Cardiovascular physiology of decapod crustaceans: from scientific inquiry to practical applications.

Until recently, the decapod crustacean heart was regarded as a simple, single ventricle, contraction of which forces haemolymph out into seven arteries. Differential tissue perfusion is achieved by contraction and relaxation of valves at the base of each artery. In this Review, we discuss recent work that has shown that the heart is bifurcated by muscular sheets that may effectively divide the single ventricle into 'chambers'. Preliminary research shows that these chambers may contract differentially; whether this enables selective tissue perfusion remains to be seen. Crustaceans are unusual in that they can stop their heart for extended periods. These periods of cardiac arrest can become remarkably rhythmic, accounting for a significant portion of the cardiac repertoire. As we discuss in this Review, in crustaceans, changes in heart rate have been used extensively as a measurement of stress and metabolism. We suggest that the periods of cardiac pausing should also be quantified in this context. In the past three decades, an exponential increase in crustacean aquaculture has occurred and heart rate (and changes thereof) is being used to understand the stress responses of farmed crustaceans, as well as providing an indicator of disease progression. Furthermore, as summarized in this Review, heart rate is now being used as an effective indicator of humane methods to anaesthetize, stun or euthanize crustaceans destined for the table or for use in scientific research. We believe that incorporation of new biomedical technology and new animal welfare policies will guide future research directions in this field.

Offspring thermal demands and parental brooding efficiency differ for precocial birds living in contrasting climates.

BACKGROUND: Chicks of precocial birds hatch well-developed and can search actively for food but their homeothermy develops gradually during growth. This makes them dependent on heat provided by parents ("brooding"), which is then traded off against other activities, mainly foraging. Although brooding has been documented in many precocial birds, little is known about the differences in the amount and efficiency of brooding care, brooding diel rhythmicity, and impact on the chick's growth, particularly between species living in different climatic conditions. RESULTS: We used multisensory dataloggers to evaluate brooding patterns in two congeneric species inhabiting contrasting climate zones: temperate Northern lapwing (Vanellus vanellus) and desert Red-wattled lapwing (Vanellus indicus). In accordance with our expectation, the adult desert lapwings brooded the chicks slightly less compared to the adult temperate lapwings. However, the desert lapwings brooded their chicks in higher ambient temperatures and less efficiently (i.e. they could not reach the same brooding temperature as the temperate lapwings), which are new and hitherto unknown brooding patterns in precocial birds. In both species, night brooding prevailed even during warm nights, suggesting a general brooding rule among birds. Although the high rates of brooding can reduce the time spent by foraging, we found no negative effect of the high brooding rate on the growth rate in either species. CONCLUSIONS: Our data suggest that the chicks of species breeding in colder climates may reduce their thermal demands, while their parents may increase the efficiency of parental brooding care. More research is however needed to confirm this as a rule across species.

Microclimatic conditions mediate the effect of deadwood and forest characteristics on a threatened beetle species, Tragosoma depsarium.

While climate change has increased the interest in the influence of microclimate on many organisms, species inhabiting deadwood have rarely been studied. Here, we explore how characteristics of forest stands and deadwood affect microclimate inside deadwood, and analyse how this affects wood-living organisms, exemplified by the red-listed beetle Tragosoma depsarium. Deadwood and forest variables explained much of the variation in temperature, but less of the variation in moisture within deadwood. Several variables known to influence habitat quality for deadwood-dependent species were found to correlate with microclimate. Standing deadwood and an open canopy generates warmer conditions in comparison to downed logs and a closed canopy, and shaded, downed and large-diameter wood have higher moisture and more stable daily temperatures than sun-exposed, standing, and small-diameter wood. T. depsarium occupancy and abundance increased with colder and more stable winter temperatures, and with higher spring temperatures. Consistently, the species occurred more frequently in deadwood items with characteristics associated with these conditions, i.e. downed large-diameter logs occurring in open conditions. Conclusively, microclimatic conditions were found to be important for a deadwood-dependent insect, and related to characteristics of both forest stands and deadwood items. Since microclimate is also affected by macroclimatic conditions, we expect species' habitat requirements to vary locally and regionally, and to change due to climate warming. Although many saproxylic species preferring sun-exposed conditions would benefit from a warmer climate per se, changes in species interactions and land use may still result in negative net effects of climate warming.

