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1.
PLoS Pathog ; 15(8): e1007952, 2019 08.
Artigo em Inglês | MEDLINE | ID: mdl-31408509

RESUMO

The two-component signalling system (TCS) comprising a histidine kinase (HK) and a response regulator (RR) is the predominant bacterial sense-and-response machinery. Because bacterial cells usually encode a number of TCSs to adapt to various ecological niches, the specificity of a TCS is in the centre of regulation. Specificity of TCS is defined by the capability and velocity of phosphoryl transfer between a cognate HK and a RR. Here, we provide genetic, enzymology and structural data demonstrating that the second messenger cyclic-di-GMP physically and specifically binds to RavS, a HK of the phytopathogenic, gram-negative bacterium Xanthomonas campestris pv. campestris. The [c-di-GMP]-RavS interaction substantially promotes specificity between RavS and RavR, a GGDEF-EAL domain-containing RR, by reinforcing the kinetic preference of RavS to phosphorylate RavR. [c-di-GMP]-RavS binding effectively decreases the phosphorylation level of RavS and negatively regulates bacterial swimming. Intriguingly, the EAL domain of RavR counteracts the above regulation by degrading c-di-GMP and then increasing the level of phosphorylated RavS. Therefore, RavR acts as a bifunctional phosphate sink that finely controls the level of phosphorylated RavS. These biochemical processes interactively modulate the phosphoryl flux between RavS-RavR and bacterial lifestyle transition. Our results revealed that c-di-GMP acts as an allosteric effector to dynamically modulate specificity between HK and RR.


Assuntos
Proteínas de Bactérias/metabolismo , GMP Cíclico/análogos & derivados , Flagelos/fisiologia , Regulação Bacteriana da Expressão Gênica , Histidina Quinase/metabolismo , Virulência/fisiologia , Xanthomonas campestris/crescimento & desenvolvimento , Proteínas de Bactérias/genética , Biofilmes/crescimento & desenvolvimento , GMP Cíclico/metabolismo , Histidina Quinase/genética , Fosforilação , Transdução de Sinais , Xanthomonas campestris/genética , Xanthomonas campestris/metabolismo
2.
Biotechnol Bioeng ; 116(12): 3215-3227, 2019 12.
Artigo em Inglês | MEDLINE | ID: mdl-31429921

RESUMO

Oxygen supply is one of the most critical process parameters in aerobic cultivations. To assure sufficient oxygen supply, shake flasks are usually used in combination with orbital shaking machines. In this study, a measurement technique for the dissolved oxygen tension (DOT) in shake flask cultures with viscosity changes is presented. The movement of the shaker table is monitored by means of a Hall effect sensor. For DOT measurements, infrared fluorescent oxygen-sensitive nanoparticles are added to the culture broth. The position of the rotating bulk liquid needs to be determined to assure measurements inside the liquid. The leading edge of the bulk liquid is detected based on the fluorescence signal intensity of the oxygen-sensitive nanoparticles. Furthermore, online information about the viscosity of the culture broth is acquired due to the detection of the position of the leading edge of the bulk liquid relative to the direction of the centrifugal force, as described by Sieben et al. (2019. Sci. Rep., 9, 8335). The DOT measurement is combined with a respiration activity monitoring system which allows for the determination of the oxygen transfer rate (OTR) in eight parallel shake flasks. Based on DOT and OTR, the volumetric oxygen transfer coefficient (kL a) is calculated during cultivation. The new system was successfully applied in cultivations of Escherichia coli, Bacillus licheniformis, and Xanthomonas campestris.


Assuntos
Bacillus licheniformis/crescimento & desenvolvimento , Escherichia coli/crescimento & desenvolvimento , Corantes Fluorescentes/química , Raios Infravermelhos , Nanopartículas/química , Oxigênio/análise , Xanthomonas campestris/crescimento & desenvolvimento , Fluorescência , Oxigênio/metabolismo
3.
Curr Microbiol ; 76(5): 613-619, 2019 May.
Artigo em Inglês | MEDLINE | ID: mdl-30863882

RESUMO

Black rot is a cruciferous disease caused by Xanthomonas campestris pv. campestris (Xcc) and results in significant economic losses worldwide; therefore, elucidation of the mechanism of Xcc pathogenesis is urgently required. In this study, we aimed to select optimized reference genes to verify the relative quantification of virulent genes in Xcc. Xcc strains were cultured in three different media [basic medium (MMX), hrp-inducing medium (MMXC) and rich medium (NYG)] and the expression stability of five candidate genes [thymidylate synthase (thyA), DNA gyrase subunit B (gyrB), DNA-directed RNA polymerase subunit beta, glyceraldehyde-3-phosphate dehydrogenase and 16S ribosomal RNA (16S rRNA)] was evaluated using BestKeeper, GeNorm, and NormFinder software programs. Quantitative real-time PCR (qRT-PCR) analysis confirmed that two Xcc effector genes were hrpX/hrpG-regulated in MMXC using selected genes as controls. Finally, gyrB and thyA were validated as the optimized reference genes of Xcc cultured in MMXC, and qRT-PCR analysis was demonstrated to be an efficient alternative to Gus-activity detection for the analysis of Xcc expression. This information will be useful in the future studies of Xcc, especially those seeking new functional genes.


