Your browser doesn't support javascript.
loading
The use of deep learning state-of-the-art architectures for oral epithelial dysplasia grading: A comparative appraisal.
Araújo, Anna Luíza Damaceno; Silva, Viviane Mariano da; Moraes, Matheus Cardoso; de Amorim, Henrique Alves; Fonseca, Felipe Paiva; Sant'Ana, Maria Sissa Pereira; Mesquita, Ricardo Alves; Mariz, Bruno Augusto Linhares Almeida; Pontes, Hélder Antônio Rebelo; de Souza, Lucas Lacerda; Saldivia-Siracusa, Cristina; Khurram, Syed Ali; Pearson, Alexander T; Martins, Manoela Domingues; Lopes, Marcio Ajudarte; Vargas, Pablo Agustin; Kowalski, Luiz Paulo; Santos-Silva, Alan Roger.
Afiliación
  • Araújo ALD; Head and Neck Surgery Department, University of São Paulo Medical School, São Paulo, Brazil.
  • Silva VMD; Oral Diagnosis Department, Piracicaba Dental School, Piracicaba, Brazil.
  • Moraes MC; Institute of Science and Technology, Federal University of São Paulo, São José dos Campos, Brazil.
  • de Amorim HA; Institute of Science and Technology, Federal University of São Paulo, São José dos Campos, Brazil.
  • Fonseca FP; Institute of Science and Technology, Federal University of São Paulo, São José dos Campos, Brazil.
  • Sant'Ana MSP; Department of Oral Surgery and Pathology, School of Dentistry, Federal University of Minas Gerais (UFMG), Belo Horizonte, Brazil.
  • Mesquita RA; Department of Oral Surgery and Pathology, School of Dentistry, Federal University of Minas Gerais (UFMG), Belo Horizonte, Brazil.
  • Mariz BALA; Department of Oral Surgery and Pathology, School of Dentistry, Federal University of Minas Gerais (UFMG), Belo Horizonte, Brazil.
  • Pontes HAR; Serviço de Odontologia, Hospital Vila Nova Star, Rede D'Or, São Paulo, Brazil.
  • de Souza LL; Serviço de Medicina Bucal, Hospital Sírio-Libanês, São Paulo, Brazil.
  • Saldivia-Siracusa C; Service of Oral Pathology, João de Barros Barreto University Hospital, Federal University of Pará, Belém, Brazil.
  • Khurram SA; Oral Diagnosis Department, Piracicaba Dental School, Piracicaba, Brazil.
  • Pearson AT; Service of Oral Pathology, João de Barros Barreto University Hospital, Federal University of Pará, Belém, Brazil.
  • Martins MD; Oral Diagnosis Department, Piracicaba Dental School, Piracicaba, Brazil.
  • Lopes MA; Unit of Oral and Maxillofacial Pathology, School of Clinical Dentistry, University of Sheffield, Sheffield, UK.
  • Vargas PA; Section of Hematology/Oncology, Department of Medicine, University of Chicago, Chicago, Illinois, USA.
  • Kowalski LP; Department of Oral Pathology, School of Dentistry, Federal University of Rio Grande do Sul, Porto Alegre, Brazil.
  • Santos-Silva AR; Oral Diagnosis Department, Piracicaba Dental School, Piracicaba, Brazil.
J Oral Pathol Med ; 52(10): 980-987, 2023 Nov.
Article en En | MEDLINE | ID: mdl-37712321
ABSTRACT

BACKGROUND:

Dysplasia grading systems for oral epithelial dysplasia are a source of disagreement among pathologists. Therefore, machine learning approaches are being developed to mitigate this issue.

METHODS:

This cross-sectional study included a cohort of 82 patients with oral potentially malignant disorders and correspondent 98 hematoxylin and eosin-stained whole slide images with biopsied-proven dysplasia. All whole-slide images were manually annotated based on the binary system for oral epithelial dysplasia. The annotated regions of interest were segmented and fragmented into small patches and non-randomly sampled into training/validation and test subsets. The training/validation data were color augmented, resulting in a total of 81,786 patches for training. The held-out independent test set enrolled a total of 4,486 patches. Seven state-of-the-art convolutional neural networks were trained, validated, and tested with the same dataset.

RESULTS:

The models presented a high learning rate, yet very low generalization potential. At the model development, VGG16 performed the best, but with massive overfitting. In the test set, VGG16 presented the best accuracy, sensitivity, specificity, and area under the curve (62%, 62%, 66%, and 65%, respectively), associated with the higher loss among all Convolutional Neural Networks (CNNs) tested. EfficientB0 has comparable metrics and the lowest loss among all convolutional neural networks, being a great candidate for further studies.

CONCLUSION:

The models were not able to generalize enough to be applied in real-life datasets due to an overlapping of features between the two classes (i.e., high risk and low risk of malignization).
Asunto(s)
Palabras clave

Texto completo: 1 Colección: 01-internacional Banco de datos: MEDLINE Asunto principal: Aprendizaje Profundo Tipo de estudio: Observational_studies / Prognostic_studies / Risk_factors_studies Límite: Humans Idioma: En Revista: J Oral Pathol Med Asunto de la revista: ODONTOLOGIA / PATOLOGIA Año: 2023 Tipo del documento: Article País de afiliación: Brasil

Texto completo: 1 Colección: 01-internacional Banco de datos: MEDLINE Asunto principal: Aprendizaje Profundo Tipo de estudio: Observational_studies / Prognostic_studies / Risk_factors_studies Límite: Humans Idioma: En Revista: J Oral Pathol Med Asunto de la revista: ODONTOLOGIA / PATOLOGIA Año: 2023 Tipo del documento: Article País de afiliación: Brasil