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1.
Mol Phylogenet Evol ; 142: 106659, 2020 01.
Artigo em Inglês | MEDLINE | ID: mdl-31639525

RESUMO

A major goal of phylogenetic systematics is to understand both the patterns of diversification and the processes by which these patterns are formed. Few studies have focused on the ancient, species-rich Magnoliales clade and its diversification pattern. Within Magnoliales, the pantropically distributed Annonaceae are by far the most genus-rich and species-rich family-level clade, with c. 110 genera and c. 2,400 species. We investigated the diversification patterns across Annonaceae and identified traits that show varied associations with diversification rates using a time-calibrated phylogeny of 835 species (34.6% sampling) and 11,211 aligned bases from eight regions of the plastid genome (rbcL, matK, ndhF, psbA-trnH, trnL-F, atpB-rbcL, trnS-G, and ycf1). Twelve rate shifts were identified using BAMM: in Annona, Artabotrys, Asimina, Drepananthus, Duguetia, Goniothalamus, Guatteria, Uvaria, Xylopia, the tribes Miliuseae and Malmeeae, and the Desmos-Dasymaschalon-Friesodielsia-Monanthotaxis clade. TurboMEDUSA and method-of-moments estimator analyses showed largely congruent results. A positive relationship between species richness and diversification rate is revealed using PGLS. Our results show that the high species richness in Annonaceae is likely the result of recent increased diversification rather than the steady accumulation of species via the 'museum model'. We further explore the possible role of selected traits (habit, pollinator trapping, floral sex expression, pollen dispersal unit, anther septation, and seed dispersal unit) in shaping diversification patterns, based on inferences of BiSSE, MuSSE, HiSSE, and FiSSE analyses. Our results suggest that the liana habit, the presence of circadian pollinator trapping, androdioecy, and the dispersal of seeds as single-seeded monocarp fragments are closely correlated with higher diversification rates; pollen aggregation and anther septation, in contrast, are associated with lower diversification rates.


Assuntos
Annonaceae/classificação , Annonaceae/genética , Biodiversidade , Genoma de Planta , Filogenia , Plastídeos/genética
2.
Heredity (Edinb) ; 114(3): 309-17, 2015 Mar.
Artigo em Inglês | MEDLINE | ID: mdl-25370212

RESUMO

Cytological studies have shown many newly formed allopolyploids (neoallopolyploids) exhibit chromosomal variation as a result of meiotic irregularities, but few naturally occurring neoallopolyploids have been examined. Little is known about how long chromosomal variation may persist and how it might influence the establishment and evolution of allopolyploids in nature. In this study we assess chromosomal composition in a natural neoallotetraploid, Tragopogon mirus, and compare it with T. miscellus, which is an allotetraploid of similar age (~40 generations old). We also assess whether parental gene losses in T. mirus correlate with entire or partial chromosome losses. Of 37 T. mirus individuals that were karyotyped, 23 (62%) were chromosomally additive of the parents, whereas the remaining 14 individuals (38%) had aneuploid compositions. The proportion of additive versus aneuploid individuals differed from that found previously in T. miscellus, in which aneuploidy was more common (69%; Fisher's exact test, P=0.0033). Deviations from parental chromosome additivity within T. mirus individuals also did not reach the levels observed in T. miscellus, but similar compensated changes were observed. The loss of T. dubius-derived genes in two T. mirus individuals did not correlate with any chromosomal changes, indicating a role for smaller-scale genetic alterations. Overall, these data for T. mirus provide a second example of prolonged chromosomal instability in natural neoallopolyploid populations.


Assuntos
Cromossomos de Plantas/genética , Genética Populacional , Poliploidia , Tragopogon/genética , DNA de Plantas/genética , Evolução Molecular , Rearranjo Gênico , Genoma de Planta , Cariótipo
3.
Heredity (Edinb) ; 114(3): 356-65, 2015 Mar.
Artigo em Inglês | MEDLINE | ID: mdl-25537492

