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CcpNmr AnalysisAssign: a flexible platform for integrated NMR analysis.
Skinner, Simon P; Fogh, Rasmus H; Boucher, Wayne; Ragan, Timothy J; Mureddu, Luca G; Vuister, Geerten W.
Afiliación
  • Skinner SP; Department of Molecular and Cell Biology, Leicester Institute for Structural- and Chemical Biology, University of Leicester, Leicester, UK.
  • Fogh RH; Department of Molecular and Cell Biology, Leicester Institute for Structural- and Chemical Biology, University of Leicester, Leicester, UK.
  • Boucher W; Department of Biochemistry, University of Cambridge, Cambridge, UK.
  • Ragan TJ; Department of Molecular and Cell Biology, Leicester Institute for Structural- and Chemical Biology, University of Leicester, Leicester, UK.
  • Mureddu LG; Department of Molecular and Cell Biology, Leicester Institute for Structural- and Chemical Biology, University of Leicester, Leicester, UK.
  • Vuister GW; Department of Molecular and Cell Biology, Leicester Institute for Structural- and Chemical Biology, University of Leicester, Leicester, UK. gv29@le.ac.uk.
J Biomol NMR ; 66(2): 111-124, 2016 10.
Article en En | MEDLINE | ID: mdl-27663422
ABSTRACT
NMR spectroscopy is an indispensably powerful technique for the analysis of biomolecules under ambient conditions, both for structural- and functional studies. However, in practice the complexity of the technique has often frustrated its application by non-specialists. In this paper, we present CcpNmr version-3, the latest software release from the Collaborative Computational Project for NMR, for all aspects of NMR data analysis, including liquid- and solid-state NMR data. This software has been designed to be simple, functional and flexible, and aims to ensure that routine tasks can be performed in a straightforward manner. We have designed the software according to modern software engineering principles and leveraged the capabilities of modern graphics libraries to simplify a variety of data analysis tasks. We describe the process of backbone assignment as an example of the flexibility and simplicity of implementing workflows, as well as the toolkit used to create the necessary graphics for this workflow. The package can be downloaded from www.ccpn.ac.uk/v3-software/downloads and is freely available to all non-profit organisations.
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Texto completo: 1 Colección: 01-internacional Banco de datos: MEDLINE Asunto principal: Programas Informáticos / Estadística como Asunto / Resonancia Magnética Nuclear Biomolecular Idioma: En Revista: J Biomol NMR Asunto de la revista: BIOLOGIA MOLECULAR / DIAGNOSTICO POR IMAGEM / MEDICINA NUCLEAR Año: 2016 Tipo del documento: Article País de afiliación: Reino Unido

Texto completo: 1 Colección: 01-internacional Banco de datos: MEDLINE Asunto principal: Programas Informáticos / Estadística como Asunto / Resonancia Magnética Nuclear Biomolecular Idioma: En Revista: J Biomol NMR Asunto de la revista: BIOLOGIA MOLECULAR / DIAGNOSTICO POR IMAGEM / MEDICINA NUCLEAR Año: 2016 Tipo del documento: Article País de afiliación: Reino Unido