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RNA-Puzzles Round III: 3D RNA structure prediction of five riboswitches and one ribozyme.
Miao, Zhichao; Adamiak, Ryszard W; Antczak, Maciej; Batey, Robert T; Becka, Alexander J; Biesiada, Marcin; Boniecki, Michal J; Bujnicki, Janusz M; Chen, Shi-Jie; Cheng, Clarence Yu; Chou, Fang-Chieh; Ferré-D'Amaré, Adrian R; Das, Rhiju; Dawson, Wayne K; Ding, Feng; Dokholyan, Nikolay V; Dunin-Horkawicz, Stanislaw; Geniesse, Caleb; Kappel, Kalli; Kladwang, Wipapat; Krokhotin, Andrey; Lach, Grzegorz E; Major, François; Mann, Thomas H; Magnus, Marcin; Pachulska-Wieczorek, Katarzyna; Patel, Dinshaw J; Piccirilli, Joseph A; Popenda, Mariusz; Purzycka, Katarzyna J; Ren, Aiming; Rice, Greggory M; Santalucia, John; Sarzynska, Joanna; Szachniuk, Marta; Tandon, Arpit; Trausch, Jeremiah J; Tian, Siqi; Wang, Jian; Weeks, Kevin M; Williams, Benfeard; Xiao, Yi; Xu, Xiaojun; Zhang, Dong; Zok, Tomasz; Westhof, Eric.
Afiliación
  • Miao Z; Architecture et Réactivité de l'ARN, Université de Strasbourg, Institut de biologie moléculaire et cellulaire du CNRS, 67000 Strasbourg, France; z.miao@ibmc-cnrs.unistra.fr e.westhof@ibmc-cnrs.unistra.fr.
  • Adamiak RW; Institute of Bioorganic Chemistry, Polish Academy of Sciences, 61-704 Poznan, Poland.
  • Antczak M; Poznan University of Technology, Institute of Computing Science, 60-965 Poznan, Poland.
  • Batey RT; Poznan University of Technology, Institute of Computing Science, 60-965 Poznan, Poland.
  • Becka AJ; Department of Chemistry and Biochemistry, University of Colorado at Boulder, Boulder, Colorado 80309-0596, USA.
  • Biesiada M; Department of Biochemistry, Stanford University School of Medicine, Stanford, California 94305, USA.
  • Boniecki MJ; Institute of Bioorganic Chemistry, Polish Academy of Sciences, 61-704 Poznan, Poland.
  • Bujnicki JM; Laboratory of Bioinformatics and Protein Engineering, International Institute of Molecular and Cell Biology in Warsaw, 02-109 Warsaw, Poland.
  • Chen SJ; Laboratory of Bioinformatics and Protein Engineering, International Institute of Molecular and Cell Biology in Warsaw, 02-109 Warsaw, Poland.
  • Cheng CY; Laboratory of Bioinformatics, Institute of Molecular Biology and Biotechnology, Faculty of Biology, Adam Mickiewicz University, 61-614 Poznan, Poland.
  • Chou FC; Department of Physics and Astronomy, Department of Biochemistry, and Informatics Institute, University of Missouri-Columbia, Columbia, Missouri 65211, USA.
  • Ferré-D'Amaré AR; Department of Biochemistry, Stanford University School of Medicine, Stanford, California 94305, USA.
  • Das R; Department of Biochemistry, Stanford University School of Medicine, Stanford, California 94305, USA.
  • Dawson WK; National Heart, Lung and Blood Institute, Bethesda, Maryland 20892-8012, USA.
  • Ding F; Department of Biochemistry, Stanford University School of Medicine, Stanford, California 94305, USA.
  • Dokholyan NV; Laboratory of Bioinformatics and Protein Engineering, International Institute of Molecular and Cell Biology in Warsaw, 02-109 Warsaw, Poland.
  • Dunin-Horkawicz S; Department of Physics and Astronomy, Clemson University, Clemson, South Carolina 29634, USA.
  • Geniesse C; Department of Biochemistry and Biophysics, University of North Carolina at Chapel Hill, Chapel Hill, North Carolina 27599, USA.
  • Kappel K; Laboratory of Bioinformatics and Protein Engineering, International Institute of Molecular and Cell Biology in Warsaw, 02-109 Warsaw, Poland.