RESUMO

To study the relationship between uniparental rDNA (encoding 18S, 5.8S and 26S ribosomal RNA) silencing (nucleolar dominance) and rRNA gene dosage, we studied a recently emerged (within the last 80 years) allotetraploid Tragopogon mirus (2n=24), formed from the diploid progenitors T. dubius (2n=12, D-genome donor) and T. porrifolius (2n=12, P-genome donor). Here, we used molecular, cytogenetic and genomic approaches to analyse rRNA gene activity in two sibling T. mirus plants (33A and 33B) with widely different rRNA gene dosages. Plant 33B had ~400 rRNA genes at the D-genome locus, which is typical for T. mirus, accounting for ~25% of total rDNA. We observed characteristic expression dominance of T. dubius-origin genes in all organs. Its sister plant 33A harboured a homozygous macrodeletion that reduced the number of T. dubius-origin genes to about 70 copies (~4% of total rDNA). It showed biparental rDNA expression in root, flower and callus, but not in leaf where D-genome rDNA dominance was maintained. There was upregulation of minor rDNA variants in some tissues. The RNA polymerase I promoters of reactivated T. porrifolius-origin rRNA genes showed reduced DNA methylation, mainly at symmetrical CG and CHG nucleotide motifs. We hypothesise that active, decondensed rDNA units are most likely to be deleted via recombination. The silenced homeologs could be used as a 'first reserve' to ameliorate mutational damage and contribute to evolutionary success of polyploids. Deletion and reactivation cycles may lead to bidirectional homogenisation of rRNA arrays in the long term.


Assuntos
Dosagem de Genes , Inativação Gênica , Genes de Plantas , Genes de RNAr , Tragopogon/genética , Metilação de DNA , Evolução Molecular , Dados de Sequência Molecular , Região Organizadora do Nucléolo , Poliploidia , Regiões Promotoras Genéticas , RNA Ribossômico/genética , RNA Ribossômico 18S/genética , RNA Ribossômico 5,8S/genética , Análise de Sequência de DNA , Deleção de Sequência
4.
J Evol Biol ; 25(12): 2470-80, 2012 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-23163328

RESUMO

Tragopogon comprises approximately 150 described species distributed throughout Eurasia from Ireland and the UK to India and China with a few species in North Africa. Most of the species diversity is found in Eastern Europe to Western Asia. Previous phylogenetic analyses identified several major clades, generally corresponding to recognized taxonomic sections, although relationships both among these clades and among species within clades remain largely unresolved. These patterns are consistent with rapid diversification following the origin of Tragopogon, and this study addresses the timing and rate of diversification in Tragopogon. Using BEAST to simultaneously estimate a phylogeny and divergence times, we estimate the age of a major split and subsequent rapid divergence within Tragopogon to be ~2.6 Ma (and 1.7-5.4 Ma using various clock estimates). Based on the age estimates obtained with BEAST (HPD 1.7-5.4 Ma) for the origin of crown group Tragopogon and 200 estimated species (to accommodate a large number of cryptic species), the diversification rate of Tragopogon is approximately 0.84-2.71 species/Myr for the crown group, assuming low levels of extinction. This estimate is comparable in rate to a rapid Eurasian radiation in Dianthus (0.66-3.89 species/Myr), which occurs in the same or similar habitats. Using available data, we show that subclades of various plant taxa that occur in the same semi-arid habitats of Eurasia also represent rapid radiations occurring during roughly the same window of time (1.7-5.4 Ma), suggesting similar causal events. However, not all species-rich plant genera from the same habitats diverged at the same time, or at the same tempo. Radiations of several other clades in this same habitat (e.g. Campanula, Knautia, Scabiosa) occurred at earlier dates (45-4.28 Ma). Existing phylogenetic data and diversification estimates therefore indicate that, although some elements of these semi-arid communities radiated during the Plio-Pleistocene period, other clades sharing the same habitat appear to have diversified earlier.


Assuntos
Especiação Genética , Tragopogon/genética , Ásia , Europa (Continente) , Filogenia
6.
Heredity (Edinb) ; 103(1): 73-81, 2009 Jul.
Artigo em Inglês | MEDLINE | ID: mdl-19277058

RESUMO

Whole-genome duplication (polyploidisation) is a widespread mechanism of speciation in plants. Over time, polyploid genomes tend towards a more diploid-like state, through downsizing and loss of duplicated genes (homoeologues), but relatively little is known about the timing of gene loss during polyploid formation and stabilisation. Several studies have also shown gene transcription to be affected by polyploidisation. Here, we examine patterns of gene loss in 10 sets of homoeologues in five natural populations of the allotetraploid Tragopogon miscellus that arose within the past 80 years following independent whole-genome duplication events. We also examine 44 first-generation synthetic allopolyploids of the same species. No cases of homoeologue loss arose in the first allopolyploid generation, but after 80 years, 1.6% of homoeologues were lost in natural populations. For seven homoeologue sets we also examined transcription, finding that 3.4% of retained homoeologues had been silenced in the natural populations, but none in the synthetic plants. The homoeologue losses and silencing events found were not fixed within natural populations and did not form a predictable pattern among populations. We therefore show haphazard loss and silencing of homoeologues, occurring within decades of polyploid formation in T. miscellus, but not in the initial generation.