Data Acquisition System for On-the-Go Soil Resistance Force Sensor Using Soil Cutting Blades.

Worldwide, agricultural land is a dominant part of the environment. It is very important to understand the physical properties of soil because they directly or indirectly affect the entire human population. This paper proposes a data acquisition system for an original design of the soil resistance force sensor (SRFS). It serves to evaluate the properties of soil affected and unaffected by tractor passages through the field. The SRSF uses two cutting blades to measure soil mechanical resistance within the tire track and outside the tire track. The proposed system consists of two load cells, datalogger, power supply and software for personal computers. The system was practically tested under field operation. The results showed significant differences between the soil resistance force measured outside the tire track and within the tire track after one, two and three tractor passages. The data were compared with penetrometer resistance and soil bulk density, standardly characterizing soil mechanical resistance. An increase of soil resistance force after one, two and three tractor passages corresponded with an increase in reference parameters. The results showed that the proposed system is suitable for practical applications to evaluate soil mechanical resistance using SRFS.

Multimodal Functional Analysis Platform: 3. Spherical Treadmill System for Small Animals.

In the application of advanced neuroscience techniques including optogenetics to small awake animals, it is often necessary to restrict the animal's movements. A spherical treadmill is a beneficial option that enables virtual locomotion of body- or head-restrained small animals. Besides, it has a wide application range, including virtual reality experiments. This chapter describes the fundamentals of a spherical treadmill for researchers who want to start experiments with it. First, we describe the physical aspect of a spherical treadmill based on the simple mechanical analysis. Next, we explain the basics of data logging and preprocessing for behavioral analysis. We also provide simple computer programs that work for the purpose.

Evaluation of Long-Term Performance of a Solar Home System (SHS) Monitoring System on Harsh Environments.

Dataloggers installed in rural regions of developing countries need to be autonomous, robust, and have good recording capacity as they may be exposed to harsh environmental conditions. An extremely hot, dry, and dusty climate can imply additional wear and tear toequipment. A test procedurewas designed and run in a confined space to control climate conditions to test the datalogger. An outdoor campaign lasting more than three years was performed at the Instituto Madrileño de Estudios Avanzados (IMDEA) Water Institute, in Alcalá de Henares (Madrid, Spain) and at the Escuela Politécnica Superior (EPS) Linares (Jaén, Spain) to test the low-cost datalogger under real conditions. The results demonstrated that it was robust and endured extreme weather conditions. In order to avoid the loss of data, a new version with a redundant system based on an SD card was implemented and tested under real conditions.

Supraclavicular skin temperature measured by iButtons and 18F-fluorodeoxyglucose uptake by brown adipose tissue in adults.

Currently, 18 [F]-Fluorodeoxyglucose (18F-FDG) in combination with a positron emission tomography/computed tomography (PET/CT) scan analysis is the most commonly used method to quantify human BAT volume and activity. However, this technique presents several drawbacks which negatively affect participant's health. The aim of the present work is to determine whether supraclavicular skin temperature can be used as an indirect marker of cold-induced BAT and skeletal muscle 18F-FDG uptake in adults, while taking into account body composition. We performed a personalized cooling protocol just before an 18F-FDG-PET/CT scan, and we measured supraclavicular skin temperature before (in warm conditions) and after the cooling protocol in 88 adults (n = 57 women, mean age: 21.9 ±â€¯2.1 years old, body mass index: 24.5 ±â€¯4.3 km/m2). We found that supraclavicular skin temperature at the warm and cold periods was weakly and positively associated with BAT activity (SUVmean and SUVpeak: ß = 3.000; R2 = 0.072; P = 0.022 and ß = 2.448; R2 = 0.060; P = 0.021), but not with skeletal muscle 18F-FDG uptake, after controlling for body composition. We performed further analyses and the positive associations persisted only in the group of women. In conclusion, supraclavicular skin temperature in warm and cold conditions seems to be related with cold-induced 18F-FDG uptake by BAT only in women, although the low explained variance of these associations means that there are other factors involved in the supraclavicular skin temperature.

