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1.
Bioorg Chem ; 57: 242-250, 2014 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-25245459

RESUMO

3-Deoxy-d-arabino-heptulosonate 7-phosphate synthase (DAH7PS) catalyses the first committed step of the shikimate pathway, which produces the aromatic amino acids as well as many other aromatic metabolites. DAH7PS catalyses an aldol-like reaction between phosphoenolpyruvate and erythrose 4-phosphate. Three phosphoenolpyruvate mimics, (R)-phospholactate, (S)-phospholactate and vinyl phosphonate [(E)-2-methyl-3-phosphonoacrylate], were found to competitively inhibit DAH7PS from Neisseria meningitidis, which is the pathogen responsible for bacterial meningitis. The most potent inhibitor was the vinyl phosphonate with a Ki value of 3.9±0.4µM. We report for the first time crystal structures of these compounds bound in the active site of a DAH7PS enzyme which reveals that the inhibitors bind to the active site of the enzyme in binding modes that mimic those of the predicted oxocarbenium and tetrahedral intermediates of the enzyme-catalysed reaction. Furthermore, the inhibitors accommodate the binding of a key active site water molecule. Together, these observations provide strong evidence that this active site water participates directly in the DAH7PS reaction, enabling the facial selectivity of the enzyme-catalysed reaction sequence to be delineated.


Assuntos
3-Desoxi-7-Fosfo-Heptulonato Sintase/antagonistas & inibidores , 3-Desoxi-7-Fosfo-Heptulonato Sintase/metabolismo , Inibidores Enzimáticos/química , Meningite Meningocócica/microbiologia , Neisseria meningitidis/enzimologia , Fosfoenolpiruvato/análogos & derivados , 3-Desoxi-7-Fosfo-Heptulonato Sintase/química , Domínio Catalítico , Cristalografia por Raios X , Inibidores Enzimáticos/farmacologia , Humanos , Meningite Meningocócica/tratamento farmacológico , Meningite Meningocócica/enzimologia , Modelos Moleculares , Neisseria meningitidis/química , Neisseria meningitidis/efeitos dos fármacos , Fosfoenolpiruvato/farmacologia , Água/química
2.
Biochemistry ; 52(1): 1-3, 2013 Jan 08.
Artigo em Inglês | MEDLINE | ID: mdl-23256782

RESUMO

A series of substrate analogues has been used to determine which chemical moieties of the substrate phosphoenolpyruvate (PEP) contribute to the allosteric inhibition of rabbit muscle pyruvate kinase by phenylalanine. Replacing the carboxyl group of the substrate with a methyl alcohol or removing the phosphate altogether greatly reduces substrate affinity. However, removal of the carboxyl group is the only modification tested that removes the ability to allosterically reduce the level of Phe binding. From this, it can be concluded that the carboxyl group of PEP is responsible for energetic coupling with Phe binding in the allosteric sites.


Assuntos
Músculos/enzimologia , Fenilalanina/metabolismo , Fosfoenolpiruvato/química , Fosfoenolpiruvato/metabolismo , Piruvato Quinase/metabolismo , Regulação Alostérica , Sítio Alostérico , Animais , Músculos/química , Fosfoenolpiruvato/análogos & derivados , Ligação Proteica , Piruvato Quinase/química , Coelhos , Especificidade por Substrato
3.
J Am Chem Soc ; 134(31): 12947-57, 2012 Aug 08.
Artigo em Inglês | MEDLINE | ID: mdl-22765168

RESUMO

Proton transfer to carbon represents a significant catalytic challenge because of the large intrinsic energetic barrier and the frequently unfavorable thermodynamics. Multiple kinetic isotope effects (KIEs) were measured for acid-catalyzed hydrolysis of the enol ether functionality of enolpyruvylshikimate 3-phosphate (EPSP) as a nonenzymatic analog of the EPSP synthase (AroA) reaction. The large solvent deuterium KIE demonstrated that protonating C3 was the rate-limiting step, and the lack of solvent hydron exchange into EPSP demonstrated that protonation was irreversible. The reaction mechanism was stepwise, with C3, the methylene carbon, being protonated to form a discrete oxacarbenium ion intermediate before water attack at the cationic center, that is, an AH(‡)*AN (or AH(‡) + AN) mechanism. The calculated 3-(14)C and 3,3-(2)H2 KIEs varied as a function of the extent of proton transfer at the transition state, as reflected in the C3-H(+) bond order, nC3-H+. The calculated 3-(14)C KIE was a function primarily of C3 coupling with the movement of the transferring proton, as reflected in the reaction coordinate contribution ((light)ν(‡)/(heavy)ν(‡)), rather than of changes in bonding. Coupling was strongest in early and late transition states, where the reaction coordinate frequency was lower. The other calculated (14)C and (18)O KIEs were more sensitive to interactions with counterions and solvation in the model structures than nC3-H+. The KIEs revealed a moderately late transition state with significant oxacarbenium ion character and with a C3-H(+) bond order ≈0.6.