Assuntos
Deleção de Genes , Inativação Gênica , Poliploidia , Tragopogon/genética , Genes Sintéticos , Genoma de Planta , Dados de Sequência Molecular
7.
Mol Ecol ; 17(23): 5157-74, 2008 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-19120994

RESUMO

Hybridization and/or incomplete sorting of ancestral polymorphism are commonly implicated to explain discordant phylogenetic analyses of closely related species complexes. One genus in which these phenomena have been suggested to have played major roles based on phylogenetic data is Conradina, a genus of mints (Lamiaceae) endemic to the southeastern USA containing several endangered species. The goals of this study were to use microsatellite data to better understand patterns of genetic structure in Conradina, to test hypotheses of recent or ancient hybridization and incomplete lineage sorting, and to clarify species boundaries. Individuals from 55 populations representing all Conradina species were genotyped using 10 microsatellite loci. Analyses of the patterns of genetic structure in Conradina revealed a clear differentiation of populations following recognized species boundaries, indicating that species have diverged from one another genetically and interspecific hybridization has not occurred recently. Neither ancient hybridization nor incomplete lineage sorting is supported as the sole cause of species nonmonophyly, suggesting that both may have contributed to patterns found in phylogenetic trees; however, analyses of other types of data may be more appropriate to distinguish between these two hypotheses. Because all described species appear to be valid entities, the current listing status of most endangered species of Conradina is appropriate; however, populations of Conradina canescens are genetically differentiated into three groups, each of which may merit species status, and several recently discovered populations of Conradina in Dunn's Creek State Park in Florida are highly differentiated genetically and also appear to represent a new species.


Assuntos
Especiação Genética , Hibridização Genética , Lamiaceae/genética , Teorema de Bayes , Conservação dos Recursos Naturais , DNA de Plantas/genética , Evolução Molecular , Genótipo , Repetições de Microssatélites , Filogenia , Polimorfismo Genético , Análise de Sequência de DNA , Especificidade da Espécie , Estados Unidos
8.
J Evol Biol ; 26(2): 291-3, 2013 Feb.
Artigo em Inglês | MEDLINE | ID: mdl-23324011
9.
Genetics ; 169(2): 931-44, 2005 Feb.
Artigo em Inglês | MEDLINE | ID: mdl-15654116

RESUMO

We investigated concerted evolution of rRNA genes in multiple populations of Tragopogon mirus and T. miscellus, two allotetraploids that formed recurrently within the last 80 years following the introduction of three diploids (T. dubius, T. pratensis, and T. porrifolius) from Europe to North America. Using the earliest herbarium specimens of the allotetraploids (1949 and 1953) to represent the genomic condition near the time of polyploidization, we found that the parental rDNA repeats were inherited in roughly equal numbers. In contrast, in most present-day populations of both tetraploids, the rDNA of T. dubius origin is reduced and may occupy as little as 5% of total rDNA in some individuals. However, in two populations of T. mirus the repeats of T. dubius origin outnumber the repeats of the second diploid parent (T. porrifolius), indicating bidirectional concerted evolution within a single species. In plants of T. miscellus having a low rDNA contribution from T. dubius, the rDNA of T. dubius was nonetheless expressed. We have apparently caught homogenization of rDNA repeats (concerted evolution) in the act, although it has not proceeded to completion in any allopolyploid population yet examined.