Assuntos
Meios de Cultura/química , Genes Bacterianos , Reação em Cadeia da Polimerase em Tempo Real , Xanthomonas campestris/genética , Proteínas de Bactérias/genética , Técnicas Bacteriológicas , DNA Girase/genética , RNA Polimerases Dirigidas por DNA/genética , RNA Ribossômico 16S/genética , Timidilato Sintase/genética , Xanthomonas campestris/crescimento & desenvolvimento
4.
J Sci Food Agric ; 99(7): 3475-3480, 2019 May.
Artigo em Inglês | MEDLINE | ID: mdl-30623440

RESUMO

BACKGROUND: Seeds harbor different microorganisms on their surfaces that degrade seed quality, thus causing an economic loss. Even though different approaches are available for the disinfection of seed surfaces, there is a need to develop environmentally friendly and sustainable technologies. A bench-scale pulsed electric field (PEF) unit was designed to inactivate microflora of eight seeds after which the resultant vigor of the treated seeds was determined. RESULTS: Significant reductions were obtained in endogenous natural and inoculated pathogenic (Alternaria brassica and Xanthomonas campestris pv. campestris, Drechslera graminea and Fusarium graminearum) microflora of seeds. The survival ratios of total aerobic mesophilic bacteria and of total mold and yeast decreased significantly for winter wheat and barley, parsley, onion, lettuce, tomato, and garden rocket with the PEF treatments of 240 and 960 J. A significant increase in germination ratio was observed for winter wheat and barley, lettuce, and tomato with 960 J. Germination energy increased for parsley with 240 J and for winter wheat and barley, lettuce, tomato, and garden rocket with 960 J. A better root development and seedling were found for winter barley. CONCLUSION: PEFs are a viable option to both disinfect seed surfaces and improve seed vigor. © 2019 Society of Chemical Industry.


Assuntos
Desinfecção/métodos , Sementes/efeitos da radiação , Alternaria/crescimento & desenvolvimento , Alternaria/efeitos da radiação , Desinfecção/instrumentação , Fusarium/crescimento & desenvolvimento , Fusarium/efeitos da radiação , Germinação , Hordeum/crescimento & desenvolvimento , Hordeum/microbiologia , Hordeum/efeitos da radiação , Plântula/crescimento & desenvolvimento , Plântula/microbiologia , Plântula/efeitos da radiação , Sementes/crescimento & desenvolvimento , Sementes/microbiologia , Triticum/crescimento & desenvolvimento , Triticum/microbiologia , Triticum/efeitos da radiação , Xanthomonas campestris/crescimento & desenvolvimento , Xanthomonas campestris/efeitos da radiação
5.
Microbiology (Reading) ; 164(9): 1146-1155, 2018 09.
Artigo em Inglês | MEDLINE | ID: mdl-30024369

RESUMO

The synthesis of methionine is critical for most bacteria. It is known that cellular methionine has a feedback effect on the expression of met genes involved in de novo methionine biosynthesis. Previous studies revealed that Gram-negative bacteria control met gene expression at the transcriptional level by regulator proteins, while most Gram-positive bacteria regulate met genes at post-transcriptional level by RNA regulators (riboregulators) located in the 5'UTR of met genes. However, despite its importance, the methionine biosynthesis pathway in the Gram-negative Xanthomonas genus that includes many important plant pathogens is completely uncharacterized. Here, we address this issue using the crucifer black rot pathogen Xanthomonas campestris pv. campestris (Xcc), a model bacterium in microbe-plant interaction studies. The work identified an operon (met) involved in de novo methionine biosynthesis in Xcc. Disruption of the operon resulted in defective growth in methionine-limited media and in planta. Western blot analysis revealed that the expression of the operon is dependent on methionine levels. Further molecular analyses demonstrated that the 5'UTR, but not the promoter of the operon, is involved in feedback regulation on operon expression in response to methionine availability, providing an example of a Gram-negative bacterium utilizing a 5'UTR region to control the expression of the genes involved in methionine biosynthesis.


Assuntos
Regiões 5' não Traduzidas , Retroalimentação Fisiológica , Regulação Bacteriana da Expressão Gênica , Metionina/biossíntese , Xanthomonas campestris/metabolismo , Deleção de Genes , Perfilação da Expressão Gênica , Óperon , Xanthomonas campestris/genética , Xanthomonas campestris/crescimento & desenvolvimento
6.
Appl Microbiol Biotechnol ; 102(15): 6613-6625, 2018 Aug.
Artigo em Inglês | MEDLINE | ID: mdl-29858955