Assuntos
Éteres/química , Hidrólise , Fosfoenolpiruvato/análogos & derivados , Fosfoenolpiruvato/química , Prótons , Ácido Chiquímico/análogos & derivados , Ácido Chiquímico/química , 3-Fosfoshikimato 1-Carboxiviniltransferase/metabolismo , Radioisótopos de Carbono , Deutério , Cinética , Isótopos de Oxigênio , Teoria Quântica
4.
Bioorg Chem ; 40(1): 48-56, 2012 Feb.
Artigo em Inglês | MEDLINE | ID: mdl-22204982

RESUMO

We herein report two innovative methods toward aldehyde enolphosphates and the first saccharidic aldehyde enolphosphates. Aldehyde enolphosphate function is worthwhile to be considered as a good phosphoenolpyruvate analogue.


Assuntos
Aldeídos/química , Fosfoenolpiruvato/análogos & derivados , Alumínio/química , Iodetos/química , Monossacarídeos/química , Fosfoenolpiruvato/síntese química , Fosforilação
5.
Biol Pharm Bull ; 35(4): 606-11, 2012.
Artigo em Inglês | MEDLINE | ID: mdl-22466568

RESUMO

This study examined the cytoprotective and anti-oxidative properties of phosphoenolpyruvic acid (PEP), a glycolysis metabolite with a high-energy phosphate group. PEP (0.1-10 mM) significantly attenuated the decrease in cell viability induced by hydrogen peroxide (H(2)O(2)) in HeLa cells in a dose-dependent manner. PEP also inhibited the decrease in calcein-acetomethoxy-stained cells and the increase in propidium iodide-stained cells that were induced by H(2)O(2). The H(2)O(2)-stimulated increase in intracellular reactive oxygen species was significantly reduced by PEP. PEP also demonstrated scavenging potential against hydroxyl radicals, as assessed by the electron paramagnetic resonance method. In addition, PEP demonstrated scavenging potential against the 1,1-diphenyl-2-picrylhydrazyl radical, a representative artificial radical, although the potential is very weak. PEP (10 mM) slightly inhibited the decrease in cellular ATP content induced by H(2)O(2), but did not show any effects at low doses (0.1, 1 mM). PEP (0.1-10 mM) also attenuated the cell injury but not the decrease in intracellular ATP content, induced by 2-deoxy-D-glucose, a glycolysis inhibitor. These results indicate that PEP exerts cytoprotective effects and has anti-oxidative potential, although the precise cytoprotective mechanisms are not fully elucidated. We suggest that PEP is a functional carbohydrate metabolite with cytoprotective and anti-oxidative activity, and is potentially useful as a therapeutic agent against diseases that involve the oxidative stress.


Assuntos
Antioxidantes/farmacologia , Citoproteção/efeitos dos fármacos , Fosfoenolpiruvato/análogos & derivados , Trifosfato de Adenosina/antagonistas & inibidores , Trifosfato de Adenosina/metabolismo , Sobrevivência Celular/efeitos dos fármacos , Desoxiglucose/farmacologia , Glicólise , Células HeLa , Humanos , Peróxido de Hidrogênio/farmacologia , Oxidantes/farmacologia , Fosfoenolpiruvato/farmacologia
6.
Biochim Biophys Acta ; 384(1): 120-6, 1975 Mar 28.
Artigo em Inglês | MEDLINE | ID: mdl-1093568

RESUMO

Three analogs of phosphoenolpyruvic acid: (Z)-phosphoenol-3-fluoropyruvate, (Z)-phosphoenol-3-bromopyruvate and (Z)-phosphoenol-alpha-ketobutyrate were found to be substrates for yeast pyruvate kinase (ATP: pyruvate (Z)-O-phosphotransferase, EC 2.7.1.40)with maximal velocities much greater than those found for rabbit muscle pyruvate kinase. The analogs exhibited sigmoidal kinetics, which become hyperbolic upon addition of the allosteric effector, fructose 1,6-diphosphate. Moreover, the reaction of (Z)-phosphoenol-3-bromopyruvate with ADP to produce bromopyruvic acid and ATP irreversibly inhibited the enzyme with a half-life of 32 min.