Assuntos
DNA Ribossômico/genética , Evolução Molecular , Matriz Nuclear/química , Poliploidia , Tragopogon/genética , Cromossomos de Plantas , DNA de Plantas , Diploide , Genes de RNAr , Genética Populacional , Genoma de Planta , Geografia , Hibridização in Situ Fluorescente , Dados de Sequência Molecular , Polimorfismo Conformacional de Fita Simples , Mapeamento por Restrição , Sementes/crescimento & desenvolvimento , Tragopogon/citologia , Tragopogon/crescimento & desenvolvimento
10.
Genetics ; 130(3): 639-47, 1992 Mar.
Artigo em Inglês | MEDLINE | ID: mdl-1551582

RESUMO

Interpopulational gene flow within a species can reduce population differentiation due to genetic drift, whereas genetic exchange among taxa can impede speciation. We used allozyme data to estimate gene flow within and among geographic races and species of perennial herbs in the Ipomopsis aggregata complex (Polemoniaceae). Estimates of interpopulational gene flow within taxa from two methods (F statistics and private alleles) were correlated with one another. Gene flow among populations within each geographic race (subspecies) of I. aggregata was relatively high (Nm greater than approximately 1.0). Gene flow was also high among populations of I. arizonica and among four northern populations of I. tenuituba. However, gene flow was low (Nm less than 1.0) for I. tenuituba when a population representing subsp. macrosiphon was included. This is consistent with previous findings that subsp. macrosiphon has had an independent origin and is reproductively, as well as geographically, isolated. A recently developed model, based on hierarchical F statistics, was employed to estimate genetic exchange among taxa. Gene flow estimates were generally high among races of I. aggregata (dNmrace greater than 1.0) but were low among subspecies of I. tenuituba (dNmrace less than 1.0). Consistent with morphological evidence, estimates of interspecific gene flow were moderate between I. aggregata and I. tenuituba, which hybridize in several areas. However, contrary to morphological evidence, we estimated relatively high levels of interspecific gene flow involving I. arizonica. Our results suggest that I. arizonica has hybridized with other species without the transfer of morphological traits.(ABSTRACT TRUNCATED AT 250 WORDS)


Assuntos
Frequência do Gene , Variação Genética , Isoenzimas/genética , Modelos Genéticos , Plantas/enzimologia , Plantas/genética , Especificidade da Espécie
11.
Genetics ; 121(4): 819-26, 1989 Apr.
Artigo em Inglês | MEDLINE | ID: mdl-17246492

RESUMO

Few studies of cpDNA have provided evolutionary and/or phylogenetic information at the intraspecific level. We analyzed restriction site variation using 19 endonucleases in 37 populations representing both diploid (2n = 14) and autotetraploid (2n = 28) Tolmiea menziesii. Seven restriction site mutations and five length mutations were observed. Although diploid and tetraploid Tolmiea have been intensively studied using nuclear markers, cpDNA variation provided additional evolutionary insights not revealed previously. The chloroplast genomes of diploid and tetraploid Tolmiea are as distinct as those of many pairs of congeneric species of angiosperms. Based on outgroup comparisons, the primitive chloroplast genome is present in tetraploid rather than diploid Tolmiea. These findings suggest that either: (1) diploid and tetraploid Tolmiea may have diverged since the origin of the autotetraploid, (2) the original diploid donor of the cytoplasm present in the tetraploid subsequently became extinct, or (3) the diploid was actually derived from the tetraploid via polyhaploidy. cpDNA variation also revealed that despite their close geographic proximity, diploid and tetraploid Tolmiea do not experience cytoplasmic gene flow. Last, three cytoplasmically distinct groups of diploid populations exist, two of which occupy distinct geographic areas. These findings demonstrate that, at least in some plant species, restriction fragment analysis of cpDNA can provide important evolutionary and phylogenetic information at low taxonomic levels.

12.
Artigo em Inglês | MEDLINE | ID: mdl-19687140

RESUMO

Multiple origins of the same polyploid species pose the question: Does evolution repeat itself in these independently formed lineages? Tragopogon is a unique evolutionary model for the study of recent and recurrent allopolyploidy. The allotetraploids T. mirus (T. dubius x T. porrifolius) and T. miscellus (T. dubius x T. pratensis) formed repeatedly following the introduction of three diploids to the United States. Concerted evolution has consistently occurred in the same direction (resulting in loss of T. dubius rDNA copies). Both allotetraploids exhibit homeolog loss, with the same genes consistently showing loss, and homeologs of T. dubius preferentially lost in both allotetraploids. We have also documented repeated patterns of tissue-specific silencing in multiple populations of T. miscellus. Hence, some aspects of genome evolution may be "hardwired," although the general pattern of loss is stochastic within any given population. On the basis of the study of F(1) hybrids and synthetics, duplicate gene loss and silencing do not occur immediately following hybridization or polyploidization, but gradually and haphazardly. Genomic approaches permit analysis of hundreds of loci to assess the frequency of homeolog loss and changes in gene expression. This methodology is particularly promising for groups such as Tragopogon for which limited genetic and genomic resources are available.