Further miniaturisation of the Thermochron iButton to create a thermal bio-logger weighing 0.3 g.

Thermochron iButtons are commonly used by thermal biologists to continuously measure body temperature from animals. However, if unmodified, these devices are of a size that limits their use with very small animals. To allow iButtons to be used to study smaller species, methods to miniaturise them by 61% have been previously described. We present a method to reduce iButton mass by a further 71%. The modified devices have a shorter battery life, but the minimum size of vertebrates able to carry the devices is reduced from 28.9 g to 6.6 g, if the arbitrary, yet widely cited, maximum of 5% body mass for attached devices is adhered to. We demonstrate the application of our method by recording surface temperatures of captive and wild skinks and show that captive cockroaches weighing 0.8 g are also able to carry the device. We believe this to be the first time that temperature data have been recorded from an insect in this way.

Metabolic rates and the energetic cost of external tag attachment in juvenile blacktip sharks Carcharhinus limbatus.

This study reports on the metabolic rate of the blacktip shark Carcharhinus limbatus and the energetic costs of external tag attachment. Metabolic rates, swimming speed and tail-beat (BT ) frequency were measured in a static respirometer with untagged animals and animals equipped with a small data logger. Tagged sharks showed significantly higher routine oxygen consumption and lower swimming speeds than untagged animals, indicating that tagging significantly affected the swimming efficiency and energetic requirements in these small sharks, and that these effects must be accounted for when interpreting telemetry data from free-ranging individuals.

Factors affecting temperature variation and habitat use in free-ranging diamondback terrapins.

Measuring the thermal conditions of aquatic reptiles with temperature dataloggers is a cost-effective way to study their behavior and habitat use. Temperature dataloggers are a particularly useful and informative approach to studying organisms such as the estuarine diamondback terrapin (Malaclemys terrapin) that inhabits a dynamic environment often inaccessible to researchers. We used carapace-mounted dataloggers to measure hourly carapace temperature (Tc) of free-ranging terrapins in South Carolina from October 2007 to 2008 to examine the effects of month, sex, creek site, and tide on Tc and to determine the effects of month, sex, and time of day on terrapin basking frequency. Simultaneous measurements of environmental temperatures (Te; shallow mud, deep mud, water) allowed us to make inferences about terrapin microhabitat use. Terrapin Tc differed significantly among months and creek and between sexes. Terrapin microhabitat use also varied monthly, with shallow mud temperature being the best predictor of Tc November-March and water temperature being the best predictor of Tc April-October. Terrapins basked most frequently in spring and fall and males basked more frequently than females. Our study contributes to a fuller understanding of terrapin thermal biology and provides support for using dataloggers to investigate behavior and habitat use of aquatic ectotherms inhabiting dynamic environments.

Development of an Inertial Measurement Unit (IMU) with datalogger and geopositioning for mapping the Earth's magnetic field.

The Earth's magnetic field is used in various navigation systems, but this field has a dynamic behavior that can be affected by different physical factors in local environments. These factors can pose risks to navigation systems and at the same time be a signal of a phenomenon that needs to be investigated, such as mineral concentration or the presence of interference from electrical equipment, among others. For that reason, in this project, this system was designed and integrated using a low-cost, military-grade magnet inductive magnetometer, which is integrated into two Inertial Measurement Units to corroborate the movement data, and at the same time a geopositioning system to georeference the sensor measurements. The information is managed by an MCU, which also stores data on an SD card. The system includes a lithium battery management system to provide more than an hour of autonomy. Wireless communication systems are intentionally avoided to prevent interference, and an infrared transmission LED is included instead, in case the real-time transmission is necessary. The results show that the proposed system allows for obtaining maps of magnetic field intensity in open spaces, and this information can be used to determine regions with anomalies.