Assuntos
Piruvato Quinase/metabolismo , Saccharomyces cerevisiae/enzimologia , Trifosfato de Adenosina/farmacologia , Bromo , Butiratos , Flúor , Frutosefosfatos/farmacologia , Cinética , Fosfoenolpiruvato/análogos & derivados , Fosfoenolpiruvato/farmacologia
7.
Biochim Biophys Acta ; 1386(1): 132-44, 1998 Jul 28.
Artigo em Inglês | MEDLINE | ID: mdl-9675261

RESUMO

The antibiotic phosphomycin (1,2-epoxypropylphosphonic acid), an analog of phosphoenolpyruvate (PEP), behaved not as an inhibitor, but as an activator, of the enzyme phosphoenolpyruvate carboxylase (PEPC) from maize leaves. Multiple activation studies indicated that the analog binds to the Glc6P-allosteric site producing a more activated enzyme than Glc6P itself. Because of this, we used phosphomycin as a tool to further extend our understanding of the mechanisms of allosteric regulation of C4-PEPC. Initial velocity data from detailed kinetic studies, in which the concentrations of free and Mg-complexed PEP and phosphomycin were controlled, are consistent with: (1) the true activator is free phosphomycin, which competes with free PEP for the Glc6P-allosteric site; and (2) the Mg-phosphomycin complex caused inhibition by binding to the active site in competition with MgPEP. Therefore, although the Glc6P-allosteric site and the active site are able to bind the same ligands, they differ in the form of substrate and activator they bind. This important difference allows the full expression of the potential of activation and prevents inhibition by the activators, including the physiological ones, which are mostly uncomplexed at physiological free Mg2+ concentrations. At fixed low substrate concentrations, the saturation kinetics of the enzyme by phosphomycin showed positive cooperativity at pH 7.3 and 8.3, although at the latter pH, the kinetics of saturation by the substrate was hyperbolic. The cosolute glycerol greatly increased the affinity of the enzyme for phosphomycin and abolished the cooperativity in its binding, but did not eliminate the heterotropic effects of the activator. Therefore, the heterotropic and homotropic effects of the activator are not always coupled to the homotropic effects of the substrate, which argues against the two-state model previously proposed to explain the allosteric properties of maize-leaf PEPC.


Assuntos
Fosfomicina/metabolismo , Fosfoenolpiruvato Carboxilase/metabolismo , Fosfoenolpiruvato/análogos & derivados , Folhas de Planta/enzimologia , Zea mays/enzimologia , Regulação Alostérica , Interações Medicamentosas , Ativação Enzimática , Fosfomicina/farmacologia , Glicerol/farmacologia , Cinética , Magnésio/metabolismo , Modelos Químicos
8.
Biochim Biophys Acta ; 616(2): 389-94, 1980 Dec 04.
Artigo em Inglês | MEDLINE | ID: mdl-7213646

RESUMO

Effect of several phosphoenolpyruvate analogs on the activity of enoylpyruvate (phosphoenolpyruvate: UDP-2-acetamido-2-deoxy-D-glucose 2-enoyl-1-carboxyethyltransferase, EC 2.5.1.7) transferase was examined. The results suggest that the phosphoenolpyruvate binding site of the transferase is very similar to that of pyruvate kinase (ATP: pyruvate 2-O-phosphotransferase, EC 2.7.1.40). Evidence is presented to show that the binding of UDP-GlcNAc to the transferase enhances the reactivity of the active site SH group.


Assuntos
Alquil e Aril Transferases , Fosfoenolpiruvato/análogos & derivados , Transferases/metabolismo , Uridina Difosfato N-Acetilglicosamina/farmacologia , Açúcares de Uridina Difosfato/farmacologia , Sítios de Ligação , Técnicas In Vitro , Iodoacetatos/farmacologia , Fosfoenolpiruvato/antagonistas & inibidores , Fosfoenolpiruvato/metabolismo , Fosfoenolpiruvato/farmacologia , Piruvato Quinase/metabolismo , Compostos de Sulfidrila , Transferases/antagonistas & inibidores , Uridina Difosfato N-Acetilglicosamina/antagonistas & inibidores , Uridina Difosfato N-Acetilglicosamina/metabolismo
9.
J Biochem ; 94(6): 1789-95, 1983 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-6368527