Assuntos
Evolução Biológica , Especiação Genética , Poliploidia , DNA de Plantas/genética , DNA Ribossômico/genética , Diploide , Evolução Molecular , Inativação Gênica , Genoma de Planta , Genômica , Hibridização Genética , Modelos Genéticos , Tragopogon/classificação , Tragopogon/genética , Estados Unidos
13.
Mol Ecol Resour ; 8(2): 363-6, 2008 Mar.
Artigo em Inglês | MEDLINE | ID: mdl-21585793

RESUMO

We report the isolation of microsatellite loci from three species in the genus Conradina (Lamiaceae). To ensure their utility for multiple species, loci were screened for amplification and variability in all six Conradina species; 11 loci demonstrated high levels of amplification and polymorphism in most species. These 11 loci were characterized in 20 individuals from one population of Conradina brevifolia; alleles per locus ranged from five to 15, and observed heterozygosity ranged from 0.30 to 0.90. These microsatellites will be used to clarify species limits, detect interspecific hybridization, and understand the partitioning of genetic variation in each species of Conradina.

14.
Ann Bot ; 95(1): 207-17, 2005 Jan.
Artigo em Inglês | MEDLINE | ID: mdl-15596468

RESUMO

BACKGROUND AND AIMS: DNA C-values in land plants (comprising bryophytes, lycophytes, monilophytes, gymnosperms and angiosperms) vary approximately 1000-fold from approx. 0.11 to 127.4 pg. To understand the evolutionary significance of this huge variation it is essential to evaluate the phylogenetic component. Recent increases in C-value data (e.g. Plant DNA C-values database; release 2.0, January 2003; http://www.rbgkew.org.uk/cval/homepage.html) together with improved consensus of relationships between and within land plant groups makes such an analysis timely. METHODS: Insights into the distribution of C-values in each group of land plants were gained by superimposing available C-value data (4119 angiosperms, 181 gymnosperms, 63 monilophytes, 4 lycophytes and 171 bryophytes) onto phylogenetic trees. To enable ancestral C-values to be reconstructed for clades within land plants, character-state mapping with parsimony and MacClade was also applied. KEY RESULTS AND CONCLUSIONS: Different land plant groups are characterized by different C-value profiles, distribution of C-values and ancestral C-values. For example, the large ( approximately 1000-fold) range yet strongly skewed distribution of C-values in angiosperms contrasts with the very narrow 12-fold range in bryophytes. Further, character-state mapping showed that the ancestral genome sizes of both angiosperms and bryophytes were reconstructed as very small (i.e. < or =1.4 pg) whereas gymnosperms and most branches of monilophytes were reconstructed with intermediate C-values (i.e. >3.5, <14.0 pg). More in-depth analyses provided evidence for several independent increases and decreases in C-values; for example, decreases in Gnetaceae (Gymnosperms) and heterosperous water ferns (monilophytes); increases in Santalales and some monocots (both angiosperms), Pinaceae, Sciadopityaceae and Cephalotaxaceae (Gymnosperms) and possibly in the Psilotaceae + Ophioglossaceae clade (monilophytes). Thus, in agreement with several focused studies within angiosperm families and genera showing that C-values may both increase and decrease, it is apparent that this dynamic pattern of genome size evolution is repeated on a broad scale across land plants.


Assuntos
DNA de Plantas/genética , Evolução Molecular , Genoma de Planta , Plantas/genética , Briófitas/genética , Núcleo Celular/genética , Cycadopsida/genética , DNA de Plantas/análise , Magnoliopsida/genética , Filogenia
15.
Theor Appl Genet ; 73(1): 88-93, 1986 Nov.
Artigo em Inglês | MEDLINE | ID: mdl-24240753

RESUMO

Interspecific heritability values were estimated using parent-offspring regression analyses for 11 morphological traits differentiating Clarkia nitens and C. speciosa subsp. polyantha. Estimates ranged from near 0 for anther color and germination percentage, to 0.8 for calyx length and petal tip color. Phenotypic, genetic, and environmental correlation matrices were computed to determine the extent of interspecific correlations of traits. Cluster analyses of the genetic and environmental correlation matrices each resulted in three clusters of correlated traits; however, the clusters derived from the two matrices were different. The clusters produced by analysis of the environmental correlation matrix were similar to the factors obtained from principal component analysis of the phenotypic correlation matrix. Genetic correlations may result from strong linkage due to interspecific chromosomal differences.