The Electronic Bee Spy: Eavesdropping on Honeybee Communication via Electrostatic Field Recordings.

As a canary in a coalmine warns of dwindling breathable air, the honeybee can indicate the health of an ecosystem. Honeybees are the most important pollinators of fruit-bearing flowers, and share similar ecological niches with many other pollinators; therefore, the health of a honeybee colony can reflect the conditions of a whole ecosystem. The health of a colony may be mirrored in social signals that bees exchange during their sophisticated body movements such as the waggle dance. To observe these changes, we developed an automatic system that records and quantifies social signals under normal beekeeping conditions. Here, we describe the system and report representative cases of normal social behavior in honeybees. Our approach utilizes the fact that honeybee bodies are electrically charged by friction during flight and inside the colony, and thus they emanate characteristic electrostatic fields when they move their bodies. These signals, together with physical measurements inside and outside the colony (temperature, humidity, weight of the hive, and activity at the hive entrance) will allow quantification of normal and detrimental conditions of the whole colony. The information provided instructs how to setup the recording device, how to install it in a normal bee colony, and how to interpret its data.

Field Physiology: Studying Organismal Function in the Natural Environment.

Continuous physiological measurements collected in field settings are essential to understand baseline, free-ranging physiology, physiological range and variability, and the physiological responses of organisms to disturbances. This article presents a current summary of the available technologies to continuously measure the direct physiological parameters in the field at high-resolution/instantaneous timescales from freely behaving animals. There is a particular focus on advantages versus disadvantages of available methods as well as emerging technologies "on the horizon" that may have been validated in captive or laboratory-based scenarios but have yet to be applied in the wild. Systems to record physiological variables from free-ranging animals are reviewed, including radio (VHF/UFH) telemetry, acoustic telemetry, and dataloggers. Physiological parameters that have been continuously measured in the field are addressed in seven sections including heart rate and electrocardiography (ECG); electromyography (EMG); electroencephalography (EEG); body temperature; respiratory, blood, and muscle oxygen; gastric pH and motility; and blood pressure and flow. The primary focal sections are heart rate and temperature as these can be, and have been, extensively studied in free-ranging organisms. Predicted aspects of future innovation in physiological monitoring are also discussed. The article concludes with an overview of best practices and points to consider regarding experimental designs, cautions, and effects on animals. © 2021 American Physiological Society. Compr Physiol 11:1979-2015, 2021.

Temperature integrity and exposure of vaccines to suboptimal temperatures in cold chain devices at different levels in three states of India.

OBJECTIVE: To document the temperature integrity at the vaccine storage devices at various levels in three states of India. METHODS: A total of 213 health facilities including 196 facilities (district and sub-district levels) from 27 select districts and 17 division or state level vaccine stores in three states were included. At these facilities, temperature in 223 vaccine storage devices was recorded for at least 7 consecutive days using electronic temperature datalogger. RESULTS: During the observation period, overall the vaccines were exposed to temperature < 0 °C for 14.8% of the storage time with 8.6, 6.7 and 18% at state/division, district and sub-district vaccine stores, respectively. The vaccines were also exposed to temperature > 8 °C for 6.6% of the storage time including 1.3, 13 and 5.1% at state/division, district and sub-district vaccine stores, respectively. Continuous episodes of temperature deviation for 45 min or longer to < 0 °C and > 8 °C was observed in 7.2 and 6.4% of the observation period, respectively. These temperature deviations were not captured by the routine temperature monitoring practice. CONCLUSION: The vaccines were exposed to freezing temperature for a considerable period at all level stores, which was more than the exposure to higher temperature. To ensure vaccine potency and immunogenicity, stringent temperature integrity maintenance is needed at all levels.

Estimating crime scene temperatures from nearby meteorological station data.