RESUMO

The ɣ-proteobacterium Xanthomonas campestris pv. campestris (Xcc) is the producer of the biopolymer xanthan, a polysaccharide which is used as a thickener in numerous industrial applications. In this study, we present a global transcriptome profiling of two Xcc strain B100 cultures obtained from fermentation during the growth phase and the subsequent stationary phase associated with xanthan biosynthesis. During the xanthan production phase, highly abundant transcripts belonged to genes encoding for small RNAs, glycogen biosynthesis, and xanthan export. A total of 1850 (40%) genes were differentially transcribed during the stationary phase where 924 were transcriptionally up-regulated and 926 genes were down-regulated. An overview of differentially transcribed genes includes a significant down-regulation of genes involved in transcription, translation, and amino acid biosynthesis pathways. A group of up-regulated genes was involved in cellular response against oxidative stress, such as those coding for superoxide dismutase and catalase. Genes encoding enzymes involved in nucleotide sugar precursor synthesis of xanthan biosynthesis, such as xanA, galU, and ugd, exhibited a transcription pattern that did not change during the growth and stationary phase. Regarding the transcription pattern of the gum gene cluster that govern xanthan biosynthesis, a significant up-regulation of the genes gumB, gumC, and gumD was observed, while the transcript pools of the genes gumG, gumH, gumI, and gumJ were reduced and those of genes gumE, gumF, gumK, gumL, and gumM remained un-changed during the stationary phase compared to the growth phase. The obtained data represents the first analysis of gene expression patterns under xanthan production conditions and provides the bases for future studies aiming at enhancing xanthan yield.


Assuntos
Proteínas de Bactérias/genética , Fermentação , Regulação Bacteriana da Expressão Gênica , Xanthomonas campestris/crescimento & desenvolvimento , Xanthomonas campestris/genética , Perfilação da Expressão Gênica , Polissacarídeos Bacterianos/genética
7.
Prep Biochem Biotechnol ; 48(10): 940-945, 2018.
Artigo em Inglês | MEDLINE | ID: mdl-30388919

RESUMO

This work aims to enhance the bioproduction of xanthan gum by screening a hyper-yield producer from the wild-type Xanthomonas campestris during a long-term continuous subculture. We reported a cell-wall deficient mutant, which performed a shift of cell morphology from rod-shaped to round-shaped. Both the yield of xanthan gum and the conversion rate of feedstock were assessed using sucrose as a carbon source with the supplement of yeast extract powder, l-glutamic acid, and other raw materials. After 96 h aerobic fermentation, the yield of xanthan gum of the mutant reached up to 32 g/L, which was 3.4 times of that of the wild-type strain. The conversion rate of feedstock in the mutant was up to 92.1%, which was 3 times of that of the wild-type (31.2%). Furthermore, pigments generated were determined and compared. As a result, the fermentation broth of the wild-type performed an OD560nm of 0.296, which was 5.8 times of that (OD560nm = 0.051) of the mutant. Microscopy analysis showed that the percentage of free-living cells in broth affected the color of the final product. Moreover, the robustness of the fermentation performance of the cell-wall deficient mutant at a pilot scale showed potential for industrial application.


Assuntos
Parede Celular/genética , Mutação , Polissacarídeos Bacterianos/biossíntese , Xanthomonas campestris , Xanthomonas campestris/genética , Xanthomonas campestris/crescimento & desenvolvimento
8.
BMC Microbiol ; 17(1): 142, 2017 06 27.
Artigo em Inglês | MEDLINE | ID: mdl-28655353

RESUMO

BACKGROUND: The phytopathogenic Xanthomonas campestris pv.campestris is a gram-negative bacterium and the causal agent of black-rot disease of cruciferous crops. Many gram-negative bacteria possess a family of proteins, called Dsbs, which are involved in disulfide bond formation in certain periplasmic proteins. In our preliminary screening of the virulence to the plants we identified that gene XC_0531 which annotated gene dsbD of Xanthomonas campestris pv. campestris (Xcc) is related to the virulence to the host plants. RESULTS: Here, we found XC_0531 encoded a DsbD like protein. Its deletion is sensitive to DTT and copper, decreased accumulation of free thiols in periplasm. Its deletion also affected heme synthesis, position of Soret band and the production of peak c550. This suggests that XC_0531 is related to c-type cytochromes biogenesis. XC_0531 mutation decreased the utilization of different carbon sources (such as galactose, xylose, maltose, saccharose and glucose), reduced extracellular polysaccharide (EPS) production, decreased extracellular enzyme activities (protease, cellulose and amylase), slowed down growth rate of Xcc and weakened virulence to the plants. These results suggest that these phenotypes caused by XC_0531 mutation is possibly due to deficient biosynthesis of c-type cytochromes in respiration chain and the formation of disulfide bonds. Our work confirmed the function of XC_0531 and provide theory basis for scientists working on molecular mechanisms of cytochrome c biogenesis, pathogenesis of Xcc, development of EPS commercial values and protecting plant from black rot. CONCLUSION: We confirmed the function of gene XC_0531, which encodes a DsbD like protein, a protein correlated with c-type cytochrome biogenesis. This gene is related to the virulence to plants by affecting funtion of cytochromes c and probably disulfide bonds modification of proteins in type II secretion system (T2SS).


