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1.
Biochim Biophys Acta ; 1851(11): 1417-27, 2015 Nov.
Artigo em Inglês | MEDLINE | ID: mdl-26277409

RESUMO

BACKGROUND: Unique phosphodihydroceramides containing phosphoethanolamine and glycerol have been previously described in Porphyromonas gingivalis. Importantly, they were shown to possess pro-inflammatory properties. Other common human bacteria were screened for the presence of these lipids, and they were found, amongst others, in the oral pathogen Tannerella forsythia. To date, no detailed study into the lipids of this organism has been performed. METHODS: Lipids were extracted, separated and purified by HPTLC, and analyzed using GC-MS, ESI-MS and NMR. Of special interest was how T. forsythia acquires the metabolic precursors for the lipids studied here. This was assayed by radioactive and stable isotope incorporation using carbon-14 and deuterium labeled myo-inositol, added to the growth medium. RESULTS: T. forsythia synthesizes two phosphodihydroceramides (Tf GL1, Tf GL2) which are constituted by phospho-myo-inositol linked to either a 17-, 18-, or 19-carbon sphinganine, N-linked to either a branched 17:0(3-OH) or a linear 16:0(3-OH) fatty acid which, in Tf GL2, is, in turn, ester-substituted with a branched 15:0 fatty acid. T. forsythia lacks the enzymatic machinery required for myo-inositol synthesis but was found to internalize inositol from the medium for the synthesis of both Tf GL1 and Tf GL2. CONCLUSION: The study describes two novel glycolipids in T. forsythia which could be essential in this organism. Their synthesis could be reliant on an external source of myo-inositol. GENERAL SIGNIFICANCE: The effects of these unique lipids on the immune system and their role in bacterial virulence could be relevant in the search for new drug targets.


Assuntos
Bacteroidaceae/metabolismo , Ceramidas/análise , Etanolaminas/análise , Inositol/metabolismo , Bacteroidaceae/química , Radioisótopos de Carbono , Ceramidas/biossíntese , Ceramidas/química , Cromatografia Líquida de Alta Pressão , Deutério , Etanolaminas/química , Etanolaminas/metabolismo , Glicerol/análise , Glicerol/química , Marcação por Isótopo , Extração Líquido-Líquido , Espectroscopia de Ressonância Magnética , Esfingosina/análogos & derivados , Esfingosina/química , Esfingosina/metabolismo
2.
Methods Mol Biol ; 1954: 269-278, 2019.
Artigo em Inglês | MEDLINE | ID: mdl-30864139

RESUMO

The characterization of a recombinant glycosidase can be done with commercially available substrates, which enable testing of enzyme functionality and determination of linkage specificity. Colorimetric assays with p-nitrophenyl substrates provide a relatively simple and fast way of screening conditions which could affect enzyme activity (buffer, pH, ion dependence, temperature). These substrates are useful for the determination of activity optima and the characterization of basic activity parameters. However, testing for linkage specificity should be performed on more complex sugars presenting a range of different glycosidic bonds and might need more sophisticated methods of analysis. This protocol provides comprehensive instructions on how to perform an initial characterization of your glycosidase using a recombinant α-L-fucosidase as an example.


Assuntos
Colorimetria/métodos , Ensaios Enzimáticos/métodos , Tannerella forsythia/enzimologia , alfa-L-Fucosidase/metabolismo , Infecções por Bactérias Gram-Negativas/microbiologia , Humanos , Concentração de Íons de Hidrogênio , Cinética , Nitrofenóis/metabolismo , Proteínas Recombinantes/metabolismo , Especificidade por Substrato
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