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Genomic resources for a historical collection of cultivated two-row European spring barley genotypes.
Schreiber, Miriam; Wonneberger, Ronja; Haaning, Allison M; Coulter, Max; Russell, Joanne; Himmelbach, Axel; Fiebig, Anne; Muehlbauer, Gary J; Stein, Nils; Waugh, Robbie.
Afiliación
  • Schreiber M; Division of Plant Sciences, University of Dundee at The James Hutton Institute, Invergowrie, Dundee, Scotland, DD2 5DA, UK.
  • Wonneberger R; Leibniz Institute of Plant Genetics and Crop Plant Research (IPK) Gatersleben, Seeland, Germany.
  • Haaning AM; Department of Agronomy and Plant Genetics, The University of Minnesota, St. Paul, MN, 55108, USA.
  • Coulter M; Division of Plant Sciences, University of Dundee at The James Hutton Institute, Invergowrie, Dundee, Scotland, DD2 5DA, UK.
  • Russell J; Cell and Molecular Sciences, The James Hutton Institute, Invergowrie, Dundee, Scotland, DD2 5DA, UK.
  • Himmelbach A; Leibniz Institute of Plant Genetics and Crop Plant Research (IPK) Gatersleben, Seeland, Germany.
  • Fiebig A; Leibniz Institute of Plant Genetics and Crop Plant Research (IPK) Gatersleben, Seeland, Germany.
  • Muehlbauer GJ; Department of Agronomy and Plant Genetics, The University of Minnesota, St. Paul, MN, 55108, USA.
  • Stein N; Leibniz Institute of Plant Genetics and Crop Plant Research (IPK) Gatersleben, Seeland, Germany.
  • Waugh R; Division of Plant Sciences, University of Dundee at The James Hutton Institute, Invergowrie, Dundee, Scotland, DD2 5DA, UK. Robbie.Waugh@hutton.ac.uk.
Sci Data ; 11(1): 66, 2024 Jan 12.
Article en En | MEDLINE | ID: mdl-38216606
ABSTRACT
Barley genomic resources are increasing rapidly, with the publication of a barley pangenome as one of the latest developments. Two-row spring barley cultivars are intensely studied as they are the source of high-quality grain for malting and distilling. Here we provide data from a European two-row spring barley population containing 209 different genotypes registered for the UK market between 1830 to 2014. The dataset encompasses RNA-sequencing data from six different tissues across a range of barley developmental stages, phenotypic datasets from two consecutive years of field-grown trials in the United Kingdom, Germany and the USA; and whole genome shotgun sequencing from all cultivars, which was used to complement the RNA-sequencing data for variant calling. The outcomes are a filtered SNP marker file, a phenotypic database and a large gene expression dataset providing a comprehensive resource which allows for downstream analyses like genome wide association studies or expression associations.
Asunto(s)

Texto completo: 1 Colección: 01-internacional Banco de datos: MEDLINE Asunto principal: Hordeum / Genoma de Planta Idioma: En Revista: Sci Data Año: 2024 Tipo del documento: Article

Texto completo: 1 Colección: 01-internacional Banco de datos: MEDLINE Asunto principal: Hordeum / Genoma de Planta Idioma: En Revista: Sci Data Año: 2024 Tipo del documento: Article