16.
Theor Appl Genet ; 87(7): 773-81, 1994 Feb.
Artigo em Inglês | MEDLINE | ID: mdl-24190462

RESUMO

A restriction-site analysis of chloroplast DNA (cpDNA) variation in Lens was conducted to: (1) assess the levels of variation in Lens culinaris ssp. culinaris (the domesticated lentil), (2) identify the wild progenitor of the domesticated lentil, and (3) construct a cpDNA phylogeny of the genus. We analyzed 399 restriction sites in 114 cultivated accessions and 11 wild accessions. All but three accessions of the cultivar had identical cpDNAs. Two accessions exhibited a single shared restriction-site loss, and a small insertion was observed in the cpDNA of a third accession. We detected 19 restriction-site mutations and two length mutations among accessions of the wild taxa. Three of the four accessions of L. culinaris ssp. orientalis were identical to the cultivars at every restriction site, clearly identifying ssp. orientalis as the progenitor of the cultivated lentil. Because of its limited cpDNA diversity, we conclude that either the cultivated lentil has passed through a genetic bottleneck during domestication and lost most of its cytoplasmic variability or else was domesticated from an ancestor that was naturally depauperate in cpDNA restriction-site variation. However, because we had access to only a small number of populations of the wild taxa, the levels of variation present in ssp. orientalis can only be estimated, and the extent of such a domestication bottleneck, if applicable, cannot be evaluated. The cpDNA-based phylogeny portrays Lens as quite distinct from its putative closest relative, Vicia montbretii. L. culinaris ssp. odemensis is the sister of L. nigricans; L. culinaris is therefore paraphyletic given the current taxonomic placement of ssp. odemensis. Lens nigricans ssp. nigricans is by far the most divergent taxon of the genus, exhibiting ten autapomorphic restriction-site mutations.

17.
Mol Phylogenet Evol ; 2(2): 166-70, 1993 Jun.
Artigo em Inglês | MEDLINE | ID: mdl-8025723

RESUMO

Nuclear ribosomal RNA genes provide markers for retrieving phylogeny at a variety of taxonomic levels. The internal transcribed spacers (ITS), separating the coding regions, evolve relatively rapidly and may be useful for reconstructing phylogenies at the specific and generic levels. ITS-1, located between the 18S and 5.8S genes, may be especially valuable at the species level and below. However, despite the promise that this region holds for studies below the species level, few studies have addressed levels of ITS-1 variability within and among conspecific populations of plants. To assess the apportionment of ITS-1 sequence variation, a hierarchical sampling strategy was used to compare sequences from individuals within and among populations of Lomatium grayi and L. laevigatum, widespread and restricted congeners of the Umbelliferae, respectively. ITS-1 is 209 bp in length in L. grayi and 200 bp in L. laevigatum. No sequence variation in ITS-1 was observed within populations of either species, and a single population of the more widespread L. grayi differed from the other seven populations by two base substitutions for a sequence divergence of 1.0%. Sequence divergence between L. laevigatum and the common ITS-1 sequence of L. grayi was 1.5%; that between L. laevigatum and the variant of L. grayi was 2.5%. ITS-1 sequences in Lomatium are less variable than either allozymes or chloroplast DNA and do not appear to provide a valuable source of intraspecific markers for population-level studies.(ABSTRACT TRUNCATED AT 250 WORDS)


Assuntos
DNA Ribossômico , Variação Genética , Plantas/genética , Sequência de Bases , DNA , Dados de Sequência Molecular , Filogenia , Plantas/classificação , RNA Ribossômico/genética
18.
Heredity (Edinb) ; 84 ( Pt 4): 410-5, 2000 Apr.
Artigo em Inglês | MEDLINE | ID: mdl-10849064