RESUMO

In an attempt to investigate the topography of the catalytic site of phosphoenolpyruvate (PEP) carboxylase [EC 4.1.1.31] of Escherichia coli, the inhibitor constants (Ki) for more than 20 compounds were determined with the reaction system containing dioxane, a non-physiological activator of the enzyme. The Ki values for the compounds lacking methylene-, carboxylate-, or phosphate groups were all more than 10-fold larger than the Km value for PEP, indicating the significant contribution of these groups to the binding of PEP with the enzyme. The Ki value for L-phospholactate (0.30 mM) was almost equal to the Km value for PEP (0.25 mM), whereas that for D-phospholactate (0.89 mM) was about 3-fold larger than the Km value. It was presumed that PEP binds with the enzyme on its si-side. Among 6 PEP homologs, the Ki values for phosphoenol alpha-ketobutyrate (0.024 mM) and phosphoenol alpha-ketovalerate (0.034 mM) were about one-tenth the Km value, indicating the presence of a hydrophobic pocket around the binding site of the methylene group of PEP, where the carboxylation reaction is supposed to occur. DL-Phosphomalate, a presumptive carboxylated substrate, was a weak inhibitor with a Ki value of 2.20 mM.


Assuntos
Carboxiliases/antagonistas & inibidores , Escherichia coli/enzimologia , Fosfoenolpiruvato Carboxilase/antagonistas & inibidores , Fosfoenolpiruvato/análogos & derivados , Sítios de Ligação , Cinética , Fosfoenolpiruvato/farmacologia , Relação Estrutura-Atividade
10.
J Biochem ; 95(3): 637-42, 1984 Mar.
Artigo em Inglês | MEDLINE | ID: mdl-6373747

RESUMO

An investigation was performed to elucidate some unusual phenomena which had been observed with phosphoenolpyruvate (PEP) carboxylase [EC 4.1.1.31] of Escherichia coli. (i) Fructose 1,6-bisphosphate (Fru-1,6-P2) and GTP--the allosteric activators--were competitive with each other in the activation. (ii) Some analogs of PEP such as DL-2-phospholactate and 2-phosphoglycolate, which behaved as inhibitors in the presence of the activator (acetyl-CoA or dioxane), activated the enzyme to some extent in the absence of the activator. (iii) Ammonium sulfate deprived the enzyme of sensitivity to Fru-1,6-P2 or GTP but had no effect on the sensitivity to other effectors. It was found that the activation by the analogs was lost upon desensitization of the enzyme to Fru-1,6-P2 by reaction with 2,4,6-trinitrobenzene sulfonate. The activation by the analogs was not observed in the presence of 200 mM ammonium sulfate. In the presence of lower concentrations (0.1 mM) of PEP, ammonium sulfate activated the enzyme at concentrations less than 700 mM but had an inhibitory effect on the desensitized enzyme. These findings suggest that the unusual phenomena described above are a result of binding of the phosphate esters and sulfate ions with the Fru-1,6-P2 site of the enzyme or the active site depending on the reaction conditions.


Assuntos
Carboxiliases/metabolismo , Escherichia coli/enzimologia , Frutosedifosfatos/farmacologia , Hexosedifosfatos/farmacologia , Fosfoenolpiruvato Carboxilase/metabolismo , Sítio Alostérico , Sulfato de Amônio/farmacologia , Ativação Enzimática/efeitos dos fármacos , Fosfoenolpiruvato/análogos & derivados , Fosfoenolpiruvato/farmacologia , Estereoisomerismo , Ácido Trinitrobenzenossulfônico/farmacologia
11.
Ann Clin Biochem ; 12(2): 58-65, 1975 Mar.
Artigo em Inglês | MEDLINE | ID: mdl-15637925

RESUMO

The efflux of lactate dehydrogenase and haemoglobin from human erythrocytes during prolonged incubation at 37 degrees was significantly reduced by ATP, ADP, AMP, UTP, creatine phosphate, or phosphoenolpyruvate and to a lesser extent by fructose, glucose 6-phosphate or fructose 6-phosphate, but not by glucose. Iodoacetate, however, markedly increased the loss of haemoglobin and slightly increased that of lactate dehydrogenase. Phospholipase C greatly accelerated the relase of haemoglobin, lactate dehydrogenase, pyruvate kinase, hexokinase, glucose 6-phosphate dehydrogenase, and 6-phosphogluconate dehydrogenase from human erythrocytes, but this effect was also reduced in the presence of ATP or ADP. The loss of lactate dehydrogenase, malate dehydrogenase, and pyruvate kinase from the cells treated with phospholipase C increased as their ATP content fell. In a series of experiments in which the action of phospholipase C was stopped by the subsequent addition of trypsin, ATP and ADP (1 mmol/l) significantly reduced the efflux of haemoglobin, but AMP had no such effect. The results are consistent with the conclusion from our previous work that enzyme leakage is related to diminution in the energy content of the cells. The protective action of AMP on cells not treated with phospholipase C, however, differs from earlier findings with rat lymphocytes and it is suggested that in red cells it might be converted into ATP or that it has a direct effect on the permeability of the cell membrane.