Assuntos
Citocromos c/biossíntese , Oxirredutases/genética , Raphanus/microbiologia , Xanthomonas campestris/patogenicidade , Proteínas de Bactérias/genética , Carbono/metabolismo , Dissulfetos/metabolismo , Regulação Bacteriana da Expressão Gênica , Regulação Enzimológica da Expressão Gênica , Mutação , Virulência , Xanthomonas campestris/genética , Xanthomonas campestris/crescimento & desenvolvimento
9.
Prep Biochem Biotechnol ; 47(5): 468-472, 2017 May 28.
Artigo em Inglês | MEDLINE | ID: mdl-28267413

RESUMO

The superior properties of xanthan gum make it an industrial aginomoto used in many industries, especially in oil recovery. In the present work, xanthan production from glycerol by a mutant strain Xanthomonas campestris WXLB-006 reached as high as 17.8 g/L in flask culture. With the adoption of pH control, varied aeration and agitation, and varied glycerol feeding strategy, xanthan production reached 33.9 g/L in a 7-L fermenter and fermentation time decreased to 60 hr. Instead of difficultly and costly purifying glycerol, this research provides a very good case for glycerol utilization. At the same time, this is the first report on a high glycerol-tolerant strain for microbial polysaccharide production and 33.9 g/L is the highest production of xanthan gum produced from glycerol so far.


Assuntos
Glicerol/metabolismo , Microbiologia Industrial/métodos , Polissacarídeos Bacterianos/metabolismo , Xanthomonas campestris/metabolismo , Fermentação , Concentração de Íons de Hidrogênio , Mutação , Xanthomonas campestris/genética , Xanthomonas campestris/crescimento & desenvolvimento
10.
Mol Plant Microbe Interact ; 29(9): 688-699, 2016 09.
Artigo em Inglês | MEDLINE | ID: mdl-27464764

RESUMO

Xanthan, the main exopolysaccharide (EPS) synthesized by Xanthomonas spp., contributes to bacterial stress tolerance and enhances attachment to plant surfaces by helping in biofilm formation. Therefore, xanthan is essential for successful colonization and growth in planta and has also been proposed to be involved in the promotion of pathogenesis by calcium ion chelation and, hence, in the suppression of the plant defense responses in which this cation acts as a signal. The aim of this work was to study the relationship between xanthan structure and its role as a virulence factor. We analyzed four Xanthomonas campestris pv. campestris mutants that synthesize structural variants of xanthan. We found that the lack of acetyl groups that decorate the internal mannose residues, ketal-pyruvate groups, and external mannose residues affects bacterial adhesion and biofilm architecture. In addition, the mutants that synthesized EPS without pyruvilation or without the external mannose residues did not develop disease symptoms in Arabidopsis thaliana. We also observed that the presence of the external mannose residues and, hence, pyruvilation is required for xanthan to suppress callose deposition as well as to interfere with stomatal defense. In conclusion, pyruvilation of xanthan seems to be essential for Xanthomonas campestris pv. campestris virulence.


Assuntos
Arabidopsis/microbiologia , Biofilmes/crescimento & desenvolvimento , Glucanos/metabolismo , Doenças das Plantas/microbiologia , Polissacarídeos Bacterianos/química , Xanthomonas campestris/patogenicidade , Interações Hospedeiro-Patógeno , Mutação , Folhas de Planta/microbiologia , Estômatos de Plantas/microbiologia , Polissacarídeos Bacterianos/genética , Polissacarídeos Bacterianos/metabolismo , Ácido Pirúvico/química , Virulência , Fatores de Virulência/química , Fatores de Virulência/genética , Fatores de Virulência/metabolismo , Xanthomonas campestris/genética , Xanthomonas campestris/crescimento & desenvolvimento , Xanthomonas campestris/fisiologia
11.
BMC Microbiol ; 16: 93, 2016 May 23.
Artigo em Inglês | MEDLINE | ID: mdl-27215401

