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Construction of a genetic AND gate under a new standard for assembly of genetic parts.
Ayukawa, Shotaro; Kobayashi, Akio; Nakashima, Yusaku; Takagi, Hidemasa; Hamada, Shogo; Uchiyama, Masahiko; Yugi, Katsuyuki; Murata, Satoshi; Sakakibara, Yasubumi; Hagiya, Masami; Yamamura, Masayuki; Kiga, Daisuke.
Afiliación
  • Ayukawa S; Department of Computational Intelligence and Systems Science, Interdisciplinary Graduate School of Science and Engineering, Tokyo Institute of Technology, Midori-ku, Yokohama, Kanagawa, Japan. ayukawa@sb.dis.titech.ac.jp
BMC Genomics ; 11 Suppl 4: S16, 2010 Dec 02.
Article en En | MEDLINE | ID: mdl-21143799
ABSTRACT

BACKGROUND:

Appropriate regulation of respective gene expressions is a bottleneck for the realization of artificial biological systems inside living cells. The modification of several promoter sequences is required to achieve appropriate regulation of the systems. However, a time-consuming process is required for the insertion of an operator, a binding site of a protein for gene expression, to the gene regulatory region of a plasmid. Thus, a standardized method for integrating operator sequences to the regulatory region of a plasmid is required.

RESULTS:

We developed a standardized method for integrating operator sequences to the regulatory region of a plasmid and constructed a synthetic promoter that functions as a genetic AND gate. By standardizing the regulatory region of a plasmid and the operator parts, we established a platform for modular assembly of the operator parts. Moreover, by assembling two different operator parts on the regulatory region, we constructed a regulatory device with an AND gate function.

CONCLUSIONS:

We implemented a new standard to assemble operator parts for construction of functional genetic logic gates. The logic gates at the molecular scale have important implications for reprogramming cellular behavior.
Asunto(s)

Texto completo: 1 Colección: 01-internacional Banco de datos: MEDLINE Asunto principal: Plásmidos / Secuencias Reguladoras de Ácidos Nucleicos / Biología Computacional Idioma: En Revista: BMC Genomics Asunto de la revista: GENETICA Año: 2010 Tipo del documento: Article País de afiliación: Japón

Texto completo: 1 Colección: 01-internacional Banco de datos: MEDLINE Asunto principal: Plásmidos / Secuencias Reguladoras de Ácidos Nucleicos / Biología Computacional Idioma: En Revista: BMC Genomics Asunto de la revista: GENETICA Año: 2010 Tipo del documento: Article País de afiliación: Japón