Assuntos
Eritrócitos/química , Eritrócitos/enzimologia , Hemoglobinas/metabolismo , Fosfoenolpiruvato/análogos & derivados , Difosfato de Adenosina/farmacologia , Monofosfato de Adenosina/farmacologia , Trifosfato de Adenosina/farmacologia , Adenilato Quinase/metabolismo , Eritrócitos/efeitos dos fármacos , Frutosefosfatos/farmacologia , Glucose-6-Fosfato/farmacologia , Humanos , Ácido Iodoacético/farmacologia , Cinética , L-Lactato Desidrogenase/metabolismo , Fosfocreatina/farmacologia , Fosfoenolpiruvato/farmacologia , Piruvato Quinase/metabolismo , Fosfolipases Tipo C/farmacologia , Uridina Trifosfato/farmacologia
12.
Biochemistry ; 44(19): 7326-35, 2005 May 17.
Artigo em Inglês | MEDLINE | ID: mdl-15882071

RESUMO

The enzymes 3-deoxy-d-manno-2-octulosonate-8-phosphate (KDO8P) synthase and 3-deoxy-d-arabino-2-heptulosonate-7-phosphate (DAHP) synthase catalyze a similar aldol-type condensation between phosphoenolpyruvate (PEP) and the corresponding aldose: arabinose 5-phosphate (A5P) and erythrose 4-phosphate (E4P), respectively. While KDO8P synthase is metal-dependent in one class of organisms and metal-independent in another, only a metal-dependent class of DAHP synthases has thus far been identified in nature. We have used catalytically active E and Z isomers of phosphoenol-3-fluoropyruvate [(E)- and (Z)-FPEP, respectively] as mechanistic probes to characterize the differences and/or the similarities between the metal-dependent and metal-independent KDO8P synthases as well as between the metal-dependent KDO8P synthase and DAHP synthase. The direct evidence of the overall stereochemistry of the metal-dependent Aquifex pyrophilus KDO8P synthase (ApKDO8PS) reaction was obtained by using (E)- and (Z)-FPEPs as alternative substrates and by subsequent (19)F NMR analysis of the products. The results reveal the si face addition of the PEP to the re face of the carbonyl of A5P, and establish that the stereochemistry of ApKDO8PS is identical to that of the metal-independent Escherichia coli KDO8P synthase enzyme (EcKDO8PS). In addition, both ApKDO8PS and EcKDO8PS enzymes exhibit high selectivity for (E)-FPEP versus (Z)-FPEP, the relative k(cat)/K(m) ratios being 100 and 33, respectively. In contrast, DAHP synthase does not discriminate between (E)- and (Z)-FPEP (the k(cat)/K(m) being approximately 7 x 10(-)(3) microM(-)(1) s(-)(1) for both compounds). The pre-steady-state burst experiments for EcKDO8PS showed that product release is rate-limiting for the reactions performed with either PEP, (E)-FPEP, or (Z)-FPEP, although the rate constants, for both product formation and product release, were lower for the fluorinated analogues than for PEP [125 and 2.3 s(-)(1) for PEP, 2.5 and 0.2 s(-)(1) for (E)-FPEP, and 9 and 0.1 s(-)(1) for (Z)-FPEP, respectively]. The observed data indicate substantial differences in the PEP subsites and open the opportunity for the design of selective inhibitors against these two families of enzymes.


Assuntos
3-Desoxi-7-Fosfo-Heptulonato Sintase/metabolismo , Aldeído Liases/metabolismo , Proteínas de Bactérias/metabolismo , Proteínas de Escherichia coli/metabolismo , Fosfoenolpiruvato/análogos & derivados , Fosfoenolpiruvato/metabolismo , 3-Desoxi-7-Fosfo-Heptulonato Sintase/química , Aldeído Liases/química , Proteínas de Bactérias/química , Sítios de Ligação , Radioisótopos de Carbono/metabolismo , Catálise , Cromatografia Líquida de Alta Pressão , Proteínas de Escherichia coli/química , Cinética , Pentosefosfatos/química , Pentosefosfatos/metabolismo , Fosfoenolpiruvato/química , Estereoisomerismo , Especificidade por Substrato , Fosfatos Açúcares/química , Fosfatos Açúcares/metabolismo
13.
Acta Crystallogr B ; 52 ( Pt 5): 865-75, 1996 Oct 01.
Artigo em Inglês | MEDLINE | ID: mdl-8900032