RESUMO

BACKGROUND: The exopolysaccharide xanthan is a natural product which is extensively used in industry. It is a thickening agent in many fields, from oil recovery to the food sector. Xanthan is produced by the Gram negative bacterium Xanthomonas campestris pv. campestris (Xcc). We analyzed the lipopolysaccharide (LPS) of three mutant strains of the Xcc wild type B100 to distinguish if the xanthan production can be increased when LPS biosynthesis is affected. RESULTS: The Xcc B100 O-antigen (OA) is composed of a linear main chain of rhamnose residues with N-acetylfucosamine (FucNAc) side branches at every second rhamnose. It is the major LPS constituent. The O-antigen was missing completely in the mutant strain H21012 (deficient in wxcB), since neither rhamnose nor FucNAc could be detected as part of the LPS by MALDI-TOF-MS, and only a slight amount of rhamnose and no FucNAc was found by GC analysis. The LPS of two other mutants was analyzed, Xcc H28110 (deficient in wxcK) and H20110 (wxcN). In both of them no FucNAc could be detected in the LPS fraction, while the rhamnose moieties were more abundant than in wild type LPS. The measurements were carried out by GC and confirmed by MALDI-TOF-MS analyses that indicated an altered OA in which the branches are missing, while the rhamnan main chain seemed longer than in the wild type. Quantification of xanthan confirmed our hypothesis that a missing OA can lead to an increased production of the extracellular polysaccharide. About 6.3 g xanthan per g biomass were produced by the Xcc mutant H21012 (wxcB), as compared to the wild type production of approximately 5 g xanthan per g biomass. In the two mutant strains with modified OA however, Xcc H28110 (wxcK) and Xcc H20110 (wxcN), the xanthan production of 5.5 g and 5.3 g, respectively, was not significantly increased. CONCLUSIONS: Mutations affecting LPS biosynthesis can be beneficial for the production of the extracellular polysaccharide xanthan. However, only complete inhibition of the OA resulted in increased xanthan production. The inhibition of the FucNAc side branches did not lead to increased production, but provoked a novel LPS phenotype. The data suggests an elongation of the linear rhamnan main chain of the LPS OA in both the Xcc H28110 (wxcK) and Xcc H20110 (wxcN) mutant strains.


Assuntos
Antígenos O/genética , Polissacarídeos Bacterianos/biossíntese , Xanthomonas campestris/crescimento & desenvolvimento , Proteínas de Bactérias/genética , Proteínas de Bactérias/metabolismo , Mutação , Antígenos O/metabolismo , Espectrometria de Massas por Ionização e Dessorção a Laser Assistida por Matriz/métodos , Xanthomonas campestris/genética
12.
Mol Microbiol ; 93(2): 262-75, 2014 Jul.
Artigo em Inglês | MEDLINE | ID: mdl-24866092

RESUMO

In Xanthomonas campestris pv. campestris (Xcc), the proteins encoded by the rpf (regulator of pathogenicity factor) gene cluster produce and sense a fatty acid signal molecule called diffusible signalling factor (DSF, 2(Z)-11-methyldodecenoic acid). RpfB was reported to be involved in DSF processing and was predicted to encode an acyl-CoA ligase. We report that RpfB activates a wide range of fatty acids to their CoA esters in vitro. Moreover, RpfB can functionally replace the paradigm bacterial acyl-CoA ligase, Escherichia coli FadD, in the E. coli ß-oxidation pathway and deletion of RpfB from the Xcc genome results in a strain unable to utilize fatty acids as carbon sources. An essential RpfB function in the pathogenicity factor pathway was demonstrated by the properties of a strain deleted for both the rpfB and rpfC genes. The ΔrpfB ΔrpfC strain grew poorly and lysed upon entering stationary phase. Deletion of rpfF, the gene encoding the DSF synthetic enzyme, restored normal growth to this strain. RpfF is a dual function enzyme that synthesizes DSF by dehydration of a 3-hydroxyacyl-acyl carrier protein (ACP) fatty acid synthetic intermediate and also cleaves the thioester bond linking DSF to ACP. However, the RpfF thioesterase activity is of broad specificity and upon elimination of its RpfC inhibitor RpfF attains maximal activity and its thioesterase activity proceeds to block membrane lipid synthesis by cleavage of acyl-ACP intermediates. This resulted in release of the nascent acyl chains to the medium as free fatty acids. This lack of acyl chains for phospholipid synthesis results in cell lysis unless RpfB is present to counteract the RpfF thioesterase activity by catalysing uptake and activation of the free fatty acids to give acyl-CoAs that can be utilized to restore membrane lipid synthesis. Heterologous expression of a different fatty acid activating enzyme, the Vibrio harveyi acyl-ACP synthetase, replaced RpfB in counteracting the effects of high level RpfF thioesterase activity indicating that the essential role of RpfB is uptake and activation of free fatty acids.


Assuntos
Coenzima A Ligases/metabolismo , Ácidos Graxos/metabolismo , Xanthomonas campestris/enzimologia , Acil Coenzima A/metabolismo , Proteínas de Bactérias/metabolismo , Carbono-Enxofre Ligases/metabolismo , Coenzima A Ligases/genética , Coenzima A Ligases/isolamento & purificação , Difusão , Escherichia coli/genética , Escherichia coli/crescimento & desenvolvimento , Proteínas de Escherichia coli/metabolismo , Regulação Bacteriana da Expressão Gênica , Genes Bacterianos , Teste de Complementação Genética , Enzimas Multifuncionais/metabolismo , Família Multigênica , Mutação , Oxirredução , Doenças das Plantas/microbiologia , Transdução de Sinais/genética , Especificidade por Substrato , Tioléster Hidrolases/metabolismo , Xanthomonas campestris/genética , Xanthomonas campestris/crescimento & desenvolvimento , Xanthomonas campestris/patogenicidade
13.
Mikrobiol Z ; 77(6): 47-54, 2015.
Artigo em Russo | MEDLINE | ID: mdl-26829839

RESUMO

Antagonistic activity 100 strains of Bacillus bacteria towards to museum and actual strains of phytopathogenic bacteria and fungy was defined. Relation between level of antagonistic activity to phytopathogenic bacteria and genus accessory of the last was shown. The medium level of antagonism to fungal phytopathogens at 30% of the studied strains of Bacillus bacteria was shown. 5 strains of Bacillus sp. with high and medium levels of antagonism to phytopathogens bacterial and fungy nature was selected and considered as perspective for creation of biological preparations for plant protection.