  • Kladwang W; Department of Biochemistry, Stanford University School of Medicine, Stanford, California 94305, USA.
  • Krokhotin A; Department of Biochemistry, Stanford University School of Medicine, Stanford, California 94305, USA.
  • Lach GE; Department of Biochemistry, Stanford University School of Medicine, Stanford, California 94305, USA.
  • Major F; Department of Biochemistry and Biophysics, University of North Carolina at Chapel Hill, Chapel Hill, North Carolina 27599, USA.
  • Mann TH; Laboratory of Bioinformatics and Protein Engineering, International Institute of Molecular and Cell Biology in Warsaw, 02-109 Warsaw, Poland.
  • Magnus M; Institute for Research in Immunology and Cancer (IRIC), Department of Computer Science and Operations Research, Université de Montréal, Montréal, Québec, H3C 3J7, Canada.
  • Pachulska-Wieczorek K; Department of Biochemistry, Stanford University School of Medicine, Stanford, California 94305, USA.
  • Patel DJ; Department of Biochemistry, Stanford University School of Medicine, Stanford, California 94305, USA.
  • Piccirilli JA; Laboratory of Bioinformatics and Protein Engineering, International Institute of Molecular and Cell Biology in Warsaw, 02-109 Warsaw, Poland.
  • Popenda M; Institute of Bioorganic Chemistry, Polish Academy of Sciences, 61-704 Poznan, Poland.
  • Purzycka KJ; Structural Biology Program, Memorial Sloan-Kettering Cancer Center, New York, New York 10065, USA.
  • Ren A; Department of Biochemistry and Molecular Biology, The University of Chicago, Chicago, Illinois 60637, USA.
  • Rice GM; Department of Chemistry, The University of Chicago, Chicago, Illinois 60637, USA.
  • Santalucia J; Institute of Bioorganic Chemistry, Polish Academy of Sciences, 61-704 Poznan, Poland.
  • Sarzynska J; Institute of Bioorganic Chemistry, Polish Academy of Sciences, 61-704 Poznan, Poland.
  • Szachniuk M; Structural Biology Program, Memorial Sloan-Kettering Cancer Center, New York, New York 10065, USA.
  • Tandon A; Life Sciences Institute, Zhejiang University, Hangzhou 310058, China.
  • Trausch JJ; Department of Chemistry, University of North Carolina at Chapel Hill, Chapel Hill, North Carolina 27599-3290, USA.
  • Tian S; Department of Chemistry, Wayne State University, Detroit, Michigan 48202, USA.
  • Wang J; DNA Software, Ann Arbor, Michigan 48104, USA.
  • Weeks KM; Institute of Bioorganic Chemistry, Polish Academy of Sciences, 61-704 Poznan, Poland.
  • Williams B; Institute of Bioorganic Chemistry, Polish Academy of Sciences, 61-704 Poznan, Poland.
  • Xiao Y; Poznan University of Technology, Institute of Computing Science, 60-965 Poznan, Poland.
  • Xu X; Department of Biochemistry and Biophysics, University of North Carolina at Chapel Hill, Chapel Hill, North Carolina 27599, USA.
  • Zhang D; Department of Chemistry and Biochemistry, University of Colorado at Boulder, Boulder, Colorado 80309-0596, USA.
  • Zok T; Department of Biochemistry, Stanford University School of Medicine, Stanford, California 94305, USA.
  • Westhof E; Biomolecular Physics and Modeling Group, School of Physics, Huazhong University of Science and Technology, Wuhan 430074, Hubei, China.
RNA ; 23(5): 655-672, 2017 05.
Article en En | MEDLINE | ID: mdl-28138060
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Texto completo: 1 Colección: 01-internacional Banco de datos: MEDLINE Asunto principal: ARN Catalítico / Riboswitch Tipo de estudio: Prognostic_studies / Risk_factors_studies Idioma: En Revista: RNA Asunto de la revista: BIOLOGIA MOLECULAR Año: 2017 Tipo del documento: Article
Texto completo
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Texto completo: 1 Colección: 01-internacional Banco de datos: MEDLINE Asunto principal: ARN Catalítico / Riboswitch Tipo de estudio: Prognostic_studies / Risk_factors_studies Idioma: En Revista: RNA Asunto de la revista: BIOLOGIA MOLECULAR Año: 2017 Tipo del documento: Article