RESUMO

The crystal structure of (C6H11NH3+)3. Pep3-.H2O, where Pep3- = (O-)2P(O)-O-C(CH2)-CO2-, is reported and the systematic structural variations among 19 crystallographic occurrences of H3Pep, H2Pep-, HPep2- and Pep3- species, which are important phosphate donors in the ATP cycle of bioenergetics, are reviewed. Tris(cyclohexylammonium) phosphoenolpyruvate monohydrate, (C6H11NH3+)3.-[O3POC(CH2)CO2]3-.H2O, M(r) = 483.6, m.p. 418-420K; T = 296(1)K; orthorhombic, P2(1)2(1)2(1); a = 16.7042(5), b = 24.4881 (6), c = 6.38910 (10) A; V = 2613.49(11) A3, Z = 4, Dx = 1.23, Dm = 1.22 mg mm-3, mu = 0.14 mm-1 for lambda(MoK alpha) = 0.7107 A; F(000) = 1056 e; R(magnitude of F) = 0.0608 for 6056 hkl and hkl data with (sin theta)/lambda < or = 0.65 A-1.


Assuntos
Fosfoenolpiruvato/análogos & derivados , Cristalografia por Raios X , Ligação de Hidrogênio , Estrutura Molecular
14.
Arch Biochem Biophys ; 277(1): 143-8, 1990 Feb 15.
Artigo em Inglês | MEDLINE | ID: mdl-2306115

RESUMO

(Z)-3-Chlorophosphoenolpyruvate has been synthesized by the reaction of 3,3-dichloropyruvic acid with trimethylphosphite, followed by deesterification. This compound is a competitive inhibitor of pyruvate kinase and phosphoenolpyruvate carboxylase. Pyruvate kinase is not inactivated upon prolonged incubation with the compound, but phosphoenolpyruvate carboxylase is slowly inactivated (t1/2 = 5 h). The compound is a substrate for both enzymes, being acted upon by pyruvate kinase approximately 0.1% as rapidly as phosphoenolpyruvate itself. In the case of phosphoenolpyruvate carboxylase, the compound is converted into a 3:1 mixture of chloropyruvate and chlorooxalacetate, at an overall rate that is about 25% the carboxylation rate for phosphoenolpyruvate.


Assuntos
Carboxiliases/antagonistas & inibidores , Fosfoenolpiruvato Carboxilase/antagonistas & inibidores , Fosfoenolpiruvato/análogos & derivados , Piruvato Quinase/antagonistas & inibidores , Ligação Competitiva , Indicadores e Reagentes , Isomerismo , Fosfoenolpiruvato/síntese química , Fosfoenolpiruvato/farmacologia , Especificidade por Substrato
15.
Biochemistry ; 27(4): 1355-60, 1988 Feb 23.
Artigo em Inglês | MEDLINE | ID: mdl-3365391

RESUMO

1-Carboxyallenyl phosphate, the allenic homologue of phosphoenolpyruvate, has been synthesized in six steps. The key step in the synthesis is the isomerization of methyl 2-hydroxy-3-butynoate to the corresponding allenol and phosphorylation of this material. The allene is an excellent substrate for pyruvate kinase, undergoing reaction at more than half the rate of phosphoenolpyruvate. The allene is also a substrate for phosphoenolpyruvate carboxylase, being hydrolyzed by the enzyme rather than carboxylated. With both enzymes, the organic product is 2-oxo-3-butenoate, which gradually inactivates the enzymes by reaction with one or more sulfhydryl groups not at the active site.


Assuntos
Carboxiliases/metabolismo , Fosfoenolpiruvato Carboxilase/metabolismo , Fosfoenolpiruvato/análogos & derivados , Piruvato Quinase/metabolismo , Indicadores e Reagentes , Cinética , Espectroscopia de Ressonância Magnética , Fosfoenolpiruvato/síntese química , Fosfoenolpiruvato/metabolismo , Fosfoenolpiruvato/farmacologia , Especificidade por Substrato
16.
Biochem J ; 253(1): 217-22, 1988 Jul 01.
Artigo em Inglês | MEDLINE | ID: mdl-3421944

RESUMO

The analogue (Z)-phosphoenol-3-fluoropyruvate [(Z)-3-fluoro-2-(phosphono-oxy)propenoic acid] was tested as substrate of maize leaf phosphoenolpyruvate carboxylase. Studies with NaH14CO3 indicate that the analogue is carboxylated by the enzyme. However, this reaction accounts for only one-tenth of the activity measured by Pi liberation. The rest of the analogue is merely dephosphorylated. This is the first analogue for which both carboxylation and dephosphorylation have been observed.