Assuntos
Antibiose , Bacillus/patogenicidade , Agrobacterium tumefaciens/crescimento & desenvolvimento , Bacillus/fisiologia , Contagem de Colônia Microbiana , Fusarium/crescimento & desenvolvimento , Pectobacterium carotovorum/crescimento & desenvolvimento , Pseudomonas fluorescens/crescimento & desenvolvimento , Pseudomonas syringae/crescimento & desenvolvimento , Xanthomonas campestris/crescimento & desenvolvimento
14.
World J Microbiol Biotechnol ; 30(1): 271-80, 2014 Jan.
Artigo em Inglês | MEDLINE | ID: mdl-23913026

RESUMO

In this study, actinomycetes from roots and rhizospheric soils of leguminous plants were isolated using starch casein agar supplemented with antifungal and antibacterial antibiotics. Three hundred and seventeen actinomycetes were isolated with 77 isolates obtained from plant roots and 240 isolates from rhizospheric soils. Analysis of whole-organism hydrolysates showed that 289 strains were rich in the LL-isomer of diaminopimelic acid, a result consistent with their assignment to the streptomycetes. The remaining 28 strains were assigned to non-streptomycetes based on the presence of meso-isomer of diaminopimelic acid in cell wall. Sixty-four isolates (20.2%) showed antagonistic activity against soybean pathogen Xanthomonas campestris pv. glycine by agar overlay method. Isolate RM 365 showed the highest activity with an inhibition ratio of 3.79, with no inhibitory activity on the growth of Rhizobium japonicum TISTR 079, Rhizobium sp. TISTR 061 and Rhizobium sp. TISTR 063. The 16S rRNA gene sequence analysis revealed that isolate RM 365 shared 99.28% similarity to Streptomyces caeruleatus GIMN4(T) (GQ329712). In addition, isolates which contained meso-DAP were also identified by 16S rRNA gene sequence analysis. The results showed that they were members of the genus Amycolatopsis, Isoptericola, Micromonospora, Microbispora, Nocardia, Nonomuraea, Promicromonospora and Pseudonocardia.


Assuntos
Actinobacteria/isolamento & purificação , Actinobacteria/fisiologia , Antibiose , Glycine max/microbiologia , Xanthomonas campestris/crescimento & desenvolvimento , Actinobacteria/química , Actinobacteria/classificação , Análise por Conglomerados , DNA Bacteriano/química , DNA Bacteriano/genética , DNA Ribossômico/química , DNA Ribossômico/genética , Ácido Diaminopimélico/análise , Dados de Sequência Molecular , Filogenia , Raízes de Plantas/microbiologia , RNA Ribossômico 16S/genética , Análise de Sequência de DNA , Microbiologia do Solo
15.
New Phytol ; 198(3): 899-915, 2013 May.
Artigo em Inglês | MEDLINE | ID: mdl-23442088

RESUMO

Xylan is a major structural component of plant cell wall and the second most abundant plant polysaccharide in nature. Here, by combining genomic and functional analyses, we provide a comprehensive picture of xylan utilization by Xanthomonas campestris pv campestris (Xcc) and highlight its role in the adaptation of this epiphytic phytopathogen to the phyllosphere. The xylanolytic activity of Xcc depends on xylan-deconstruction enzymes but also on transporters, including two TonB-dependent outer membrane transporters (TBDTs) which belong to operons necessary for efficient growth in the presence of xylo-oligosaccharides and for optimal survival on plant leaves. Genes of this xylan utilization system are specifically induced by xylo-oligosaccharides and repressed by a LacI-family regulator named XylR. Part of the xylanolytic machinery of Xcc, including TBDT genes, displays a high degree of conservation with the xylose-regulon of the oligotrophic aquatic bacterium Caulobacter crescentus. Moreover, it shares common features, including the presence of TBDTs, with the xylan utilization systems of Bacteroides ovatus and Prevotella bryantii, two gut symbionts. These similarities and our results support an important role for TBDTs and xylan utilization systems for bacterial adaptation in the phyllosphere, oligotrophic environments and animal guts.