The importance of temperature data in minimum postmortem interval (minPMI) estimations in criminal investigations is well known. To maximise the accuracy of minPMI estimations, it is imperative to investigate the different components involved in temperature modelling, such as the duration of temperature data logger placement at the crime scene and choice of nearest weather station to compare the crime scene data to. Currently, there is no standardised practice on how long to leave the temperature data logger at the crime scene and the effects of varying logger duration are little known. The choice of the nearest weather station is usually made based on availability and accessibility of data from weather stations in the crime scene vicinity. However, there are no guidelines on what to look for to maximise the comparability of weather station and crime scene temperatures. Linear regression analysis of scene data with data from weather stations with varying time intervals, distances, altitudes and microclimates showed the greatest goodness of fit (R2), i.e. the highest compatibility between datasets, after 4-10 days. However, there was no significant improvement in estimation of crime scene temperatures beyond a 5-day regression period. The smaller the distance between scene and weather station and the higher the similarity in environment, such as altitude and geographical area, resulted in greater compatibility between datasets. Overall, the study demonstrated the complexity of choosing the most comparable weather station to the crime scene, especially because of a high variation in seasonal temperature and numerous influencing factors such as geographical location, urban 'heat island effect' and microclimates. Despite subtle differences, for both urban and rural areas an optimal data fit was generally reached after about five consecutive days within a radius of up to 30 km of the 'crime scene'. With increasing distance and differing altitudes, a lower overall data fit was observed, and a diminishing increase in R2 values was reached after 4-10 consecutive days. These results demonstrate the need for caution regarding distances and climate differences when using weather station data for retrospective regression analyses for estimating temperatures at crime scenes. However, the estimates of scene temperatures from regression analysis were better than simply using the temperatures from the nearest weather station. This study provides recommendations for data logging duration of operation, and a baseline for further research into producing standard guidelines for increasing the accuracy of minPMI estimations and, ultimately, greater robustness of forensic entomology evidence in court.

Temperatus® software: A new tool to efficiently manage the massive information generated by iButtons.

An iButton is a temperature sensor of small dimensions (button-sized; 16 × 6 mm2), relatively low cost (˜US50$), with a stable and autonomous system that measures temperature and records the data in a protected memory section. These devices are used in different fields and the company offers a software (One-Wire Viewer) with several limitations. The present study describes Temperatus® software with the main aim of making the task of programming, downloading, and analysing the massive amount of data generated by iButtons smoothly, intuitive, time-efficient, and user-friendly.

ONEIROS, a new miniature standalone device for recording sleep electrophysiology, physiology, temperatures and behavior in the lab and field.

BACKGROUND: Sleep is an inactive state of reduced environmental awareness shared by all animals. When compared to wakefulness, sleep behavior is associated with changes in physiology and brain activity. The nature of these changes varies considerably across species, and therefore is a rich resource for gaining insight into the evolution and functions of sleep. A major obstacle to capitalizing on this resource is the lack of a small device capable of recording multiple biological parameters for extended periods of time both in the laboratory and the field. NEW METHOD: ONEIROS is a new tool designed for conducting sleep research on small, freely moving animals. The miniature, standalone system is capable of recording up to 26 electrophysiological signals (electroencephalogram, electromyogram, electrooculogram, electrocardiogram), metabolic (3 temperature channels) and behavior via an accelerometer for several days. In addition, the device is equipped with a vibrating motor which can be used to assess arousal thresholds and to disrupt sleep. The system is available in telemetric or data-logger configuration useable in the field. RESULTS: To demonstrate the efficacy of this tool, we simultaneously recorded for the first time, electroencephalogram, hippocampal local field potential, electromyogram, electrooculogram, brain, body and ambient temperature, and 3D accelerometry. We also deprived rats of paradoxical sleep by triggering the vibrating motor after online recognition of the state. Finally, by successfully recording a pigeon in an 8 m3 aviary in a social context with the device in the logger configuration, we demonstrate the feasibility of using the device in the field.

