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Nucleic Acids Res ; 45(19): 11437-11448, 2017 Nov 02.
Artigo em Inglês | MEDLINE | ID: mdl-28981683

RESUMO

The speed at which a molecular motor operates is critically important for the survival of a virus or an organism but very little is known about the underlying mechanisms. Tailed bacteriophage T4 employs one of the fastest and most powerful packaging motors, a pentamer of gp17 that translocates DNA at a rate of up to ∼2000-bp/s. We hypothesize, guided by structural and genetic analyses, that a unique hydrophobic environment in the catalytic space of gp17-adenosine triphosphatase (ATPase) determines the rate at which the 'lytic water' molecule is activated and OH- nucleophile is generated, in turn determining the speed of the motor. We tested this hypothesis by identifying two hydrophobic amino acids, M195 and F259, in the catalytic space of gp17-ATPase that are in a position to modulate motor speed. Combinatorial mutagenesis demonstrated that hydrophobic substitutions were tolerated but polar or charged substitutions resulted in null or cold-sensitive/small-plaque phenotypes. Quantitative biochemical and single-molecule analyses showed that the mutant motors exhibited 1.8- to 2.5-fold lower rate of ATP hydrolysis, 2.5- to 4.5-fold lower DNA packaging velocity, and required an activator protein, gp16 for rapid firing of ATPases. These studies uncover a speed control mechanism that might allow selection of motors with optimal performance for organisms' survival.


Assuntos
Adenosina Trifosfatases/metabolismo , Bacteriófago T4/metabolismo , Empacotamento do DNA , DNA Viral/metabolismo , Proteínas Virais/metabolismo , Adenosina Trifosfatases/genética , Trifosfato de Adenosina/metabolismo , Aminoácidos/química , Aminoácidos/genética , Aminoácidos/metabolismo , Bacteriófago T4/genética , Sítios de Ligação/genética , Domínio Catalítico/genética , DNA Viral/química , DNA Viral/genética , Proteínas de Ligação a DNA/química , Proteínas de Ligação a DNA/genética , Proteínas de Ligação a DNA/metabolismo , Hidrólise , Modelos Moleculares , Mutação , Domínios Proteicos , Proteínas Virais/química , Proteínas Virais/genética , Montagem de Vírus/genética
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