Assuntos
Proteínas da Membrana Bacteriana Externa/genética , Regulação Bacteriana da Expressão Gênica , Xanthomonas campestris/genética , Xanthomonas campestris/metabolismo , Xilanos/metabolismo , Adaptação Fisiológica , Animais , Proteínas da Membrana Bacteriana Externa/metabolismo , Bacteroides/metabolismo , Brassica/microbiologia , Caulobacter crescentus/metabolismo , Proteínas de Membrana Transportadoras/genética , Proteínas de Membrana Transportadoras/metabolismo , Mutação , Oligossacarídeos/química , Oligossacarídeos/metabolismo , Óperon , Phaseolus/microbiologia , Simbiose , Xanthomonas campestris/crescimento & desenvolvimento , Xanthomonas campestris/patogenicidade , Xilose/metabolismo , Xilosidases/genética , Xilosidases/metabolismo
16.
Bioprocess Biosyst Eng ; 36(7): 911-25, 2013 Jul.
Artigo em Inglês | MEDLINE | ID: mdl-23010723

RESUMO

The specific growth and the xanthan production rates by the bacterium Xanthomonas campestris under different shear levels in shake flasks and in a stirred and sparged tank bioreactor have been studied. The shake flask has been used as a reference for studying the shear effects. An effectiveness factor expressed by the ratio of the observed growth rate and the growth rate without oxygen limitation or cell damage was calculated in both modes of cultures. It was observed that the effectiveness factor was strongly dependent on the operational conditions. A strong oxygen transfer limitation at low stirring rates, indicated by a 54 % decrease in the effectiveness factor was observed. In contrast, at higher stirrer speed, cell damage was caused by hydrodynamic stress in the turbulent bulk of the broth, yielding again a decrease in the effectiveness factor values for stirrer speeds higher than 500 rpm. Cell morphological changes were also observed depending on the agitation conditions, differences in morphology being evident at high shear stress.


Assuntos
Reatores Biológicos , Hidrodinâmica , Xanthomonas campestris/metabolismo , Aerobiose , Modelos Teóricos , Oxigênio/metabolismo , Xanthomonas campestris/crescimento & desenvolvimento
17.
Prikl Biokhim Mikrobiol ; 49(4): 364-71, 2013.
Artigo em Russo | MEDLINE | ID: mdl-24455862

RESUMO

The effect of surface-active substances (SAS's) of Acinetobacter calcoaceticus IMV B-7241, Rhodococcus erythropolis IMV Ac-5017, and Nocardia vaccinii K-8 on phytopathogenic bacteria has been studied. It was shown that the survival of cells (10(5)-10(7) in a milliliter) of the Pseudomonas and Xanthomonas phytopathogenic bacteria was found to be 0-33% after treatment with SAS preparations of the IMV Ac-5017 and IMV B-7241 strains for 2 h (0.15-0.4 mg/mL). In the presence of N. vaccinii K-8 SAS preparations (0.085-0.85 mg/mL), the number of cells of the majority of the studied phytopathogenic bacteria decreased by 95-100%. These data show prospects for using microbial SAS's for the construction of ecologically friendly drugs for regulating the number of phytopathogenic bacteria.


Assuntos
Acinetobacter calcoaceticus/metabolismo , Antibacterianos/farmacologia , Nocardia/metabolismo , Rhodococcus/metabolismo , Tensoativos/farmacologia , Acinetobacter calcoaceticus/química , Acinetobacter calcoaceticus/crescimento & desenvolvimento , Antibacterianos/isolamento & purificação , Meios de Cultura , Testes de Sensibilidade Microbiana , Nocardia/química , Nocardia/crescimento & desenvolvimento , Pectobacterium carotovorum/efeitos dos fármacos , Pectobacterium carotovorum/crescimento & desenvolvimento , Doenças das Plantas/microbiologia , Doenças das Plantas/terapia , Pseudomonas syringae/efeitos dos fármacos , Pseudomonas syringae/crescimento & desenvolvimento , Rhodococcus/química , Rhodococcus/crescimento & desenvolvimento , Tensoativos/isolamento & purificação , Xanthomonas campestris/efeitos dos fármacos , Xanthomonas campestris/crescimento & desenvolvimento
18.
World J Microbiol Biotechnol ; 28(8): 2759-64, 2012 Aug.
Artigo em Inglês | MEDLINE | ID: mdl-22806202

RESUMO

Xanthan gum is a polysaccharide that is widely used as stabilizer and thickener with many industrial applications in food industry. Our aim was to estimate the ability of Xanthomonas campestris ATCC 13951 for the production of xanthan gum by using whey as a growth medium, a by-product of dairy industry. X. campestris ATCC 13951 has been studied in batch cultures using a complex medium for the determination of the optimal concentration of glucose, galactose and lactose. In addition, whey was used under various treatment procedures (de-proteinated, partially hydrolyzed by ß-lactamase and partially hydrolyzed and de-proteinated) as culture medium, to study the production of xanthan in a 2 l bioreactor with constant stirring and aeration. A production of 28 g/l was obtained when partially hydrolysed ß-lactamase was used, which proved to be one of the highest xanthan gum production reported so far. At the same time, an effort has been made for the control and selection of the most appropriate procedure for the preservation of the strain and its use as inoculant in batch cultures, without loss of its viability and its capability of xanthan gum production. The pre-treatment of whey (whey permeate medium hydrolyzed, WPH) was very important for the production of xanthan by the strain X. campestris ATCC 13951 during batch culture conditions in a 2 l bioreactor. Preservation methods such as lyophilization, cryopreservation at various glycerol solution and temperatures have been examined. The results indicated that the best preservation method for the producing strain X. campestris ATCC 13951 was the lyophilization. Taking into account that whey permeate is a low cost by-product of the dairy industry, the production of xanthan achieved under the studied conditions was considered very promising for industrial application.