Equipamento de baixo custo para monitoramento de pressões em sistemas de abastecimento de água / Low cost equipment for monitoring pressures in water supply systems

RESUMO A importância de se monitorar as pressões no sistema de abastecimento de água aliada ao alto custo de implementação e manutenção de dispositivos capazes disso corroboraram ao objetivo deste estudo. Sendo assim, buscou-se desenvolver um equipamento de baixo custo para monitorar a pressão da água. Para isso, produziu-se 15 MPR dataloggers, custando R$ 208,15 cada, que foram aferidos com um equipamento comercial. Os equipamentos foram instalados em residências de distintos perfis de consumo e altitudes do município de Lucas do Rio Verde, no estado de Mato Grosso, por 43 dias. De modo geral, os resultados obtidos foram satisfatórios, promissores e demonstraram o equipamento robusto e preciso, com R2 de 0,9986 quando comparado com o equipamento comercial, além de ter sido possível avaliar o sistema de abastecimento da cidade e as intervenções necessárias.

ABSTRACT The importance of monitoring the pressures in the water supply system combined with the high cost of implementation and maintenance of devices capable of this, corroborated the objective of this study. Therefore, we seek to develop low-cost equipment to measure water pressure. For this, 15 MPR dataloggers were produced, costing R$ 208.15 each, calibrated with a commercial equipment. The equipment were installed in residences with different consumptions profiles and altitudes in the municipality of Lucas do Rio Verde, Mato Grosso, for 43 days. The results obtained were satisfied, promising, and showed that the equipment is robust and precise with a R² of 0.9986 when compared with the commercial equipment, in addition to being possible to evaluate the city's supply system and the necessary interventions.

PARduino: a simple and inexpensive device for logging photosynthetically active radiation.

Photosynthetically active radiation (PAR, 400-700 nm) is one of the primary controls of forest carbon and water relations. In complex terrain, PAR has high spatial variability. Given the high cost of commercial datalogging equipment, spatially distributed measurements of PAR have been typically modeled using geographic coordinates and terrain indices. Here, we present a design for a low-cost, field-deployable device for measuring and recording PAR built around an Arduino microcontroller-named PARduino. PARduino provides for widely distributed sensor arrays and tests the feasibility of using open-source, hobbyist-grade electronics for collecting scientific data. PARduino components include a quantum sensor, an EME Systems signal converter/amplifier and an Arduino Pro Mini microcontroller. Additional components include a real-time clock, a microSD Flash memory card and a custom printed circuit board. The components were selected for ease of assembly. We found strong agreement between the PARduino datalogger system and National Institute of Standards and Technology traceable sensors logged by an industry standard datalogger (slope = 0.99, SE < 0.01, P < 0.01; intercept = - 14.84, SE = 0.78, P < 0.01). The average difference between the two systems was 22.0 µmol m(-2) s(-1) with PARduino typically underestimating PAR. The average percentage difference between systems was 3.49%. On average, PARduino performed within the factory absolute calibration of the PAR sensor; however, larger errors occurred at low PAR levels. Using open-source technologies such as this can make it possible to develop a spatially distributed sensor network within the constraints of a typical research budget.

Smartphones in ecology and evolution: a guide for the app-rehensive.

Smartphones and their apps (application software) are now used by millions of people worldwide and represent a powerful combination of sensors, information transfer, and computing power that deserves better exploitation by ecological and evolutionary researchers. We outline the development process for research apps, provide contrasting case studies for two new research apps, and scan the research horizon to suggest how apps can contribute to the rapid collection, interpretation, and dissemination of data in ecology and evolutionary biology. We emphasize that the usefulness of an app relies heavily on the development process, recommend that app developers are engaged with the process at the earliest possible stage, and commend efforts to create open-source software scaffolds on which customized apps can be built by nonexperts. We conclude that smartphones and their apps could replace many traditional handheld sensors, calculators, and data storage devices in ecological and evolutionary research. We identify their potential use in the high-throughput collection, analysis, and storage of complex ecological information.