Assuntos
Carboxiliases/metabolismo , Fosfoenolpiruvato Carboxilase/metabolismo , Fosfoenolpiruvato/análogos & derivados , Zea mays/enzimologia , Bicarbonatos/metabolismo , Radioisótopos de Carbono , Cromatografia Líquida de Alta Pressão , Hidrazonas/metabolismo , Fosfoenolpiruvato/metabolismo , Espectrofotometria
17.
Biochemistry ; 24(5): 1152-60, 1985 Feb 26.
Artigo em Inglês | MEDLINE | ID: mdl-4096895

RESUMO

The interactions of the substrate phosphoenolpyruvate and the substrate analogues (Z)-phosphoenol-alpha-ketobutyrate and (E)-phosphoenol-alpha-ketobutyrate with the enzyme-Mn complex of chicken liver phosphoenolpyruvate carboxykinase have been investigated by 1H and by 31P nuclear relaxation rate studies. Studies of the 1H and the 31P relaxation rates of the ligands in the binary Mn-ligand complexes show that these ligands interact with the metal ion via the phosphate group but not through the carboxylate. An inner sphere coordination complex is formed but the metal-ligand complex is not in the most extended conformation. In the relaxation rate studies of the ligands in the presence of the enzyme, conditions were adjusted so that all of the Mn2+ that was added resided in the ternary enzyme-Mn-ligand complex. The 1H relaxation rates for each of the three ligands were measured at 100 and at 300 MHz. In each case the normalized paramagnetic effects showed that 1/(pT2p) was greater than 1/(pT1p). A frequency dependence of the 1/(pT1p) and 1/(pT2p) values was also measured. The correlation time, tau c, for the Mn-1H interaction was calculated from the frequency dependence of 1/(pT1p) assuming a maximal frequency dependence of tau c and assuming no frequency dependence of tau c and from the T1M/T2M ratios at each frequency. The tau c values for all of the complexes, calculated at 100 MHz, varied from approximately 0.3 to 2.0 ns. These values were used to calculate the Mn-1H distances in each of the ternary complexes. The relaxation rates of 31P were also measured.(ABSTRACT TRUNCATED AT 250 WORDS)


Assuntos
Fosfoenolpiruvato Carboxiquinase (GTP)/metabolismo , Fosfoenolpiruvato/análogos & derivados , Fosfoenolpiruvato/metabolismo , Animais , Sítios de Ligação , Galinhas , Cinética , Fígado/enzimologia , Espectroscopia de Ressonância Magnética/métodos , Matemática , Ligação Proteica , Conformação Proteica , Estereoisomerismo , Relação Estrutura-Atividade
18.
Drug Des Discov ; 18(2-3): 91-9, 2003.
Artigo em Inglês | MEDLINE | ID: mdl-14675946

RESUMO

3-Deoxy-D-manno-octulosonate 8-phosphate (KDO8P) is the phosphorylated precursor of KDO, an essential sugar of the lipopolysaccharide of Gram negative bacteria. KDO8P is produced by a specific synthase (KDO8PS) by condensing arabinose 5-phosphate (A5P) and phosphoenolpyruvate (PEP), with release of inorganic phosphate. As KDO8PS is present in bacteria and plants, but not in mammalian cells, and mutations that inactivate KDO8PS also block cell replication, KDO8PS is a promising target for the design of new antimicrobials that act by blocking lipopolysaccharide biosynthesis. Previous studies have shown that a compound mimicking an intermediate of the condensation reaction is a good ligand and a powerful inhibitor. Here we report on the crystallographic investigation of the binding to KDO8PS of new derivatives of this original inhibitor. The structures of the enzyme in complex with these compounds, and also with the PEP analogs, 2-phosphoglyceric acid (2-PGA) and Z-methyl-PEP, point to future strategies for the design of novel inhibitors of KDO8PS.


