Genomic resources for a historical collection of cultivated two-row European spring barley genotypes.
Sci Data
; 11(1): 66, 2024 Jan 12.
Article
en En
| MEDLINE
| ID: mdl-38216606
ABSTRACT
Barley genomic resources are increasing rapidly, with the publication of a barley pangenome as one of the latest developments. Two-row spring barley cultivars are intensely studied as they are the source of high-quality grain for malting and distilling. Here we provide data from a European two-row spring barley population containing 209 different genotypes registered for the UK market between 1830 to 2014. The dataset encompasses RNA-sequencing data from six different tissues across a range of barley developmental stages, phenotypic datasets from two consecutive years of field-grown trials in the United Kingdom, Germany and the USA; and whole genome shotgun sequencing from all cultivars, which was used to complement the RNA-sequencing data for variant calling. The outcomes are a filtered SNP marker file, a phenotypic database and a large gene expression dataset providing a comprehensive resource which allows for downstream analyses like genome wide association studies or expression associations.
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1
Colección:
01-internacional
Banco de datos:
MEDLINE
Asunto principal:
Hordeum
/
Genoma de Planta
Idioma:
En
Revista:
Sci Data
Año:
2024
Tipo del documento:
Article