Detalhe da pesquisa
1.
RiboReport - benchmarking tools for ribosome profiling-based identification of open reading frames in bacteria.
Brief Bioinform
; 23(2)2022 03 10.
Artigo
em Inglês
| MEDLINE | ID: mdl-35037022
2.
HRIBO: high-throughput analysis of bacterial ribosome profiling data.
Bioinformatics
; 37(14): 2061-2063, 2021 08 04.
Artigo
em Inglês
| MEDLINE | ID: mdl-33175953
3.
The impact of various seed, accessibility and interaction constraints on sRNA target prediction- a systematic assessment.
BMC Bioinformatics
; 21(1): 15, 2020 Jan 13.
Artigo
em Inglês
| MEDLINE | ID: mdl-31931703
4.
Freiburg RNA tools: a central online resource for RNA-focused research and teaching.
Nucleic Acids Res
; 46(W1): W25-W29, 2018 07 02.
Artigo
em Inglês
| MEDLINE | ID: mdl-29788132
5.
Ribosome profiling reveals the fine-tuned response of Escherichia coli to mild and severe acid stress.
mSystems
; 8(6): e0103723, 2023 Dec 21.
Artigo
em Inglês
| MEDLINE | ID: mdl-37909716
6.
Characterization of the zinc finger µ-protein HVO_0758 from Haloferax volcanii: biological roles, zinc binding, and NMR solution structure.
Front Microbiol
; 14: 1280972, 2023.
Artigo
em Inglês
| MEDLINE | ID: mdl-38094630
7.
Unraveling the small proteome of the plant symbiont Sinorhizobium meliloti by ribosome profiling and proteogenomics.
Microlife
; 4: uqad012, 2023.
Artigo
em Inglês
| MEDLINE | ID: mdl-37223733
8.
Revealing the small proteome of Haloferax volcanii by combining ribosome profiling and small-protein optimized mass spectrometry.
Microlife
; 4: uqad001, 2023.
Artigo
em Inglês
| MEDLINE | ID: mdl-37223747
9.
A global data-driven census of Salmonella small proteins and their potential functions in bacterial virulence.
Microlife
; 1(1): uqaa002, 2020.
Artigo
em Inglês
| MEDLINE | ID: mdl-37223003
10.
IntaRNAhelix-composing RNA-RNA interactions from stable inter-molecular helices boosts bacterial sRNA target prediction.
J Bioinform Comput Biol
; 17(5): 1940009, 2019 10.
Artigo
em Inglês
| MEDLINE | ID: mdl-31856671
11.
uORF-Tools-Workflow for the determination of translation-regulatory upstream open reading frames.
PLoS One
; 14(9): e0222459, 2019.
Artigo
em Inglês
| MEDLINE | ID: mdl-31513641