Assuntos
Aldeído Liases/antagonistas & inibidores , Aldeído Liases/química , Sítios de Ligação , Cristalografia por Raios X , Ácidos Glicéricos/química , Bactérias Gram-Negativas/química , Modelos Moleculares , Fosfoenolpiruvato/análogos & derivados , Fosfoenolpiruvato/química , Ligação Proteica , Estereoisomerismo , Relação Estrutura-Atividade , Açúcares Ácidos/química
19.
Arch Biochem Biophys ; 269(2): 646-63, 1989 Mar.
Artigo em Inglês | MEDLINE | ID: mdl-2919888

RESUMO

The stereospecific interactions of chicken liver phosphoenolpyruvate carboxykinase (P-enolpyruvate carboxykinase) with the two geometric isomers of 3-fluorophosphoenolpyruvate (F-P-enolpyruvate) were examined. Previous studies have shown that the Z isomer of F-P-enolpyruvate is a substrate for P-enolpyruvate carboxykinase but the E isomer is a competitive inhibitor [T. H. Duffy and T. Nowak (1984) Biochemistry 23, 661-670]. The reasons for this substrate selectivity were investigated. Studies of the 1H, 19F, and 31P relaxation rates of the ligands in the binary Mn-ligand complexes indicate the formation of direct coordination complexes. The temperature and frequency dependence of the proton relaxation rates (PRR) of the respective enzyme-Mn-ligand complexes demonstrates that the perturbation of the electronic environment at the Mn(II) site on the enzyme is different upon binding of the inhibitor (E-F-P-enolpyruvate) in contrast to the binding of substrates (P-enolpyruvate or Z-F-P-enolpyruvate). Structural studies demonstrate that Z-F-P-enolpyruvate forms a second sphere coordination complex with enzyme-bound Mn(II). E-F-P-enolpyruvate exchanges slowly from the ternary complex and binds less than or equal to 10 A from the bound Mn(II). CD studies in the far-uv region demonstrate that the alpha-helical content of P-enolpyruvate carboxykinase is increased at the expense of antiparallel and parallel beta-sheet structure upon binding of Mn(II) and substrate (P-enolpyruvate or Z-F-P-enolpyruvate) to the apoenzyme, but show no such structural change upon binding of Mn(II) and E-F-P-enolpyruvate. Analogous results are observed from CD studies at the aromatic amino acid region (250-350 nm). The stereoselective catalytic activities of P-enolpyruvate carboxykinase with F-P-enolpyruvate analogs can be explained by different interactions of these ligands within the catalytic site of the enzyme.


Assuntos
Fígado/enzimologia , Fosfoenolpiruvato/análogos & derivados , Animais , Galinhas , Cinética , Ligantes , Espectroscopia de Ressonância Magnética/métodos , Manganês/farmacologia , Matemática , Modelos Teóricos , Fosfoenolpiruvato/metabolismo , Fosfoenolpiruvato Carboxiquinase (GTP)/metabolismo , Estereoisomerismo , Termodinâmica
20.
Biochemistry ; 23(4): 661-70, 1984 Feb 14.
Artigo em Inglês | MEDLINE | ID: mdl-6712918

RESUMO

The halogenated phosphoenolpyruvate analogues (Z)-phosphoenol-3-fluoropyruvate, (E)-phosphoenol-3-fluoropyruvate, and (Z)-phosphoenol-3-bromopyruvate were synthesized and purified. The analogues were characterized by 1H and by 19F NMR where applicable. Absolute stereoselectivity of the fluorophosphoenolpyruvate isomers as substrates with the enzymes phosphoenolpyruvate carboxykinase, enolase, and pyruvate phosphate dikinase was observed. The Z isomer exhibited substrate activity with these enzymes while no substrate activity was measured with the E isomer. Both isomers exhibited substrate activity with the enzyme pyruvate kinase, however, with a substantial decrease in the Vmax/Km ratio compared to phosphoenolpyruvate as the substrate. A metal ion dependent stereoselectivity of inhibition was measured for these analogues with the enzymes phosphoenolpyruvate carboxykinase, enolase, and pyruvate kinase. The cation activator appears to affect the specificity and thus the catalytic site of these enzymes. Proton longitudinal relaxation rate titrations demonstrate that the dissociation constants, K3, of the fluorophosphoenolpyruvate isomers from the enzyme-Mn complex agree, in most cases, with the measured KI values and analogue binding resembles phosphoenolpyruvate binding. With the enzyme phosphoenolpyruvate carboxykinase, the KI not equal to K3 for (E)-fluorophosphoenolpyruvate which suggests that the binding of the E isomer is affected by the presence of the other substrates. The halogenated derivatives apparently undergo an enzyme-Mn catalyzed Michael-type addition reaction with the bromo-substituted analogue decomposing much faster than the fluoro analogues.


Assuntos
Fosfoenolpiruvato Carboxiquinase (GTP)/metabolismo , Fosfoenolpiruvato/análogos & derivados , Fosfopiruvato Hidratase/metabolismo , Piruvato Quinase/metabolismo , Animais , Cinética , Coelhos , Estereoisomerismo , Especificidade por Substrato
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