Assuntos
Polissacarídeos Bacterianos/biossíntese , Xanthomonas campestris/metabolismo , Reatores Biológicos , Meios de Cultura , Tecnologia de Alimentos , Cinética , Proteínas do Leite , Proteínas do Soro do Leite , Xanthomonas campestris/crescimento & desenvolvimento
19.
J Inorg Biochem ; 227: 111693, 2022 02.
Artigo em Inglês | MEDLINE | ID: mdl-34915237

RESUMO

The interaction of Mn+2 with substituted salicylaldehydes (X-saloH) led to the formation of five manganese(II) complexes formulated as [Μn(X-salo)2(MeOH)2]. When the reactions took place in the presence of an α-diimine such as 2,2'-bipyridine, 1,10-phenanthroline or 2,2'-bipyridylamine, five manganese(II) complexes of the formula [Mn(X-salo)2(α-diimine)] were isolated. The characterization of the complexes was accomplished by various spectroscopic techniques and single-crystal X-ray crystallography. The antioxidant activity of the compounds was evaluated via the scavenging of 1,1-diphenyl-picrylhydrazyl, 2,2'-azinobis(3-ethylbenzothiazoline-6-sulfonic acid) and hydroxyl free radicals. The antibacterial activity of the complexes was tested in vitro against Staphylococcus aureus and Xanthomonas campestris bacterial strains and was found moderate. Diverse techniques were employed to examine the interaction of the complexes with calf-thymus DNA which showed intercalation as the most possible interaction mode. The affinity of the complexes for bovine serum albumin was investigated by fluorescence emission spectroscopy and the binding constants were determined.


Assuntos
Aldeídos/química , Antibacterianos , Complexos de Coordenação , Manganês/química , Staphylococcus aureus/crescimento & desenvolvimento , Xanthomonas campestris/crescimento & desenvolvimento , Antibacterianos/síntese química , Antibacterianos/química , Antibacterianos/farmacologia , Complexos de Coordenação/síntese química , Complexos de Coordenação/química , Complexos de Coordenação/farmacologia
20.
Mol Plant Microbe Interact ; 24(12): 1540-52, 2011 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-22066902

RESUMO

The antibacterial potential of four strains of Bacillus subtilis, UMAF6614, UMAF6619, UMAF6639, and UMAF8561, previously selected on the basis of their antifungal activity and efficacy against cucurbit powdery mildew, was examined. Among these strains, UMAF6614 and UMAF6639 showed the highest antibacterial activity in vitro, especially against Xanthomonas campestris pv. cucurbitae and Pectobacterium carotovorum subsp. carotovorum. These strains produced the three families of lipopeptide antibiotics known in Bacillus spp.: surfactins, iturins, and fengycins. Using thin-layer chromatography analysis and direct bioautography, the antibacterial activity could be associated with iturin lipopeptides. This result was confirmed by mutagenesis analysis using lipopeptide-defective mutants. The antibacterial activity was practically abolished in iturin-deficient mutants, whereas the fengycin mutants retained certain inhibitory capabilities. Analyses by fluorescence and transmission electron microscopy revealed the cytotoxic effect of these compounds at the bacterial plasma membrane level. Finally, biological control assays on detached melon leaves demonstrated the ability of UMAF6614 and UMAF6639 to suppress bacterial leaf spot and soft rot; accordingly, the biocontrol activity was practically abolished in mutants deficient in iturin biosynthesis. Taken together, our results highlight the potential of these B. subtilis strains as biocontrol agents against fungal and bacterial diseases of cucurbits and the versatility of iturins as antifungal and antibacterial compounds.


Assuntos
Anti-Infecciosos/farmacologia , Bacillus subtilis/química , Cucurbitaceae/microbiologia , Lipopeptídeos/farmacologia , Pectobacterium carotovorum/efeitos dos fármacos , Xanthomonas campestris/efeitos dos fármacos , Anti-Infecciosos/isolamento & purificação , Antibiose , Bacillus subtilis/metabolismo , Bacillus subtilis/fisiologia , Proteínas de Bactérias/isolamento & purificação , Proteínas de Bactérias/farmacologia , Lipopeptídeos/isolamento & purificação , Viabilidade Microbiana , Mutação , Pectobacterium carotovorum/crescimento & desenvolvimento , Peptídeos Cíclicos/isolamento & purificação , Peptídeos Cíclicos/farmacologia , Controle Biológico de Vetores , Doenças das Plantas/microbiologia , Doenças das Plantas/prevenção & controle , Folhas de Planta/microbiologia , Xanthomonas campestris/crescimento & desenvolvimento , Xanthomonas campestris/ultraestrutura
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