RESUMO

Polyploidization has long been recognized as an important force in the diversification of plants. Theoretical models predict that polyploids may be expected to exhibit higher rates of self-fertilization than do closely related diploid species. Wild populations of the neopolyploid Tragopogon mirus (4n) exhibited slightly higher rates of outcrossing than did populations of one of its progenitors, T. dubius (2n). In the current study, outcrossing rates in populations of T. dubius and T. mirus were estimated using artificial arrays constructed to maximize the chances of detecting outcrossing events. The artificial diploid population is more highly outcrossing (t=0.727; family-level estimates range from 0.00 to 1. 32) than the tetraploid population (t=0.591; family-level estimates range from 0.00 to 1.14), although the difference between them is not statistically significant. The results of this study, combined with those of the previous work on wild populations, suggest that mating systems in these species vary more among populations than between ploidal levels. This could be because of the relatively recent origins of the tetraploid species; there may have been insufficient time since the formations of the tetraploids for shifts in mating systems to occur.


Assuntos
Asteraceae/genética , Diploide , Poliploidia , Alelos , Asteraceae/crescimento & desenvolvimento , Genética Populacional , Fenômenos Fisiológicos Vegetais , Reprodução/genética , Sementes/crescimento & desenvolvimento
19.
Am J Bot ; 87(6): 783-92, 2000 Jun.
Artigo em Inglês | MEDLINE | ID: mdl-10860909

RESUMO

Rare species are typically considered to maintain low levels of genetic variation, and this view has been supported by several reviews of large numbers of isozyme studies. Although these reviews have provided valuable data on levels of variability in plant species in general, and rare species in particular, these broad overviews involve comparisons that may confound the effects of rarity with a multitude of other factors that affect genetic variability. Additionally, the statistical analyses employed assume the data to be independent, which is not the case for organisms that share a common phylogenetic history. As the role of evolutionary history and historical constraints has become better understood, more researchers have studied widespread congeners when investigating the genetic diversity of rare species in an effort to control for these effects. We summarize the available data from such studies, comparing for rare and widespread congeners (1) the levels of genetic variability at the population and species levels and (2) measures of population substructuring. At the population level, we summarized data for percentage polymorphic loci (%P(pop)), mean number of alleles per locus (A(pop)), and observed heterozygosity (H(o)). Species-level measures used were percentage polymorphic loci (%P(spp)), mean number of alleles per locus (A(spp)), and total genetic diversity (H(T)). Indices of population subdivision (either F(ST) or G(ST)) were also examined. Using Wilcoxon signed rank tests, we found significant, but small, differences between rare and widespread species for all diversity measures except H(T). However, there does not appear to be a difference between rare and widespread congeners in terms of how genetic variation is partitioned within and among populations. Levels of diversity, for all measures examined, between rare and widespread congeners are highly correlated.

20.
Proc Natl Acad Sci U S A ; 97(13): 7051-7, 2000 Jun 20.
Artigo em Inglês | MEDLINE | ID: mdl-10860970

RESUMO

In 1950, G. Ledyard Stebbins devoted two chapters of his book Variation and Evolution in Plants (Columbia Univ. Press, New York) to polyploidy, one on occurrence and nature and one on distribution and significance. Fifty years later, many of the questions Stebbins posed have not been answered, and many new questions have arisen. In this paper, we review some of the genetic attributes of polyploids that have been suggested to account for the tremendous success of polyploid plants. Based on a limited number of studies, we conclude: (i) Polyploids, both individuals and populations, generally maintain higher levels of heterozygosity than do their diploid progenitors. (ii) Polyploids exhibit less inbreeding depression than do their diploid parents and can therefore tolerate higher levels of selfing; polyploid ferns indeed have higher levels of selfing than do their diploid parents, but polyploid angiosperms do not differ in outcrossing rates from their diploid parents. (iii) Most polyploid species are polyphyletic, having formed recurrently from genetically different diploid parents. This mode of formation incorporates genetic diversity from multiple progenitor populations into the polyploid "species"; thus, genetic diversity in polyploid species is much higher than expected by models of polyploid formation involving a single origin. (iv) Genome rearrangement may be a common attribute of polyploids, based on evidence from genome in situ hybridization (GISH), restriction fragment length polymorphism (RFLP) analysis, and chromosome mapping. (v) Several groups of plants may be ancient polyploids, with large regions of homologous DNA. These duplicated genes and genomes can undergo divergent evolution and evolve new functions. These genetic and genomic attributes of polyploids may have both biochemical and ecological benefits that contribute to the success of polyploids in nature.

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