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NMReDATA, a standard to report the NMR assignment and parameters of organic compounds.
Pupier, Marion; Nuzillard, Jean-Marc; Wist, Julien; Schlörer, Nils E; Kuhn, Stefan; Erdelyi, Mate; Steinbeck, Christoph; Williams, Antony J; Butts, Craig; Claridge, Tim D W; Mikhova, Bozhana; Robien, Wolfgang; Dashti, Hesam; Eghbalnia, Hamid R; Farès, Christophe; Adam, Christian; Kessler, Pavel; Moriaud, Fabrice; Elyashberg, Mikhail; Argyropoulos, Dimitris; Pérez, Manuel; Giraudeau, Patrick; Gil, Roberto R; Trevorrow, Paul; Jeannerat, Damien.
Afiliação
  • Pupier M; Department of Organic Chemistry, University of Geneva, 30 Quai E. Ansermet, 1211, Geneva 4, Switzerland.
  • Nuzillard JM; Institut de Chimie Moléculaire de Reims, UMR CNRS 7312, BP 1039, 51687, Reims, Cedex 2, France.
  • Wist J; Chemistry Department, Universidad del Valle, 76001, Cali, Colombia.
  • Schlörer NE; Department of Chemistry, University of Cologne, Greinstr. 4, 50939, Köln, Germany.
  • Kuhn S; Department of Chemistry, University of Cologne, Greinstr. 4, 50939, Köln, Germany.
  • Erdelyi M; Department of Chemistry - BMC, Uppsala University, Husargatan 3, 752 37, Uppsala, Sweden.
  • Steinbeck C; Institute for Inorganic and Analytical Chemistry, Friedrich-Schiller-University, Lessingstr. 8, 07743, Jena, Germany.
  • Williams AJ; National Center for Computational Toxicology, Environmental Protection Agency, 109 T.W. Alexander Drive, Room D131I, Mail Drop D143-02, Research Triangle Park, NC, 27711, USA.
  • Butts C; School of Chemistry, Bristol University, BS8 1TS, Bristol, UK.
  • Claridge TDW; Department of Chemistry, University of Oxford, Chemistry Research Laboratory, Mansfield Road, Oxford, OX1 3TA, UK.
  • Mikhova B; Institute of Organic Chemistry with Centre of Phytochemistry, Bulgarian Academy of Sciences, Akad. G. Bonchev Str. Bl.9, Sofia, 1113, Bulgaria.
  • Robien W; University of Vienna, Department of Organic Chemistry, Währingerstr. 38, 1090, Vienna, Austria.
  • Dashti H; Department of Biochemistry, National Magnetic Resonance Facility at Madison (NMRFAM), 433 Babcock Drive, Madison, WI, USA.
  • Eghbalnia HR; Department of Biochemistry, National Magnetic Resonance Facility at Madison (NMRFAM), 433 Babcock Drive, Madison, WI, USA.
  • Farès C; Max-Planck-Institut für Kohlenforschung, Abteilung NMR, Kaiser-Wilhelm-Platz 1, 45470 Mülheim an der Ruhr, Germany.
  • Adam C; Karlsruhe Institute of Technology, Hermann-von-Helmholtz-Platz 1, 76344, Eggenstein-Leopoldshafen, Germany.
  • Kessler P; Bruker BioSpin GmbH, Silberstreifen, 76287, Rheinstetten, Germany.
  • Moriaud F; Bruker BioSpin AG, Industriestrasse 26, 8117, Fällanden, Switzerland.
  • Elyashberg M; Moscow Department, Advanced Chemistry Development, 6 Akademik Bakulev Street, Moscow, 117513, Russian Federation.
  • Argyropoulos D; Advanced Chemistry Development, Inc. (ACD/Labs), Venture House, Arlington Square, Downshire Way, Bracknell, Berkshire, RG12 1WA, UK.
  • Pérez M; Mestrelab Research, S.L., Feliciano Barrera 9B - Bajo, ES-15706, Santiago de Compostela, Spain.
  • Giraudeau P; EBSI Team, Chimie et Interdisciplinarité: Synthèse, Analyse, Modélisation (CEISAM) CNRS, UMR 6230, Université de Nantes, 92208, 2 rue de la Houssinière, BP, 44322, Nantes, France.
  • Gil RR; Institut Universitaire de France, 1 rue Descartes, 75005, Paris Cedex 05, France.
  • Trevorrow P; Department of Chemistry, Carnegie Mellon University, 4400 Fifth Ave., Pittsburgh, PA, 15213, USA.
  • Jeannerat D; Wiley, The Atrium, Chichester, PO19 8SQ, UK.
Magn Reson Chem ; 56(8): 703-715, 2018 08.
Article em En | MEDLINE | ID: mdl-29656574
ABSTRACT
Even though NMR has found countless applications in the field of small molecule characterization, there is no standard file format available for the NMR data relevant to structure characterization of small molecules. A new format is therefore introduced to associate the NMR parameters extracted from 1D and 2D spectra of organic compounds to the proposed chemical structure. These NMR parameters, which we shall call NMReDATA (for nuclear magnetic resonance extracted data), include chemical shift values, signal integrals, intensities, multiplicities, scalar coupling constants, lists of 2D correlations, relaxation times, and diffusion rates. The file format is an extension of the existing Structure Data Format, which is compatible with the commonly used MOL format. The association of an NMReDATA file with the raw and spectral data from which it originates constitutes an NMR record. This format is easily readable by humans and computers and provides a simple and efficient way for disseminating results of structural chemistry investigations, allowing automatic verification of published results, and for assisting the constitution of highly needed open-source structural databases.
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Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Assunto principal: Compostos Orgânicos / Espectroscopia de Ressonância Magnética / Armazenamento e Recuperação da Informação Idioma: En Revista: Magn Reson Chem Assunto da revista: QUIMICA Ano de publicação: 2018 Tipo de documento: Article País de afiliação: Suíça

Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Assunto principal: Compostos Orgânicos / Espectroscopia de Ressonância Magnética / Armazenamento e Recuperação da Informação Idioma: En Revista: Magn Reson Chem Assunto da revista: QUIMICA Ano de publicação: 2018 Tipo de documento: Article País de afiliação: Suíça