of service; it has been developed in the context of the HERIT-DATA Interreg project and on top of Snap4City infrastructure and tools. The model turned out to be capable of meeting all the requirements of HERIT-DATA, while some of the visual representation tools still need to be updated and furtherly developed to add a few features.

Interactive System for Similarity-Based Inspection and Assessment of the Well-Being of mHealth Users.

Recent digitization technologies empower mHealth users to conveniently record their Ecological Momentary Assessments (EMA) through web applications, smartphones, and wearable devices. These recordings can help clinicians understand how the users' condition changes, but appropriate learning and visualization mechanisms are required for this purpose. We propose a web-based visual analytics tool, which processes clinical data as well as EMAs that were recorded through a mHealth application. The goals we pursue are (1) to predict the condition of the user in the near and the far future, while also identifying the clinical data that mostly contribute to EMA predictions, (2) to identify users with outlier EMA, and (3) to show to what extent the EMAs of a user are in line with or diverge from those users similar to him/her. We report our findings based on a pilot study on patient empowerment, involving tinnitus patients who recorded EMAs with the mHealth app TinnitusTips. To validate our method, we also derived synthetic data from the same pilot study. Based on this setting, results for different use cases are reported.